메뉴 건너뛰기




Volumn 60, Issue 3, 2010, Pages 505-515

Transcriptional Response of Rhodococcus aetherivorans I24 to Polychlorinated Biphenyl-Contaminated Sediments

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL RNA; POLYCHLORINATED BIPHENYL;

EID: 77958048005     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-010-9650-5     Document Type: Article
Times cited : (13)

References (36)
  • 1
    • 33846298496 scopus 로고    scopus 로고
    • Response to (chloro)biphenyls of the polychlorobiphenyl-degrader Burkholderia xenovorans LB400 involves stress proteins also induced by heat shock and oxidative stress
    • Agulló L, Cámara B, Martínez P, Latorre V, Seeger M (2007) Response to (chloro)biphenyls of the polychlorobiphenyl-degrader Burkholderia xenovorans LB400 involves stress proteins also induced by heat shock and oxidative stress. FEMS Microbiol Lett 267: 167-175.
    • (2007) FEMS Microbiol Lett , vol.267 , pp. 167-175
    • Agulló, L.1    Cámara, B.2    Martínez, P.3    Latorre, V.4    Seeger, M.5
  • 2
    • 0028276797 scopus 로고
    • Analysis of three 2, 3-dihydroxybiphenyl 1, 2-dioxygenases found in Rhodococcus globerulus P6. Identification of a new family of extradiol dioxygenases
    • Asturias J, Eltis L, Prucha M, Timmis K (1994) Analysis of three 2, 3-dihydroxybiphenyl 1, 2-dioxygenases found in Rhodococcus globerulus P6. Identification of a new family of extradiol dioxygenases. J Biol Chem 269: 7807-7815.
    • (1994) J Biol Chem , vol.269 , pp. 7807-7815
    • Asturias, J.1    Eltis, L.2    Prucha, M.3    Timmis, K.4
  • 4
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad B, Irizarry R, Astrand M, Speed T (2003) A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19: 185-193.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.1    Irizarry, R.2    Astrand, M.3    Speed, T.4
  • 5
    • 0022527656 scopus 로고
    • Degradation of highly chlorinated PCBs by Pseudomonas strain LB400
    • Bopp L (1986) Degradation of highly chlorinated PCBs by Pseudomonas strain LB400. J Ind Microbiol Biotec 1: 23-29.
    • (1986) J Ind Microbiol Biotec , vol.1 , pp. 23-29
    • Bopp, L.1
  • 6
    • 12844268769 scopus 로고    scopus 로고
    • Potential application of gene expression fingerprinting for food safety screening
    • Buterin T, Koch C, Naegeli H (2005) Potential application of gene expression fingerprinting for food safety screening. Anal Chim Acta 529: 33-39.
    • (2005) Anal Chim Acta , vol.529 , pp. 33-39
    • Buterin, T.1    Koch, C.2    Naegeli, H.3
  • 8
    • 2442678163 scopus 로고    scopus 로고
    • Growth of polychlorinated-biphenyl-degrading bacteria in the presence of biphenyl and chlorobiphenyls generates oxidative stress and massive accumulation of inorganic polyphosphate
    • Chávez F, Lünsdorf H, Jerez C (2004) Growth of polychlorinated-biphenyl-degrading bacteria in the presence of biphenyl and chlorobiphenyls generates oxidative stress and massive accumulation of inorganic polyphosphate. Appl Environ Microbiol 70: 3064-3072.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 3064-3072
    • Chávez, F.1    Lünsdorf, H.2    Jerez, C.3
  • 10
    • 28044450599 scopus 로고    scopus 로고
    • Growth substrate-and phase-specific expression of biphenyl, benzoate, and C1 metabolic pathways in Burkholderia xenovorans LB400
    • Denef V, Patrauchan M, Florizone C, Park J, Tsoi T, Verstraete W, Tiedje J, Eltis L (2005) Growth substrate-and phase-specific expression of biphenyl, benzoate, and C1 metabolic pathways in Burkholderia xenovorans LB400. J Bacteriol 187: 7996-8005.
    • (2005) J Bacteriol , vol.187 , pp. 7996-8005
    • Denef, V.1    Patrauchan, M.2    Florizone, C.3    Park, J.4    Tsoi, T.5    Verstraete, W.6    Tiedje, J.7    Eltis, L.8
  • 11
    • 77958077103 scopus 로고    scopus 로고
    • Duintjer J, Eisma M (2000) Milieu-aspecten onderhoudsbaggerspecie. Resultaten monstercampagne 2000. Gemeentelijk Havenbedrijf Rotterdam/ RWS Directie Zuid-Holland: 13.
  • 12
    • 33748771178 scopus 로고    scopus 로고
    • Transcriptomic assessment of isozymes in the biphenyl pathway of Rhodococcus sp. strain RHA1
