Two-dimensional optical spectroscopy of molecular aggregates

Lithuanian Journal of Physics

Volumn 50, Issue 3, 2010, Pages 267-303

  Butkus, V ^a   Abramavicius, D ^a,b   Gelzinis, A ^a   Valkunas, L ^a,c  

^a VILNIUS UNIVERSITY   (Lithuania)

^b JILIN UNIVERSITY   (China)

^c CENTER FOR PHYSICAL SCIENCES AND TECHNOLOGY   (Lithuania)

Author keywords

Four wave mixing; Molecular excitons; Optical two dimensional spectroscopy

Indexed keywords

EID: 77958542470     PISSN: 16488504     EISSN: None     Source Type: Journal    
DOI: 10.3952/lithjphys.50305     Document Type: Review

References (50)

1. D.P. Weitekamp, K.Duppen and D.A. Wiersma, Delayed four-wave-mixing spectroscopy in molecular crystals: A nonperturbative approach, Phys. Rev. A 27, 3089-3111 (1983).
2. M. Cho, N.F. Scherer, G.R. Fleming, and S. Mukamel, Photon echoes and related four-wave-mixing spectroscopies using phase-locked pulses, J. Chem. Phys. 96, 5618-5629 (1992).
3. M. Cho, H.M. Vaswani, T. Brixner, J. Stenger, and G.R. Fleming, Exciton analysis in 2d electronic spectroscopy, J. Phys. Chem. B 109, 10542-10556 (2005).
4. D. Zigmantas, E.L. Read, T. Mančal, T. Brixner, A.T. Gardiner, R.J. Cogdell, and G.R. Fleming, Two-dimensional electronic spectroscopy ofthe B800-B820 light-harvesting complex, Proc. Natl. Acad. Sci. USA 103, 12672-12677 (2006).
5. VI. Prokhorenko, A. Halpin, and R.J.D. Miller, Coherently-controlled two-dimensional photon echo electronic spectroscopy, Opt. Express 17, 9764-9779 (2009).
6. B.S. Prall, D.Y. Parkinson, G.R. Fleming, M. Yang, and N. Ishikawa, Two-dimensional optical spectroscopy: Two-color photon echoes of electronically coupled phthalocyanine dimers, J. Chem. Phys. 120, 2537-2540 (2004).
7. M. Cho and G.R. Fleming, The integrated photon echo and solvation dynamics. II. Peak shifts and two-dimensional photon echo of a coupled chromophore system, J. Chem. Phys. 123, 114506 (2005).
8. P. Kjellberg, B. Brüggemann, and T. Pullerits, Two-dimensional electronic spectroscopy of an excitonically coupled dimer, Phys. Rev. B 74, 024303 (2006).
9. D.V. Voronine, D. Abramavicius, and S. Mukamel, Coherent control of cross-peaks in chirality-induced two-dimensional optical signals ofexcitons, J. Chem. Phys. 125, 224504 (2006).
10. A.V. Pisliakov, T. Mančal, and G.R. Fleming, Two-dimensional optical three-pulse photon echo spectroscopy. II. signatures of coherent electronic motion and exciton population transfer in dimer two-dimensional spectra, J. Chem. Phys. 124, 234505 (2006).
11. Y.-C. Cheng and G.R. Fleming, Coherence quantum beats in two-dimensional electronic spectroscopy, J. Phys. Chem. A 112, 4254-4260 (2008).
12. D. Abramavicius, V. Butkus, J. Bujokas, and L. Valkunas, Manipulation of two-dimensional spectra of excitonically coupled molecules by narrow-bandwidth laser pulses, Chem. Phys. 372, 22-32 (2010).
13. T. Brixner, J. Stenger, H.M. Vaswani, M. Cho, R.E. Blankenship, and G.R. Fleming, Two-dimensional spectroscopy of electronic couplings in photosynthesis, Nature 434, 625-628 (2005).
14. G.S. Engel, T.R. Calhoun, E.L. Read, T.K. Ahn, T. Mancal, Y.C. Cheng, R.E. Blankenship, and G.R. Fleming, Evidence for wavelike energy transfer through quantum coherence in photosynthetic systems, Nature 446, 782 (2007).
15. VI. Prokhorenko, A.R. Holzwarth, F.R. Nowak, and T.J. Aartsma, Growing-in of optical coherence in the FMO antenna complexes, J. Phys. Chem. B 106, 9923-9933 (2002).
16. E. Collini and G.D. Scholes, Coherent intrachain energy migration in a conjugated polymer at room temperature, Science 323, 369-373 (2009).
17. J.M. Womick, S.A. Miller, and A.M. Moran, Probing the dynamics of intraband electronic coherences in cylindrical molecular aggregates, J. Phys. Chem. A 113, 6587-6598 (2009).
18. F. Milota, J. Sperling, A. Nemeth, andH.F. Kauffmann, Two-dimensional electronic photon echoes ofa double band J-aggregate: Quantum oscillatory motion versus exciton relaxation, Chem. Phys. 357, 45-53 (2009).
19. I. Stiopkin, T. Brixner, M. Yang, and G.R. Fleming, Heterogeneous exciton dynamics revealed by two-dimensional optical spectroscopy, J. Phys. Chem. B 110, 20032-20037 (2006).
20. P.F. Tian, D. Keusters, Y. Suzaki, and W.S. Warren, Femtosecond phase-coherent two-dimensional spectroscopy, Science 300, 1553-1555 (2003).
21. T. Brixner, T. Mančai, I.V. Stiopkin, and G.R. Fleming, Phase-stabilized two-dimensional electronic spectroscopy, J. Chem. Phys. 121, 4221-4236 (2004).
