Assessing genetic diversity of Canada Thistle (Cirsium arvense) in North America with microsatellites

Weed Science

Volumn 58, Issue 4, 2010, Pages 387-394

  Bodo Slotta, Tracey A ^a   Foley, Michael E ^a   Chao, Shaioman ^a   Hufbauer, Ruth A ^b   Horvath, David P ^a  

^a U S DEPARTMENT OF AGRICULTURE   (United States)

^b Veterinary Dentistry and Oral Surgery   (United States)

Author keywords

Canada thistle; Cirsium arvense; genetic diversity; invasive species; microsatellites

Indexed keywords

GENE FLOW; GENETIC ANALYSIS; GENETIC MARKER; GENETIC STRUCTURE; GENETIC VARIATION; GENOTYPE; HUMAN ACTIVITY; INVASIVE SPECIES; SEXUAL REPRODUCTION; WEED; WEED CONTROL;

ENGLAND; NORTH AMERICA; UNITED KINGDOM;

CIRSIUM; CIRSIUM ARVENSE;

EID: 78049342316     PISSN: 00431745     EISSN: None     Source Type: Journal    
DOI: 10.1614/WS-D-09-00070.1     Document Type: Article

References (42)

1. Arnett, A. E. and S. M. Louda. 2002. Re-test of Rhinocyllus conicus host specificity and the prediction of ecological risk in biological control. Biol. Conserv. 106:251-257.
2. Bossard, C. C., J. M. Randall, and M. C. Hoshovsky. 2000. Invasive Plants of California?s Wildlands. Berkeley: University of California Press.
3. Bruckart, W. L., D. J. Poltis, G. De Fago, S. S. Rosenthal, and D. M. Supkoff. 1996. Susceptibility of Carduus, Cirsium and Cynara scolymus species artificially inoculated with Puccinia carduorum from musk thistle. Biol. Control 6:215-221.
4. Chakraborty, R. 1990. Mitochondrial DNA polymorphism reveals hidden heterogeneity within some Asian populations. Am. J. Hum. Genet. 47:87-94.
5. Donald, W. W. 1994. The biology of Canada thistle (Cirsium arvense). Rev. Weed Sci. 6:77-101.
6. Donnelly, M. J., M. C. Licht, and T. Lehmann. 2001. Evidence for recent population expansion in the evolutionary history of the malarial vectors Anopheles arabiensis and Anopheles gambiae. Mol. Biol. Evol. 18:1353-1364.
7. Excoffier, L. and H.E.L. Lischer. 2010. Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows. Mol. Ecol. Resour. In press.
8. Gaskin, J. F., D. Y. Zhang, and M. C. Mon. 2005. Invasion of Lepidium draba (Brassicaceae) in the Western United States: distributions and origins of chloroplast haplotypes. Mol. Ecol. 14:2331-2341.
9. Guo, S. W. and E. A. Thompson. 1992. Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics 48:361-372.
10. Guske, S., B. Schultz, and C. Boyle. 2004. Biocontrol options for Cirsium arvense with indigenous fungal pathogens. Weed Res. 44:107-116.
11. Harpending, H. C. 1994. Signature of ancient population growth in low-resolution mitochondrial DNA mismatch distribution. Human Biol. 66:591-600.
12. Heimann, B. and G. W. Cussans. 1996. The importance of seeds and sexual reproduction in the population biology of Cirsium arvense-a literature review. Weed Res. 36:493-503.
13. Hettwer, U. and B. Gerowitt. 2004. An investigation of genetic variation in Cirsium arvense field patches. Weed Res. 44:289-297.
14. Hodgson, J. M. 1968. The nature, ecology, and control of Canada thistle. Washington, DC: U.S. Department of Agriculture, Agricultural Research Service, Tech. Bull. 1386.
15. Holm, L. G., D. L. Plucknett, J. V. Pancho, and J. P. Herberger. 1977. The World?s Worst Weeds-Distribution and Biology. Honolulu: University of Hawaii Press.
16. Jasieniuk, M. and B. D. Maxwell. 2001. Plant diversity: new insights from molecular biology and genomics technologies. Weed Sci. 49:257-265.
17. Jensen, J. L., A. J. Bohonak, and S. T. Kelley. 2005. Isolation by distance, web service. BMC Gen 6, 13. v.3.15. http://ibdws.sdsu.edu/.
18. Jump, A. S., D. H. Dawson, C. M. James, F. I. Woodward, and T. Burke. 2002. Isolation of polymorphic microsatellites in the stemless thistle (Cirsium acaule) and their utility in other Cirsium species. Mol. Ecol. Notes 2:589-592.
