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Volumn 46, Issue 3, 2010, Pages 243-249

A proof-of-principle demonstration of a novel microarray-based method for quantifying DNA methylation levels

Author keywords

CD11a; CD70; DNA methylation; Microarray microchip; Systemic lupus erythematosus; T lymphocytes

Indexed keywords

CD11A; CD70; DNA METHYLATION; SYSTEMIC LUPUS ERYTHEMATOSUS; T-LYMPHOCYTES;

EID: 77958097870     PISSN: 10736085     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12033-010-9297-y     Document Type: Article
Times cited : (9)

References (30)
  • 1
    • 44849104309 scopus 로고    scopus 로고
    • + T cells from patients with systemic lupus erythematosus
    • DOI 10.1111/j.1365-2567.2007.02771.x
    • E Balada J Ordi-Ros S Serrano-Acedo, et al. 2008 Transcript levels of DNA methyltransferases DNMT1, DNMT3A and DNMT3B in CD4 + T cells from patients with systemic lupus erythematosus Immunology 124 339 347 1:CAS:528: DC%2BD1cXotVehtrg%3D 10.1111/j.1365-2567.2007.02771.x (Pubitemid 351793466)
    • (2008) Immunology , vol.124 , Issue.3 , pp. 339-347
    • Balada, E.1    Ordi-Ros, J.2    Serrano-Acedo, S.3    Martinez-Lostao, L.4    Rosa-Leyva, M.5    Vilardell-Tarres, M.6
  • 2
    • 33845332711 scopus 로고    scopus 로고
    • DNA hypomethylation and human diseases
    • 1:CAS:528:DC%2BD28Xhtlaltr7K
    • AS Wilson BE Power PL Molloy 2007 DNA hypomethylation and human diseases Biochimica et Biophysica Acta 1775 138 162 1:CAS:528:DC%2BD28Xhtlaltr7K
    • (2007) Biochimica et Biophysica Acta , vol.1775 , pp. 138-162
    • Wilson, A.S.1    Power, B.E.2    Molloy, P.L.3
  • 3
    • 68049087508 scopus 로고    scopus 로고
    • Methods for detection of methylated cytosine residues in DNA
    • 1:STN:280:DC%2BD1Mrht1Cktg%3D%3D
    • SA Smirnikhina AV Lavrov 2009 Methods for detection of methylated cytosine residues in DNA Molekuliarnaia Biologiia (Moskva) 43 387 391 1:STN:280:DC%2BD1Mrht1Cktg%3D%3D
    • (2009) Molekuliarnaia Biologiia (Moskva) , vol.43 , pp. 387-391
    • Smirnikhina, S.A.1    Lavrov, A.V.2
  • 4
    • 58149215075 scopus 로고    scopus 로고
    • Epigenetic regulation and the pathogenesis of systemic lupus erythematosus
    • 1:CAS:528:DC%2BD1cXhsFagsLjO 10.1016/j.trsl.2008.10.007
    • Y Pan AH Sawalha 2009 Epigenetic regulation and the pathogenesis of systemic lupus erythematosus Translational Research 153 4 10 1:CAS:528:DC%2BD1cXhsFagsLjO 10.1016/j.trsl.2008.10.007
    • (2009) Translational Research , vol.153 , pp. 4-10
    • Pan, Y.1    Sawalha, A.H.2
  • 5
    • 33845443302 scopus 로고    scopus 로고
    • Epigenetic diagnostics of cancer-the application of DNA methylation markers
    • J Paluszczak W Baer-Dubowska 2006 Epigenetic diagnostics of cancer-the application of DNA methylation markers Journal of Applied Genetics 47 365 375
    • (2006) Journal of Applied Genetics , vol.47 , pp. 365-375
    • Paluszczak, J.1    Baer-Dubowska, W.2
  • 6
    • 73549085850 scopus 로고    scopus 로고
    • DNA methylation: An introduction to the biology and the disease-associated changes of a promising biomarker
    • 1:CAS:528:DC%2BD1MXhsFOhtLrO 10.1007/s12033-009-9216-2
    • J Tost 2010 DNA methylation: An introduction to the biology and the disease-associated changes of a promising biomarker Molecular Biotechnology 44 71 81 1:CAS:528:DC%2BD1MXhsFOhtLrO 10.1007/s12033-009-9216-2
    • (2010) Molecular Biotechnology , vol.44 , pp. 71-81
    • Tost, J.1
  • 7
    • 0022540321 scopus 로고
    • CpG-rich islands and the function of DNA methylation
    • 1:CAS:528:DyaL28XktlKns78%3D 10.1038/321209a0
    • AP Bird 1986 CpG-rich islands and the function of DNA methylation Nature 321 209 213 1:CAS:528:DyaL28XktlKns78%3D 10.1038/321209a0
