Transgenic perennial biofuel feedstocks and strategies for bioconfinement

Biofuels

Volumn 1, Issue 1, 2010, Pages 163-176

  Kausch, Albert P ^a   Hague, Joel ^a   Oliver, Melvin ^b   Li, Yi ^c   Daniell, Henry ^d   Mascia, Peter ^e   Watrud, Lidia S ^f   Stewart Jr , C Neal ^g  

^a UNIVERSITY OF RHODE ISLAND   (United States)

^b UNIVERSITY OF MISSOURI   (United States)

^c UNIVERSITY OF CONNECTICUT   (United States)

^d UNIVERSITY OF CENTRAL FLORIDA COLLEGE OF MEDICINE   (United States)

^e Ceres Inc   (United States)

^f U S ENVIRONMENTAL PROTECTION AGENCY   (United States)

^g UNIVERSITY OF TENNESSEE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIO-ENERGY; CELL WALL COMPOSITION; ECONOMIC AND ENVIRONMENTAL BENEFITS; END-USES; GENE FLOWS; HERBICIDE RESISTANCE; MALE STERILITY; NUTRIENT-USE EFFICIENCIES; PERENNIAL PLANTS; PLASTID GENOMES; RESTRICTION TECHNOLOGY; SALT TOLERANCE; TRANS-GENES; TRANSGENE EXPRESSION; TRANSGENICS; VEGETATIVE ORGANS;

BIOFUELS; FEEDSTOCKS; FORESTRY; GENE EXPRESSION; HERBICIDES;

PLANTS (BOTANY);

EID: 77958019268     PISSN: 17597269     EISSN: 17597277     Source Type: Journal    
DOI: 10.4155/bfs.09.11     Document Type: Review

References (59)