    • Gonçalves E, Hara H, Miyazawa D, Davies J, Eltis L, Mohn W (2006) Transcriptomic assessment of isozymes in the biphenyl pathway of Rhodococcus sp. strain RHA1. Appl Environ Microbiol 72: 6183-6193.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 6183-6193
    • Gonçalves, E.1    Hara, H.2    Miyazawa, D.3    Davies, J.4    Eltis, L.5    Mohn, W.6
  • 13
    • 0032924503 scopus 로고    scopus 로고
    • Construction and characterization of two recombinant bacteria that grow on ortho-and para-substituted chlorobiphenyls
    • Hrywna Y, Tsoi T, Maltseva O, Jr Q, Tiedje J (1999) Construction and characterization of two recombinant bacteria that grow on ortho-and para-substituted chlorobiphenyls. Appl Environ Microbiol 65: 2163-2169.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 2163-2169
    • Hrywna, Y.1    Tsoi, T.2    Maltseva, O.3    Jr, Q.4    Tiedje, J.5
  • 14
    • 0033037716 scopus 로고    scopus 로고
    • SodA and manganese are essential for resistance to oxidative stress in growing and sporulating cells of Bacillus subtilis
    • Inaoka T, Matsumura Y, Tsuchido T (1999) SodA and manganese are essential for resistance to oxidative stress in growing and sporulating cells of Bacillus subtilis. J Bacteriol 181: 1939-1943.
    • (1999) J Bacteriol , vol.181 , pp. 1939-1943
    • Inaoka, T.1    Matsumura, Y.2    Tsuchido, T.3
  • 17
    • 0031736057 scopus 로고    scopus 로고
    • Construction of a bioluminescent reporter strain to detect polychlorinated biphenyls
    • Layton AC, Muccini M, Ghosh MM, Sayler GS (1998) Construction of a bioluminescent reporter strain to detect polychlorinated biphenyls. Appl Environ Microbiol 64: 5023-5026.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 5023-5026
    • Layton, A.C.1    Muccini, M.2    Ghosh, M.M.3    Sayler, G.S.4
  • 18
    • 37849019255 scopus 로고    scopus 로고
    • Development of a Gfp-based biosensor for detecting the bioavailability and biodegradation of polychlorinated biphenyls (PCBs)
    • Liu XM, Germaine KJ, Ryan D, Dowling DN (2007) Development of a Gfp-based biosensor for detecting the bioavailability and biodegradation of polychlorinated biphenyls (PCBs). J Environ Eng Landsc 15: 261-268.
    • (2007) J Environ Eng Landsc , vol.15 , pp. 261-268
    • Liu, X.M.1    Germaine, K.J.2    Ryan, D.3    Dowling, D.N.4
  • 19
    • 0036038218 scopus 로고    scopus 로고
    • Engineering an indene bioconversion process for the production of cis-aminoindanol: a model system for the production of chiral synthons
    • O'Brien XM, Parker JA, Lessard PA, Sinskey AJ (2002) Engineering an indene bioconversion process for the production of cis-aminoindanol: a model system for the production of chiral synthons. Appl Microbiol Biot 59: 389-399.
    • (2002) Appl Microbiol Biot , vol.59 , pp. 389-399
    • O'Brien, X.M.1    Parker, J.A.2    Lessard, P.A.3    Sinskey, A.J.4
  • 20
    • 4544328165 scopus 로고    scopus 로고
    • Strategies for bioremediation of polychlorinated biphenyls
    • Ohtsubo Y, Kudo T, Tsuda M, Nagata Y (2004) Strategies for bioremediation of polychlorinated biphenyls. Appl Microbiol Biot 65: 250-258.
    • (2004) Appl Microbiol Biot , vol.65 , pp. 250-258
    • Ohtsubo, Y.1    Kudo, T.2    Tsuda, M.3    Nagata, Y.4
  • 21
    • 33750058274 scopus 로고    scopus 로고
    • Coping with polychlorinated biphenyl (PCB) toxicity: Physiological and genome-wide responses of Burkholderia xenovorans LB400 to PCB-mediated stress
    • Parnell J, Park J, Denef V, Tsoi T, Hashsham S, Quensen JR, Tiedje J (2006) Coping with polychlorinated biphenyl (PCB) toxicity: Physiological and genome-wide responses of Burkholderia xenovorans LB400 to PCB-mediated stress. Appl Environ Microbiol 72: 6607-6614.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 6607-6614
    • Parnell, J.1    Park, J.2    Denef, V.3    Tsoi, T.4    Hashsham, S.5    Quensen, J.R.6    Tiedje, J.7
  • 22
    • 49449110210 scopus 로고    scopus 로고
    • Bacterial metabolism of polychlorinated biphenyls
    • Pieper D, Seeger M (2008) Bacterial metabolism of polychlorinated biphenyls. J Mol Microbiol Biot 15: 121-138.
    • (2008) J Mol Microbiol Biot , vol.15 , pp. 121-138
    • Pieper, D.1    Seeger, M.2
  • 24
    • 35348874187 scopus 로고    scopus 로고