    • (1986) Nature , vol.321 , pp. 209-213
    • Bird, A.P.1
  • 8
    • 1042278765 scopus 로고    scopus 로고
    • The history of cancer epigenetics
    • 1:CAS:528:DC%2BD2cXks1CktA%3D%3D 10.1038/nrc1279
    • AP Feinberg B Tycko 2004 The history of cancer epigenetics Nature Reviews Cancer 4 143 153 1:CAS:528:DC%2BD2cXks1CktA%3D%3D 10.1038/nrc1279
    • (2004) Nature Reviews Cancer , vol.4 , pp. 143-153
    • Feinberg, A.P.1    Tycko, B.2
  • 9
    • 16844384464 scopus 로고    scopus 로고
    • Discovery of aberrant expression of R-RAS by cancer-linked DNA hypomethylation in gastric cancer using microarrays
    • DOI 10.1158/0008-5472.CAN-04-3340
    • M Nishigaki K Aoyagi I Danjoh, et al. 2005 Discovery of aberrant expression of R-RAS by cancer-linked DNA hypomethylation in gastric cancer using microarrays Cancer Research 65 2115 2124 1:CAS:528:DC%2BD2MXisFGgurw%3D 10.1158/0008-5472.CAN-04-3340 (Pubitemid 40490117)
    • (2005) Cancer Research , vol.65 , Issue.6 , pp. 2115-2124
    • Nishigaki, M.1    Aoyagi, K.2    Danjoh, I.3    Fukaya, M.4    Yanagihara, K.5    Sakamoto, H.6    Yoshida, T.7    Sasaki, H.8
  • 10
    • 0142247168 scopus 로고    scopus 로고
    • DNA methylation and autoimmune disease
    • DOI 10.1016/S1521-6616(03)00206-7
    • B Richardson 2003 DNA methylation and autoimmune disease Clinical Immunology 109 72 79 1:CAS:528:DC%2BD3sXosFSmsLg%3D 10.1016/S1521-6616(03)00206- 7 (Pubitemid 37324744)
    • (2003) Clinical Immunology , vol.109 , Issue.1 , pp. 72-79
    • Richardson, B.1
  • 11
    • 70349561258 scopus 로고    scopus 로고
    • The socioeconomic burden of SLE
    • 10.1038/nrrheum.2009.106
    • CS Lau A Mak 2009 The socioeconomic burden of SLE Nature Reviews Rheumatology 5 400 404 10.1038/nrrheum.2009.106
    • (2009) Nature Reviews Rheumatology , vol.5 , pp. 400-404
    • Lau, C.S.1    Mak, A.2
  • 12
    • 4344624041 scopus 로고    scopus 로고
    • B cells in human and murine systemic lupus erythematosus
    • DOI 10.1097/01.bor.0000133660.52599.f6
    • J Anolik I Sanz 2004 B cells in human and murine systemic lupus erythematosus Current Opinion in Rheumatology 16 505 512 10.1097/01.bor. 0000133660.52599.f6 (Pubitemid 39128317)
    • (2004) Current Opinion in Rheumatology , vol.16 , Issue.5 , pp. 505-512
    • Anolik, J.1    Sanz, I.2
  • 13
    • 18644376210 scopus 로고    scopus 로고
    • Demethylation of the same promoter sequence increases CD70 expression in lupus T cells and T cells treated with lupus-inducing drugs
    • 1:CAS:528:DC%2BD2MXjvV2mtLo%3D
    • Q Lu A Wu BC Richardson 2005 Demethylation of the same promoter sequence increases CD70 expression in lupus T cells and T cells treated with lupus-inducing drugs Journal of Immunology 174 6212 6219 1:CAS:528: DC%2BD2MXjvV2mtLo%3D
    • (2005) Journal of Immunology , vol.174 , pp. 6212-6219
    • Lu, Q.1    Wu, A.2    Richardson, B.C.3
  • 14
    • 0036095885 scopus 로고    scopus 로고
    • Demethylation of ITGAL (CD11a) regulatory sequences in systemic lupus erythematosus
    • DOI 10.1002/art.10234
    • Q Lu M Kaplan D Ray, et al. 2002 Demethylation of ITGAL (CD11a) regulatory sequences in systemic lupus erythematosus Arthritis and Rheumatism 46 1282 1291 1:CAS:528:DC%2BD38XksVynsrs%3D 10.1002/art.10234 (Pubitemid 34525836)
    • (2002) Arthritis and Rheumatism , vol.46 , Issue.5 , pp. 1282-1291
    • Lu, Q.1    Kaplan, M.2    Ray, D.3    Ray, D.4    Zacharek, S.5    Gutsch, D.6    Richardson, B.7
  • 15
    • 2642556447 scopus 로고    scopus 로고
    • Overexpression of CD70 and overstimulation of IgG synthesis by lupus T cells and T cells treated with DNA methylation inhibitors
    • DOI 10.1002/art.20255