1. Robertson GP, Dale VH, Doering OC et al. Sustainable biofuels redux. Science 322(5898), 49-50 (2008).
2. Energy Policy Act 2005. HR 6-109th Congress: Energy Policy Act of 2005. Pub. L 109-158 42 USC 15801 (2005)
3. McLaughlin SB, de la Torre Ugarte DG, Garten CT et al. High-value renewable energy from prairie grasses. Environ. Sci. Tech. 36(10), 2122-2129 (2002)
4. McLaughlin SB, Adams Kszos L. Development of switchgrass (Panicum virgatum) as a bioenergy feedstock in the United States. Biomass Bioenergy 28(6), 515-535 (2005)
5. Morandini P, Salamini F. Plant biotechnology and breeding: Allied for years to come. Trends Plant Sci. 8(2), 70-75 (2003)
6. Lynd LR, Laser MS, Bransby D et al. How biotech can transform biofuels. Nat. Biotechnol. 26(2), 169-172 (2008)
7. Gressel J. Transgenics are imperative for biofuel crops. Plant Sci. 174(3), 246-263 (2008)
8. Yuan JS, Tiller KH, Al-Ahmad H, Stewart NR, Stewart CN. Plants to power: Bioenergy to fuel the future. Trends Plant Sci. 13(8), 421-429 (2008)
9. Sticklen MB. Plant genetic engineering for biofuel production: Towards affordable cellulosic ethanol. Nat. Rev. Genet. 9(6), 433-443 (2008)
10. Tuskan GA, DiFazio S, Jansson S et al. The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science 313(5793), 1596-1604 (2006)
11. Paterson AH, Bowers JE, Bruggmann R et al. The Sorghum bicolor genome and the diversification of grasses. Nature 457(7229), 551-556 (2009)
12. Stewart CNJ. Genetically Modified Planet: Environmental Impacts of Genetically Engineered Plants. Oxford University Press, NY, USA (2004)
13. Wolfenbarger LL, Phifer APR. The ecological risks and benefits of genetically engineered plants. Science 290(5499), 2088-2093 (2000)
14. Stewart CNJ. Biofuels and biocontainment. Nat. Biotechnol. 25(3), 283-284 (2007)
15. Vogel KP, Jung H-JG. Genetic modification of herbaceous plants for feed and fuel. Crit. Rev. Plant Sci. 20(1), 15-49 (2001)
16. Mallory-Smith C, Zapiola ML. Gene flow from glyphosate-resistant crops. Pest Manag. Sci. 64(4), 428-440 (2008)
17. Zapiola ML, Mallory-Smith CA, Thompson JH, Rue LJ, Campbell CK, Butler MD. Gene escape from glyphosate-resistent creeping bentgrass fields: Past, present and future. Proc. West. Soc. Weed Sci. 60, 82 (2007)
18. Zapiola ML, Campbell CK, Butler MD, Mallory-Smith CA. Escape and establishment of transgenic glyphosate-resistant creeping bentgrass Agrostis stolonifera in Oregon, USA: A 4-year study. J. Appl. Ecol. 45(2), 486-494 (2008)
19. Reichman JR, Watrud LS, Lee EH et al. Establishment of transgenic herbicide-resistant creeping bentgrass (Agrostis stolonifera L.) in nonagronomic habitats. Mol. Ecol. 15(13), 4243-4255 (2006)
20. Watrud LS, Lee EH, Fairbrother A et al. Evidence for landscape-level, pollen-mediated gene flow from genetically modified creeping bentgrass with CP4 EPSPS as a marker. Proc. Natl Acad. Sci. USA 101(40), 14533-14538 (2004)
21. Wipff JK, Fricker C. Gene flow from transgenic creeping bentgrass (Agrostis stolonifera L.) in the Willamette Valley, Oregon. Int. Turfgrass Soc. Res. J. 7, 9224-9242 (2001)
22. Belanger FC, Meagher TR, Day PR, Plumley K, Meyer WA. Interspecific hybridization between Agrostis stolonifera and related Agrostis species under field conditions. Crop Sci. 43(1), 240-246 (2003)
23. Stewart CN, Halfhill MD, Warwick SI. Transgene introgression from genetically modified crops to their wild relatives. Nat. Rev. Genet. 4(10), 806-817 (2003)
24. Association of Official Seed Analysts. Rules for Testing Seeds. Stillwater, OK, USA (2002)
25. Dunwell J, Ford CS. Desk study on technologies for biological containment of GM and non-GM crops. Department for Environment, Food and Rural Affairs (2005)
26. Fei S, Nelson E. Estimation of pollen viability, shedding pattern, and longevity of creeping bentgrass on artificial media. Crop Sci. 43(6), 2177-2181 (2003)
27. Stewart CJ. Pharming in crop commodities. Nat. Biotechnol. 26(11), 1222-1223 (2008)
28. Mariani C, Beuckeleer MD, Truettner J, Leemans J, Goldberg RB. Induction of male sterility in plants by a chimaeric ribonuclease gene. Nature 347(6295), 737-741 (1990)
