메뉴 건너뛰기




Volumn 11, Issue 6, 2010, Pages 2425-2430

Early detection of population fragmentation using linkage disequilibrium estimation of effective population size

Author keywords

Bottleneck; Connectivity; Conservation; Effective population size; Fragmentation; Linkage disequilibrium; Monitoring; Ne

Indexed keywords

COMPUTER SIMULATION; CONNECTIVITY; EFFECTIVE POPULATION SIZE; ENVIRONMENTAL MONITORING; GENE FLOW; GENETIC MARKER; HABITAT FRAGMENTATION; HABITAT LOSS; POPULATION BOTTLENECK; POPULATION DYNAMICS; POPULATION ESTIMATION; POPULATION SIZE; WILD POPULATION;

EID: 78049362245     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-010-0112-x     Document Type: Article
Times cited : (47)

References (26)
  • 2
    • 0034952180 scopus 로고    scopus 로고
    • EasyPop (version 1.7): a computer program for population genetics simulations
    • Balloux F (2001) EasyPop (version 1. 7): a computer program for population genetics simulations. J Hered 92: 301-302.
    • (2001) J Hered , vol.92 , pp. 301-302
    • Balloux, F.1
  • 3
    • 0030478757 scopus 로고    scopus 로고
    • Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
    • Cornuet J-M, Luikart G (1996) Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144: 2001-2014.
    • (1996) Genetics , vol.144 , pp. 2001-2014
    • Cornuet, J.-M.1    Luikart, G.2
  • 4
    • 33745043543 scopus 로고    scopus 로고
    • Estimating effective population size from linkage disequilibrium: severe bias using small samples
    • England PR, Cornuet J-M, Berthier P, Tallmon DA, Luikart G (2006) Estimating effective population size from linkage disequilibrium: severe bias using small samples. Conserv Genet 7: 303-308.
    • (2006) Conserv Genet , vol.7 , pp. 303-308
    • England, P.R.1    Cornuet, J.-M.2    Berthier, P.3    Tallmon, D.A.4    Luikart, G.5
  • 5
    • 0002577818 scopus 로고    scopus 로고
    • Microsatellites and minisatellites for molecular ecology
    • G. Carvalho (Ed.), Amsterdam: IOS Press
    • Estoup A, Angers B (1998) Microsatellites and minisatellites for molecular ecology. In: Carvalho G (ed) Advances in molecular ecology. IOS Press, Amsterdam, pp 55-86.
    • (1998) Advances in Molecular Ecology , pp. 55-86
    • Estoup, A.1    Angers, B.2
  • 6
    • 23444437361 scopus 로고    scopus 로고
    • Genetics and extinction
    • Frankham R (2005) Genetics and extinction. Biol Conserv 126: 131-140.
    • (2005) Biol Conserv , vol.126 , pp. 131-140
    • Frankham, R.1
  • 8
    • 0019771734 scopus 로고
    • Estimation of effective population size from data on linkage disequilibrium
    • Hill WG (1981) Estimation of effective population size from data on linkage disequilibrium. Genet Res Camb 38: 209-216.
    • (1981) Genet Res Camb , vol.38 , pp. 209-216
    • Hill, W.G.1
  • 9
    • 33645676302 scopus 로고    scopus 로고
    • Genetic approaches for estimating the effective size of populations
    • Leberg P (2005) Genetic approaches for estimating the effective size of populations. J Wildl Manag 69: 1385-1399.
    • (2005) J Wildl Manag , vol.69 , pp. 1385-1399
    • Leberg, P.1
  • 10
    • 0033000982 scopus 로고    scopus 로고
    • Temporal changes in allele frequencies provide estimates of population bottleneck size
    • Luikart G, Cornuet J-M, Allendorf FW (1999) Temporal changes in allele frequencies provide estimates of population bottleneck size. Conserv Biol 13: 523-530.
    • (1999) Conserv Biol , vol.13 , pp. 523-530
    • Luikart, G.1    Cornuet, J.-M.2    Allendorf, F.W.3
  • 11
    • 0015891902 scopus 로고
    • Linkage disequilibrium in subdivided populations
    • Nei M, Li W-H (1973) Linkage disequilibrium in subdivided populations. Genetics 75: 213-219.
    • (1973) Genetics , vol.75 , pp. 213-219
    • Nei, M.1    Li, W.-H.2
  • 12
    • 65549150328 scopus 로고    scopus 로고
    • Estimation of effective number of breeders from molecular coancestry of single cohort sample
    • Nomura T (2008) Estimation of effective number of breeders from molecular coancestry of single cohort sample. Evol Appl 1: 462-474.
    • (2008) Evol Appl , vol.1 , pp. 462-474
    • Nomura, T.1
  • 13
    • 33845750144 scopus 로고    scopus 로고
    • The genetic effective and adult census sixe of an Australian population of tiger prawns (Penaeus esculentus)
    • Ovenden JR, Peel D, Street R, Courtney AJ, Hoyle SD, Peel S, Podlich H (2007) The genetic effective and adult census sixe of an Australian population of tiger prawns (Penaeus esculentus). Mol Ecol 16: 127-138.
    • (2007) Mol Ecol , vol.16 , pp. 127-138
