SQUAMOSA promoter-binding protein-like transcription factors: Star players for plant growth and development

Journal of Integrative Plant Biology

Volumn 52, Issue 11, 2010, Pages 946-951

  Chen, Xiaobo ^a   Zhang, Zenglin ^a   Liu, Danmei ^a   Zhang, Kai ^a   Li, Aili ^a   Mao, Long ^a  

^a INSTITUTE OF PLANT PROTECTION   (China)

Author keywords

[No Author keywords available]

Indexed keywords

DNA BINDING PROTEIN; GIBBERELLIN; TRANSCRIPTION FACTOR;

GROWTH; JUVENILE; PLANT; PROTEIN; RNA;

GENETICS; GROWTH, DEVELOPMENT AND AGING; HISTOLOGY; METABOLISM; PLANT; PLANT LEAF; PROMOTER REGION; REVIEW;

DNA-BINDING PROTEINS; GIBBERELLINS; PLANT LEAVES; PLANTS; PROMOTER REGIONS, GENETIC; TRANSCRIPTION FACTORS;

ARABIDOPSIS;

EID: 77958543118     PISSN: 16729072     EISSN: 17447909     Source Type: Journal    
DOI: 10.1111/j.1744-7909.2010.00987.x     Document Type: Review

References (39)

1. Arazi T, Talmor-Neiman M, Stav R, Riese M, Huijser P, Baulcombe DC (2005) Cloning and characterization of micro-RNAs from moss. Plant J. 43, 837-848.
2. Becraft PW, Bongard-Pierce DK, Sylvester AW, Poethig RS, Freeling M (1990) The LIGULELESS-1 gene acts tissue specifically in maize leaf development. Dev. Biol. 141, 220-232.
3. Benlloch R, Berbel A, Serrano-Mislata A, Madueno F (2007) Floral initiation and inflorescence architecture: a comparative view. Ann. Bot. 100, 659-676.
4. Birkenbihl RP, Jach G, Saedler H, Huijser P (2005) Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains. J. Mol. Biol. 352, 585-596.
5. Cardon G, Hohmann S, Klein J, Nettesheim K, Saedler H, Huijser P (1999) Molecular characterisation of the Arabidopsis SBP-box genes. Gene 237, 91-104.
6. Cardon GH, Hohmann S, Nettesheim K, Saedler H, Huijser P (1997) Functional analysis of the Arabidopsis thaliana SBP-box gene SPL3: a novel gene involved in the floral transition. Plant J. 12, 367-377.
7. Chuck G, Meeley R, Irish E, Sakai H, Hake S (2007) The maize tasselseed4 microRNA controls sex determination and meristem cell fate by targeting Tasselseed6/indeterminate spikelet1. Nat. Genet. 39, 1517-1521.
8. Eriksson M, Moseley JL, Tottey S, Del Campo JA, Quinn J, Kim Y, Merchant S (2004) Genetic dissection of nutritional copper signaling in chlamydomonas distinguishes regulatory and target genes. Genetics 168, 795-807.
9. Fornara F, Coupland G (2009) Plant phase transitions make a SPLash. Cell 138, 625-627.
10. Gandikota M, Birkenbihl R, Hhmann S, Cardon G, Saedler H, Huijser P (2007) The miRNA156/157 recognition element in the 3'UTR of the Arabidopsis SBP box gene SPL3 prevents early flowering by translational inhibition in seedlings. Plant J. 49, 683-693.
11. Guo J, Song J, Wang F, Zhang XS (2008) Genome-wide identification and expression analysis of rice cell cycle genes. Plant Mol. Biol. 64, 349-360.
12. Jiao Y, Wang Y, Xue D, Wang J, Yan M, Liu G, Dong G, Zeng D, Lu Z, Zhu X, Qian Q, Li J (2010) Regulation of OsSPL14 by OsmiR156 defines ideal plant architecture in rice. Nat. Genet. 42, 541-544.
13. Klein J, Saedler H, Huijser P (1996) A new family of DNA binding proteins includes putative transcriptional regulators of the Antirrhinum majus floral meristem identity gene SQUAMOSA. Mol. Gen. Genet. 250, 7-16.
14. Kropat J, Tottey S, Birkenbihl RP, Depege N, Huijser P, Merchant S (2005) A regulator of nutritional copper signaling in Chlamydomonas is an SBP domain protein that recognizes the GTAC core of copper response element. Proc. Natl. Acad. Sci. USA 102, 18730-18735.
15. Lannenpaa M, Janonen I, Holtta-Vuori M, Gardemeister M, Porali I, Sopanen T (2004) A new SBP-box gene BpSPL1 in silver birch (Betula pendula). Plant Physiol. 120, 491-500.
16. Lauter N, Kampani A, Carlson S, Goebel M, Moose SP (2005) microRNA172 down-regulates GLOSSY15 to promote vegetative phase change in maize. Proc. Natl. Acad. Sci. USA 102, 9412-9417.
17. Lee J, Park JJ, Kim SL, Yim J, An G (2007) Mutations in the rice LIGULELESS gene result in a complete loss of the auricle, ligule, and laminar joint. Plant Mol. Biol. 65, 487-499.
18. Litt A, Irish VF (2003) Duplication and diversification in the APETALA1/FRUITFULL floral homeotic gene lineage: implications for the evolution of floral development. Genetics 165, 821-833.