22. S. Mukamel, Multidimensional gemtosecond correlation spectroscopies of electronic and vibrational excitations, Annu. Rev. Phys. Chem. 51, 691-729 (2000).
23. D.M. Jonas, Two-dimensional femtosecond spectroscopy, Annu. Rev. Phys. Chem. 54, 425-463 (2003).
24. M. Cho, Coherent two-dimensional optical spectroscopy, Chem. Rev. 108, 1331-1418 (2008).
25. B. Brüggemann, P. Kjellberg, and T. Pullerits, Non-perturbative calculation of 2d spectra in heterogeneous systems: Exciton relaxation in the fmo complex, Chem. Phys. Lett. 444, 192-196 (2007).
26. D. Abramavicius, D.V. Voronine, and S. Mukamel, Unraveling coherent dynamics and energy dissipation in photosynthetic complexes by 2D spectroscopy, Biophys. J. 94, 3613-3619 (2008).
27. D. Abramavicius, B. Palmieri, D.V. Voronine, F. Šanda, and S. Mukamel, Coherent multidimensional optical spectroscopy of excitons in molecular aggregates; Quasiparticle versus supermolecule perspectives, Chem. Rev. 109, 2350-2408 (2009).
28. T. Brixner, I.V. Stiopkin, and G.R. Fleming, Tunable two-dimensional femtosecond spectroscopy, Opt. Lett. 29, 884-886 (2004).
29. S. Mukamel, Principles of Nonlinear Optical Spectroscopy (Oxford University Press, New York (1995).
30. D. Kohen, C.C. Marston, and D.J. Tannor, Phase space approach to theories of quantum dissipation, J. Chem. Phys. 107, 5236-5253 (1997).
31. M. Khalil, N. Demirdöven, and A. Tokmakoff, Coherent 2D IR spectroscopy: Molecular structure and dynamics in solution, J. Phys. Chem. A 107, 5258-5279 (2003).
32. D. Abramavicius, L. Valkunas, and S. Mukamel, Transport and correlated fluctuations in the nonlinear optical response of excitons, Europhys. Lett. 80, 17005 (2007).
33. M. Yang and G.R. Fleming, Influence of phonons on exciton transfer dynamics: comparison of the Redfield, Förster, and modified Redfield equations, Chem. Phys. 282, 163-180 (2002).
34. H. van Amerongen, L. Valkunas, and R. van Grondelle, Photosynthetic Excitons (World Scientific, Singapore, 2000).
35. A. Davydov, A Theory of Molecular Excitions (McGraw-Hill, New York, 1962).
36. R.E. Blankenship, Molecular Mechanisms of Photosynthesis (Wiley-Blackwell, 2002).
37. E.E. Jelley, Spectral absorption and fluorescence of dyes in the molecular state, Nature 138, 1009 (1936).
38. G. Scheibe, Über die Veränderlichkeit der Absorptionsspektren in Lösungen und die Nebenvalenzen als ihre Ursache, Angew. Chem. 49, 563 (1936).
39. T. Kobayashi, J-aggregates (World Scientific, Singapore, 1996).
40. E.W. Knapp, Lineshapes of molecular aggregates. exchange narrowing and intersite correlation, Chem. Phys. 85, 73-82 (1984).
41. VA. Malyshev and F. Domínguez-Adame, Motional narrowing effect in one-dimensional Frenkel chains with configurational disorder, Chem. Phys. Lett. 313, 255-260 (1999).
42. H. Fidder, J. Knoester, and D.A. Wiersma, Optical properties of disordered molecular aggregates: A numerical study, J. Chem. Phys. 95, 7880-7890 (1991).
43. H. Fidder, Absorption and emission studies on pure and mixed J-aggregates of pseudoisocyanine, Chem. Phys. 341, 158-168 (2007).
44. R.E. Fenna and B.W. Matthews, Chlorophyll arrangement in a bacteriochlorophyll protein from Chlorobium limicola, Nature 258, 573-577 (1975).
45. E.L. Read, G.S. Schlau-Cohen, G.S. Engel, J. Wen, R.E. Blankenship, and G.R. Fleming, Visualization of excitonic structure in the Fenna-Matthews-Olson photosynthetic complex by polarization-dependent two-dimensional electronic spectroscopy, Biophys. J. 95, 847-856 (2008).
46. J. Olsina and T. Mančal, Electronic coherence dephasing in excitonic molecular complexes: Role of Markov and secular approximations, J. Mol. Mod. (2010) [submitted].
47. A. Ishizaki and G.R. Fleming, Theoretical examination of quantum coherence in a photosynthetic system at physiological temperature, Proc. Natl. Acad. Sci. USA 106, 17255-17260 (2009).
48. A. Ishizaki and G.R. Fleming, Unified treatment of quantum coherent and incoherent hopping dynamics in electronic energy transfer: Reduced hierarchy equation approach, J. Chem. Phys. 130, 234111 (2009).
49. A. Camara-Artigas, R.E. Blankenship, and J.P. Allen, The structure of the FMO protein from Chlorobium tepidum at 2.2 Å resolution, Photosynth. Res. 75, 49 (2003).
50. D. Abramavicius, B. Palmieri, and S. Mukamel, Extracting single and two-exciton couplings in photosynthetic complexes by coherent two-dimensional electronic spectra, Chem. Phys. 357, 79-84 (2008).