    • Ovenden, J.R.1    Peel, D.2    Street, R.3    Courtney, A.J.4    Hoyle, S.D.5    Peel, S.6    Podlich, H.7
  • 14
    • 0000159977 scopus 로고    scopus 로고
    • Review of DNA-based census and effective population size estimators
    • Schwartz MK, Tallmon DA, Luikart G (1998) Review of DNA-based census and effective population size estimators. Anim Conserv 1: 293-299.
    • (1998) Anim Conserv , vol.1 , pp. 293-299
    • Schwartz, M.K.1    Tallmon, D.A.2    Luikart, G.3
  • 15
    • 38949178372 scopus 로고    scopus 로고
    • OneSamp: a program to estimate effective population size using approximate Bayesian computation
    • Tallmon DA, Koyuk A, Luikart G, Beaumont MA (2008) OneSamp: a program to estimate effective population size using approximate Bayesian computation. Mol Ecol Resour 8: 299-301.
    • (2008) Mol Ecol Resour , vol.8 , pp. 299-301
    • Tallmon, D.A.1    Koyuk, A.2    Luikart, G.3    Beaumont, M.A.4
  • 16
    • 0035108501 scopus 로고    scopus 로고
    • Estimation of effective population size and migration rate 22 from one- and two-locus identity measures
    • Vitalis R, Couvet D (2001) Estimation of effective population size and migration rate 22 from one- and two-locus identity measures. Genetics 157: 911-925.
    • (2001) Genetics , vol.157 , pp. 911-925
    • Vitalis, R.1    Couvet, D.2
  • 17
    • 31344454299 scopus 로고    scopus 로고
    • Estimation of effective population sizes from data on genetic markers
    • Wang J (2005) Estimation of effective population sizes from data on genetic markers. Philos Trans R Soc B 360: 1395-1409.
    • (2005) Philos Trans R Soc B , vol.360 , pp. 1395-1409
    • Wang, J.1
  • 18
    • 65549163137 scopus 로고    scopus 로고
    • A new method for estimating effective population size from a single sample of multilocus genotypes
    • Wang J (2009) A new method for estimating effective population size from a single sample of multilocus genotypes. Mol Ecol 18: 2148-2164.
    • (2009) Mol Ecol , vol.18 , pp. 2148-2164
    • Wang, J.1
  • 19
    • 33644878743 scopus 로고    scopus 로고
    • Genetic estimates of contemporary effective population size: to what time periods do the estimates apply?
    • Waples RS (2005) Genetic estimates of contemporary effective population size: to what time periods do the estimates apply? Mol Ecol 14: 3335-3352.
    • (2005) Mol Ecol , vol.14 , pp. 3335-3352
    • Waples, R.S.1
  • 20
    • 33745015584 scopus 로고    scopus 로고
    • A bias correction for estimates of effective population size based on linkage disequilibrium at unlinked gene loci
    • Waples RS (2006) A bias correction for estimates of effective population size based on linkage disequilibrium at unlinked gene loci. Conserv Genet 7(2): 167-184.
    • (2006) Conserv Genet , vol.7 , Issue.2 , pp. 167-184
    • Waples, R.S.1
  • 21
    • 47249162403 scopus 로고    scopus 로고
    • LdNe: a program for estimating effective population size from data on linkage disequilibrium
    • Waples RS, Do C (2008) LdNe: a program for estimating effective population size from data on linkage disequilibrium. Mol Ecol Resour 8: 753-756.
    • (2008) Mol Ecol Resour , vol.8 , pp. 753-756
    • Waples, R.S.1    Do, C.2
  • 22
    • 77954278662 scopus 로고    scopus 로고
    • e using highly variable genetic markers: a largely untapped resource for applied conservation and evolution
    • e using highly variable genetic markers: a largely untapped resource for applied conservation and evolution. Evol Appl 3: 244-262.
    • (2010) Evol Appl , vol.3 , pp. 244-262
    • Waples, R.S.1    Do, C.2
  • 23
    • 0018332021 scopus 로고
    • Inferences about linkage disequilibrium
    • Weir BS (1979) Inferences about linkage disequilibrium. Biometrics 35: 235-254.
    • (1979) Biometrics , vol.35 , pp. 235-254
    • Weir, B.S.1
  • 24
    • 0001771498 scopus 로고
    • Evolution in Mendelian populations
    • Wright S (1931) Evolution in Mendelian populations. Genetics 16: 97-159.
    • (1931) Genetics , vol.16 , pp. 97-159
    • Wright, S.1
  • 26
    • 33745922899 scopus 로고    scopus 로고
    • Experimental habitat fragmentation increases linkage disequilibrium but does not affect genetic diversity or population structure in the Amazonian liverwort Radula flaccida
    • Zartman CE, McDaniel SF, Shaw J (2006) Experimental habitat fragmentation increases linkage disequilibrium but does not affect genetic diversity or population structure in the Amazonian liverwort Radula flaccida. Mol Ecol 15: 2305-2315.
    • (2006) Mol Ecol , vol.15 , pp. 2305-2315
    • Zartman, C.E.1    McDaniel, S.F.2    Shaw, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.