    • Extraction and bioanalysis of the ecotoxicologically relevant fraction of contaminants in sediments
    • Puglisi E, Murk A, van den Berg H, Grotenhuis T (2007) Extraction and bioanalysis of the ecotoxicologically relevant fraction of contaminants in sediments. Environ Toxicol Chem 26: 2122-2128.
    • (2007) Environ Toxicol Chem , vol.26 , pp. 2122-2128
    • Puglisi, E.1    Murk, A.2    van den Berg, H.3    Grotenhuis, T.4
  • 25
    • 0034723199 scopus 로고    scopus 로고
    • Thioredoxin 2 is involved in the oxidative stress response in Escherichia coli
    • Ritz D, Patel H, Doan B, Zheng M, Aslund F, Storz G, Beckwith J (2000) Thioredoxin 2 is involved in the oxidative stress response in Escherichia coli. J Biol Chem 275: 2505-2512.
    • (2000) J Biol Chem , vol.275 , pp. 2505-2512
    • Ritz, D.1    Patel, H.2    Doan, B.3    Zheng, M.4    Aslund, F.5    Storz, G.6    Beckwith, J.7
  • 26
    • 33646106096 scopus 로고    scopus 로고
    • Degradation of aroclor 1242 dechlorination products in sediments by Burkholderia xenovorans LB400(ohb) and Rhodococcus sp. strain RHA1(fcb)
    • Rodrigues J, Kachel C, Aiello M, Quensen J, Maltseva O, Tsoi T, Tiedje J (2006) Degradation of aroclor 1242 dechlorination products in sediments by Burkholderia xenovorans LB400(ohb) and Rhodococcus sp. strain RHA1(fcb). Appl Environ Microbiol 72: 2476-2482.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 2476-2482
    • Rodrigues, J.1    Kachel, C.2    Aiello, M.3    Quensen, J.4    Maltseva, O.5    Tsoi, T.6    Tiedje, J.7
  • 27
    • 33646262058 scopus 로고    scopus 로고
    • Chromatographic analysis of monosaccharides in a forest soil profile: Analysis by gas chromatography after trifluoroacetic acid hydrolysis and reduction-acetylation
    • Rumpel C, Dignac MF (2006) Chromatographic analysis of monosaccharides in a forest soil profile: Analysis by gas chromatography after trifluoroacetic acid hydrolysis and reduction-acetylation. Soil Biol Biochem 38: 1478-1481.
    • (2006) Soil Biol Biochem , vol.38 , pp. 1478-1481
    • Rumpel, C.1    Dignac, M.F.2
  • 28
    • 0037224809 scopus 로고    scopus 로고
    • 2-Hydroxypenta-2, 4-dienoate metabolic pathway genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1
    • Sakai M, Miyauchi K, Kato N, Masai E, Fukuda M (2003) 2-Hydroxypenta-2, 4-dienoate metabolic pathway genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1. Appl Environ Microbiol 69: 427-433.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 427-433
    • Sakai, M.1    Miyauchi, K.2    Kato, N.3    Masai, E.4    Fukuda, M.5
  • 29
    • 0035209075 scopus 로고    scopus 로고
    • Alkyl hydroperoxide reductase is the primary scavenger of endogenous hydrogen peroxide in Escherichia coli
    • Seaver L, Imlay J (2001) Alkyl hydroperoxide reductase is the primary scavenger of endogenous hydrogen peroxide in Escherichia coli. J Bacteriol 183: 7173-7181.
    • (2001) J Bacteriol , vol.183 , pp. 7173-7181
    • Seaver, L.1    Imlay, J.2
  • 30
  • 33
    • 10944255832 scopus 로고    scopus 로고
    • Biodegradation of seven polychlorinated biphenyls by a newly isolated aerobic bacterium (Rhodococcus sp R04)
    • Yang XQ, Sun Y, Qian SJ (2004) Biodegradation of seven polychlorinated biphenyls by a newly isolated aerobic bacterium (Rhodococcus sp R04). J Ind Microbiol Biotechnol 31: 415-420.
    • (2004) J Ind Microbiol Biotechnol , vol.31 , pp. 415-420
    • Yang, X.Q.1    Sun, Y.2    Qian, S.J.3
  • 35
    • 33744808002 scopus 로고    scopus 로고
    • Thioredoxins in bacteria: functions in oxidative stress response and regulation of thioredoxin genes
    • Zeller T, Klug G (2006) Thioredoxins in bacteria: functions in oxidative stress response and regulation of thioredoxin genes. Naturwissenschaften 93: 259-266.
    • (2006) Naturwissenschaften , vol.93 , pp. 259-266
    • Zeller, T.1    Klug, G.2
  • 36
    • 0036624982 scopus 로고    scopus 로고
    • Challenges in applying microarrays to environmental studies
    • Zhou JZ, Thompson DK (2002) Challenges in applying microarrays to environmental studies. Curr Opin Biotechnol 13: 204-207.
    • (2002) Curr Opin Biotechnol , vol.13 , pp. 204-207
    • Zhou, J.Z.1    Thompson, D.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.