    • K Oelke Q Lu D Richardson, et al. 2004 Overexpression of CD70 and overstimulation of IgG synthesis by lupus T cells and T cells treated with DNA methylation inhibitors Arthritis and Rheumatism 50 1850 1860 1:CAS:528:DC%2BD2cXlsFaqtLc%3D 10.1002/art.20255 (Pubitemid 38725098)
    • (2004) Arthritis and Rheumatism , vol.50 , Issue.6 , pp. 1850-1860
    • Oelke, K.1    Lu, Q.2    Richardson, D.3    Wu, A.4    Deng, C.5    Hanash, S.6    Richardson, B.7
  • 16
    • 0037097819 scopus 로고    scopus 로고
    • Effect of DNA methylation and chromatin structure on ITGAL expression
    • DOI 10.1182/blood.V99.12.4503
    • Q Lu D Ray D Gutsch, et al. 2002 Effect of DNA methylation and chromatin structure on ITGAL expression Blood 99 4503 4508 1:CAS:528:DC%2BD38XksFGks7k%3D 10.1182/blood.V99.12.4503 (Pubitemid 34627220)
    • (2002) Blood , vol.99 , Issue.12 , pp. 4503-4508
    • Lu, Q.1    Ray, D.2    Gutsch, D.3    Richardson, B.4
  • 17
    • 0036274359 scopus 로고    scopus 로고
    • The fundamental role of epigenetic events in cancer
    • 1:CAS:528:DC%2BD38XksFOmsrw%3D 10.1038/nrg962
    • PA Jones SB Baylin 2002 The fundamental role of epigenetic events in cancer Nature Reviews Genetics 3 415 428 1:CAS:528:DC%2BD38XksFOmsrw%3D 10.1038/nrg962
    • (2002) Nature Reviews Genetics , vol.3 , pp. 415-428
    • Jones, P.A.1    Baylin, S.B.2
  • 18
    • 29244469466 scopus 로고    scopus 로고
    • The epigenetic progenitor origin of human cancer
    • DOI 10.1038/nrg1748
    • AP Feinberg R Ohlsson S Henikoff 2006 The epigenetic progenitor origin of human cancer Nature Reviews Genetics 7 21 33 1:CAS:528:DC%2BD2MXhtlanu73E 10.1038/nrg1748 (Pubitemid 41828945)
    • (2006) Nature Reviews Genetics , vol.7 , Issue.1 , pp. 21-33
    • Feinberg, A.P.1    Ohlsson, R.2    Henikoff, S.3
  • 19
    • 0031229830 scopus 로고    scopus 로고
    • Updating the American College of Rheumatology revised criteria for the classification of systemic lupus erythematosus
    • 1:STN:280:DyaK2svmsVaisw%3D%3D 10.1002/art.1780400928
    • MC Hochberg 1997 Updating the American College of Rheumatology revised criteria for the classification of systemic lupus erythematosus Arthritis and Rheumatism 40 1725 1:STN:280:DyaK2svmsVaisw%3D%3D 10.1002/art.1780400928
    • (1997) Arthritis and Rheumatism , vol.40 , pp. 1725
    • Hochberg, M.C.1
  • 20
    • 0026777352 scopus 로고
    • Derivation of the SLEDAI. A disease activity index for lupus patients. The Committee on Prognosis Studies in SLE
    • 1:STN:280:DyaK383oslWrtg%3D%3D 10.1002/art.1780350606
    • C Bombardier DD Gladman MB Urowitz, et al. 1992 Derivation of the SLEDAI. A disease activity index for lupus patients. The Committee on Prognosis Studies in SLE Arthritis and Rheumatism 35 630 640 1:STN:280:DyaK383oslWrtg%3D%3D 10.1002/art.1780350606
    • (1992) Arthritis and Rheumatism , vol.35 , pp. 630-640
    • Bombardier, C.1    Gladman, D.D.2    Urowitz, M.B.3
  • 21
    • 18644366081 scopus 로고    scopus 로고
    • Methods for analyzing the role of DNA methylation and chromatin structure in regulating T lymphocyte gene expression
    • DOI 10.1251/bpo89
    • Q Lu B Richardson 2004 Methods for analyzing the role of DNA methylation and chromatin structure in regulating T lymphocyte gene expression Biological Procedures Online 6 189 203 1:CAS:528:DC%2BD2cXptlShs7s%3D 10.1251/bpo89 (Pubitemid 41358147)
    • (2004) Biological Procedures Online , vol.6 , Issue.1 , pp. 189-203
    • Lu, Q.1    Richardson, B.2
  • 22
    • 56849133040 scopus 로고    scopus 로고
    • DNA methylation-based biomarkers for early detection of non-small cell lung cancer: An update
    • 10.1186/1476-4598-7-81
    • PP Anglim TA Alonzo IA Laird-Offringa 2008 DNA methylation-based biomarkers for early detection of non-small cell lung cancer: an update Molecular Cancer 7 81 10.1186/1476-4598-7-81