19. Jump, A. S., F. I. Woodward, and T. Burke. 2003. Cirsium species show disparity in patterns of genetic variation at their range-edge, despite similar patterns of reproduction and isolation. New Phytol. 160:359-370.
20. Kelch, D. G. and B. G. Baldwin. 2003. Phylogeny and ecological radiation of New World thistles (Cirsium, Cardueae-Compositae) based on ITS and ETS r DNA sequence data. Mol Ecol. 12:141-151.
21. Lambrinos, J. G. 2004. How interactions between ecology and evolution influence contemporary invasion dynamics. Ecol. 85:2061-2070.
22. Marrs, R. A., R. Sforza, and R. A. Hufbauer. 2008. Evidence for multiple introductions of Centaurea stoebe micranthos (spotted knapweed, Asteraceae) to North America. Mol. Ecol. 17:4197-4208.
23. McClay, A. S. 2002. Canada thistle. Page 413 in R. Van Driesche, B. Blossey, M. Hoddle, S. Lyon, and R. Reardon. Biological control of invasive plants in the Eastern United States. U.S. Department of Agriculture Forest Service Publication FHTET-2002-04.
24. Moore, R. J. 1975. The biology of Canadian weeds. 13. Cirsium arvense (L.) Scop. Can J Plant Sci. 55:1033-1048.
25. Müller-Schärer, H., U. Schaffner, and T. Seinger. 2004. Evolution in invasive plants, implications for biological control. Trends Ecol Evol. 19:417-422.
26. Nei, M. 1987. Molecular Evolutionary Genetics. New York, NY: Columbia University Press.
27. Parker, J. D., D. E. Burkepile, and M. E. Hay. 2006. Opposing effects of native and exotic herbivores on plant invasions. Science 311:1459-1461.
28. Pritchard, J. K., M. Stephens, and P. Donnelly. 2000. Inference of population structure using multilocus genotype data. Genetics 155:945-959.
29. Rand, T. A. and S. M. Louda. 2004. Exotic weed invasion increases the susceptibility of native plants to attack by a biocontrol herbivore. Ecology 85:1548-1554.
30. Rogers, A. R. and H. Harpending. 1992. Population growth makes waves in the distribution of pairwise genetic differences. Mol. Biol. Evol. 9:552-569.
31. Schneider, S., D. Roessli, and L. Excoffier. 2000. Arelquin Version 2.000: A Software for Population Genetics Analysis. Geneva, Switzerland: Genetics and Biometry Laboratory, University of Geneva.
32. Slatkin, M. 1994. An exact test for neutrality based on the Ewens sampling distribution. Genet. Res. 64:71-74.
33. Slotta, T.A.B. 2008. What we know about weeds: insights from genetic markers. Weed Sci. 56:322-326.
34. Slotta, T.A.B., L. Brady, and S. Chao. 2008. High throughput tissue preparation for large-scale genotyping experiments. Mol. Ecol. Res. 8:83-87.
35. Slotta, T.A.B., D. P. Horvath, and M. E. Foley. 2005. Development of polymorphic markers for Cirsium arvense, Canada thistle, and their amplification in closely related taxa. Mol. Ecol. Notes 5:917-919.
36. Slotta, T.A.B., J. M. Rothhouse, D. P. Horvath, and M. E. Foley. 2006. Genetic diversity of Canada thistle (Cirsium arvense) in North Dakota. Weed Sci. 54:1080-1085.
37. Solé, M., W. Durka, S. Eber, and R. Brandl. 2004. Genotypic and genetic diversity of the common weed Cirsium arvense (Asteraceae). Int. J. Plant Sci. 165:437-444.
38. Swofford, D. L. 2001. PAUP* Phylogenetic Analysis Using Parsimony, ver. 4.0b10. Sunderland, MA: Sinauer Associates.
39. U.S. Department of Agriculture, Natural Resources Conservation Service. 2005. The PLANTS Database, version 3.5 (http://plants.usda.gov). Data compiled from various sources by Mark W. Skinner. Baton Rouge, LA: National Plant Data Center.
40. Watterson, G. 1978. The homozygosity test of neutrality. Genetics 88:405-417.
41. Weeds of Alaska Database 2005. Database of exotic vegetation collected in Alaska. University of Alaska, Alaska Natural Heritage Program-US Forest Service-National Park Service Database. http://akweeds.uaa.alaska.edu/. Accessed: June 7, 2010.
42. Yeh, F. C., R. C. Yang, and T. Boyle. 1999. Pop Gene ver. 1.31, Microsoft Window-based Freeware for Population Genetic Analysis. Free program distributed by the authors. http://www.ualberta.ca/, fyeh/. Accessed: June 7, 2010.