19. Manning K, Tor M, Poole M, Hong Y, Thompson AJ, King GJ, Giovannoni JJ, Seymour GB (2006) A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening. Nat. Genet. 38, 948-952.
20. Miura K, Ikeda M, Matsubara A, Song XJ, Ito M, Asano K, Matsuoka M, Kitano H, Ashikari M (2010) OsSPL14 promotes panicle branching and higher grain productivity in rice. Nat. Genet. 42, 545-549.
21. Moreno MA, Harper LC, Krueger RW, Dellaporta SL, Freeling M (1997) LIGULELESS1 encodes a nuclear-localized protein required for induction of ligules and auricles during maize leaf organogenesis. Genes Dev. 11, 616-628.
22. Moxon S, Jing R, Szittya G, Schwach F, Rusholme Pilcher RL, Moulton V, Dalmay T (2008) Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening. Genome Res. 18, 1602-1609.
23. Rhoades MW, Reinhart BJ, Lim LP, Burge CB, Bartel B, Bartel DP (2002) Prediction of plant microRNA targets. Cell 110, 513-520.
24. Rossini L, Vecchietti A, Nicoloso L, Stein N, Franzago S, Salamini F, Pozzi C (2006) Candidate genes for barley mutants involved in plant architecture: an in silico approach. Theor. Appl. Genet. 112, 1073-1085.
25. Shao CX, Takenda Y, Hatano S, Matusuoka M, Hiranol HY (1999) Rice gene encoding the SBP domain protein, which is a new type of transcription factor controlling plant development. Rice Genet. Newsl. 16, 114.
26. Shikata M, Koyama T, Mitsuda N, Ohme-Takagi M (2009) Arabidopsis SBP-box genes SPL10, SPL11 and SPL2 control morphological change in association with shoot maturation in the reproductive phase. Plant Cell Physiol. 50, 2133-2145.
27. Stone J, Liang X, Nekl E, Stiers J (2005) Arabidopsis AtSPL14, a plant-specific SBP-domain transcription factor, participates in plant development and sensitivity to fumonisin B1. Plant J. 41, 744-754.
28. Unte US, Sorensen AM, Pesaresi P, Gandikota M, Leister D, Saedler H, Huijser P (2003) SPL8, an SBP-box gene that affects pollen sac development in Arabidopsis. Plant Cell 15, 1009-1019.
29. Usami T, Horiguchi G, Yano S, Tsukaya H (2009) The more and smaller cells mutants of Arabidopsis thaliana identify novel roles for SQUAMOSA PROMOTER BINDING PROTEIN-LIKE genes in the control of heteroblasty. Development 136, 955-964.
30. Wang H, Nussbaum-Wagler T, Li B, Zhao Q, Vigouroux Y, Faller M, Bomblies K, Lukens L, Doebley JF (2005) The origin of the naked grains of maize. Nature 436, 714-719.
31. Wang JW, Czech B, Weigel D (2009a) miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabidopsis thaliana. Cell 138, 738-749.
32. Wang Y, Hu Z, Yang Y, Chen X, Chen G (2009b) Function annotation of an SBP-box gene in Arabidopsis based on analysis of co-expression networks and promoters. Int. J. Mol. Sci. 10, 116-132.
33. Wu G, Poethig RS (2006) Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3. Development 133, 3539-3547.
34. Xie K, Wu C, Xiong L (2006) Genomic organization, differential expression, and interaction of SQUAMOSA PROMOTER-BINDING-LIKE transcription factors and microRNA156 in rice. Plant Physiol. 142, 280-293.
35. Yamaguchi A, Wu MF, Yang L, Wu G, Poethig RS, Wagner D (2009) The microRNA-regulated SBP-Box transcription factor SPL3 is a direct upstream activator of LEAFY, FRUITFULL, and APETALA1. Dev. Cell 17, 268-278.
36. Yamasaki K, Kigawa T, Inoue M, Tateno M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Nunokawa E, Ishizuka Y, Terada T, Shirouzu M, Osanai T, Tanaka A, Seki M, Shinozaki K, Yokoyama S (2004) A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors. J. Mol. Biol. 337, 49-63.
37. Yamasaki H, Hayashi M, Fukazawa M, Kobayashi Y, Shikanai T (2009) SQUAMOSA PROMOTER BINDING PROTEIN-LIKE7 Is a central regulator for copper homeostasis in Arabidopsis. Plant Cell 21, 347-361.
38. Zhang Y, Schwarz S, Saedler H, Huijser P (2007) SPL8, a local regulator in a subset of gibberellin-mediated developmental processes in Arabidopsis. Plant Mol. Biol. 63, 429-439.
39. Zwick MS, Islam-Faridi MN, Czeschin DG Jr, Wing RA, Hart GE, Stelly DM, Price HJ (1998) Physical mapping of the liguleless linkage group in Sorghum bicolor using rice RFLP-selected sorghum BACs. Genetics 148, 1983-1992.