    • (2008) Molecular Cancer , vol.7 , pp. 81
    • Anglim, P.P.1    Alonzo, T.A.2    Laird-Offringa, I.A.3
  • 23
    • 0037354547 scopus 로고    scopus 로고
    • DNA methylation, a biomarker for colorectal cancer: Implications for screening and pathological utility
    • 1:CAS:528:DC%2BD3sXjt1yrsbw%3D 10.1111/j.1749-6632.2003.tb05980.x
    • AM Jubb P Quirke AJ Oates 2003 DNA methylation, a biomarker for colorectal cancer: Implications for screening and pathological utility Annals of the New York Academy of Sciences 983 251 267 1:CAS:528:DC%2BD3sXjt1yrsbw%3D 10.1111/j.1749-6632.2003.tb05980.x
    • (2003) Annals of the New York Academy of Sciences , vol.983 , pp. 251-267
    • Jubb, A.M.1    Quirke, P.2    Oates, A.J.3
  • 24
    • 77953825565 scopus 로고    scopus 로고
    • DNA methylation as a biomarker for cardiovascular disease risk
    • M Kim TI Long K Arakawa, et al. 2010 DNA methylation as a biomarker for cardiovascular disease risk Public Library of Science ONE 5 e9692.21
    • (2010) Public Library of Science ONE , vol.5 , pp. 969221
    • Kim, M.1    Long, T.I.2    Arakawa, K.3
  • 25
    • 38349173162 scopus 로고    scopus 로고
    • Identification of a panel of sensitive and specific DNA methylation markers for lung adenocarcinoma
    • 10.1186/1476-4598-6-70
    • JA Tsou JS Galler KD Siegmund, et al. 2007 Identification of a panel of sensitive and specific DNA methylation markers for lung adenocarcinoma Molecular Cancer 6 70 10.1186/1476-4598-6-70
    • (2007) Molecular Cancer , vol.6 , pp. 70
    • Tsou, J.A.1    Galler, J.S.2    Siegmund, K.D.3
  • 26
    • 48649086619 scopus 로고    scopus 로고
    • Identification of a panel of sensitive and specific DNA methylation markers for squamous cell lung cancer
    • 10.1186/1476-4598-7-62
    • PP Anglim JS Galler MN Koss, et al. 2008 Identification of a panel of sensitive and specific DNA methylation markers for squamous cell lung cancer Molecular Cancer 7 62 10.1186/1476-4598-7-62
    • (2008) Molecular Cancer , vol.7 , pp. 62
    • Anglim, P.P.1    Galler, J.S.2    Koss, M.N.3
  • 27
    • 35648953334 scopus 로고    scopus 로고
    • Characterization of a multiple epigenetic marker panel for lung cancer detection and risk assessment in plasma
    • 10.1002/cncr.23001
    • HS Hsu TP Chen CH Hung, et al. 2002 Characterization of a multiple epigenetic marker panel for lung cancer detection and risk assessment in plasma Cancer 110 2019 2026 10.1002/cncr.23001
    • (2002) Cancer , vol.110 , pp. 2019-2026
    • Hsu, H.S.1    Chen, T.P.2    Hung, C.H.3
  • 29
    • 0037068375 scopus 로고    scopus 로고
    • The study of aberrant methylation in cancer via restriction landmark genomic scanning
    • DOI 10.1038/sj.onc.1205608
    • DJ Smiraglia C Plass 2002 The study of aberrant methylation in cancer via restriction landmark genomic scanning Oncogene 21 5414 5426 1:CAS:528:DC%2BD38XlslSqt7Y%3D 10.1038/sj.onc.1205608 (Pubitemid 34983478)
    • (2002) Oncogene , vol.21 , Issue.35 , pp. 5414-5426
    • Smiraglia, D.J.1    Plass, C.2
  • 30
    • 0036144883 scopus 로고    scopus 로고
    • Methylation-specific oligonucleotide microarray: A new potential for high-throughput methylation analysis
    • DOI 10.1101/gr.202801
    • RS Gitan H Shi CM Chen, et al. 2002 Methylation-specific oligonucleotide microarray: A new potential for high-throughput methylation analysis Genome Research 12 158 164 1:CAS:528:DC%2BD38XksV2qtQ%3D%3D 10.1101/gr.202801 (Pubitemid 34065599)
    • (2002) Genome Research , vol.12 , Issue.1 , pp. 158-164
    • Gitan, R.S.1    Shi, H.2    Chen, C.-M.3    Yan, P.S.4    Huang, T.H.-M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.