29. Luo H, Lyznik LA, Gidoni D, Hodges TK. FLP-mediated recombination for use in hybrid plant production. Plant J. 23(3), 423-430 (2000)
30. De Block M, Debrouwer D, Moens T. The development of nuclear male sterility system in wheat: Expression of the barnase gene under the control of tapetum specific promoters. Theor. Appl. Genet. 95(1-2), 125-131 (1997)
31. Hanson DD, Hamilton DA, Travis JL, Bashe DM, Mascarenhas JP. Characterization of a pollen-specific cDNA clone from Zea mays and its expression. Plant Cell 1(2), 173-179 (1989)
32. Zou JT, Zhan XY, Wu HM, Wang H, Cheung AY. Characterization of a rice pollen-specific gene and its expression. Am. J. Bot. 81(5), 552-561 (1994)
33. Twell D, Wing R, Yamaguchi J, McCormick S. Isolation and expression of an anther-specific gene from tomato. Mol. Gen. Genet. 217(2-3), 240-245 (1989)
34. Theerakulpisut P, Xu H, Singh MB, Pettitt JM, Knox RB. Isolation and developmental expression of Bcp1, an anther-specific cDNA clone in Brassica campestris. Plant Cell 3(10), 1073-1084 (1991)
35. Xu H, Knox RB, Taylor PE, Singh MB. Bcp1, a gene required for male fertility in Arabidopsis. Proc. Natl Acad. Sci. USA 92(6), 2106-2110 (1995)
36. Goetz M, Godt DE, Guivarc'h A, Kahmann U, Chriqui D, Roitsch T. Induction of male sterility in plants by metabolic engineering of the carbohydrate supply. Proc. Natl Acad. Sci. USA 98(11), 6522-6527 (2001)
37. Jagannath A, Bandyopadhyay P, Arumugam N, Gupta V, Kumar P, Pental D. The use of spacer DNA fragment insulates the tissue-specific expression of a cytotoxic gene (barnase) and allows high-frequency generation of transgenic male sterile lines in Brassica juncea L. Mol. Breed. 8(1), 811-823 (2001)
38. Moffatt B, Somerville C. Positive selection for male-sterile mutants of Arabidopsis lacking adenine phosphoribosyl transferase activity. Plant Physiol. 86(4), 1150-1154 (1988)
39. Tsuchiya T, Toriyama K, Yoshikawa M, Ejiri S, Hinata K. Tapetum-specific expression of the gene for an endo-b-1,3-glucanase causes male sterility in transgenic tobacco. Plant Cell Physiol. 36(3), 487-494 (1995)
40. Lee J-Y, Aldemita RR, Hodges TK. Isolation of a tapetum-specific gene and promoter from rice. Int. Rice Res. Newsl. 212-213 (1996)
41. Hartley RW. Barnase and Barstar: Expression of its cloned inhibitor permits expression of a cloned ribonuclease. J. Mol. Biol. 202(4), 913-915 (1988)
42. Yui R, Iketani S, Mikami T, Kubo T. Antisense inhibition of mitochondrial pyruvate dehydrogenase E1a subunit in anther tapetum causes male sterility. Plant J. 34(1), 57-66 (2003)
43. He S, Abad AR, Gelvin SB, Mackenzie SA. A cytoplasmic male sterility-associated mitochondrial protein causes pollen disruption in transgenic tobacco. Proc. Natl Acad. Sci. USA 93(21), 11763-11768 (1996)
44. Ruiz ON, Daniell H. Engineering cytoplasmic male sterility via the chloroplast genome by expression of b-ketothiolase. Plant Physiol. 138(3), 1232-1246 (2005)
45. Verma D, Daniell H. Chloroplast vector systems for biotechnology applications. Plant Physiol. 145(4), 1129-1143 (2007)
46. Daniell H. Molecular strategies for gene containment in transgenic crops. Nat. Biotechnol. 20(6), 581-586 (2002)
47. Daniell H. Transgene containment by maternal inheritance: Effective or elusive? Proc. Natl Acad. Sci. USA 104(17), 6879-6880 (2007)
48. Ruf S, Karcher D, Bock R. Determining the transgene containment level provided by chloroplast transformation. Proc. Natl Acad. Sci. USA 104(17), 6998-7002 (2007)
49. Arlen PA, Falconer R, Cherukumilli S et al. Field production and functional evaluation of chloroplast-derived interferon-a2b. Plant Biotechnol. J. 5(4), 511-525 (2007)
50. Azhagiri AK, Maliga P. Exceptional paternal inheritance of plastids in Arabidopsis suggests that low-frequency leakage of plastids via pollen may be universal in plants. Plant J. 52(5), 817-823 (2007)
51. Svab Z, Maliga P. Exceptional transmission of plastids and mitochondria from the transplastomic pollen parent and its impact on transgene containment. Proc. Natl Acad. Sci. USA 104(17), 7003-7008 (2007)
52. Davoodi-Semiromi ASN, Daniell H. The green vaccine: A global strategy to combat infectious and autoimmune diseases. Hum. Vacc. 5(7), 488-493 (2009)
53. Verma D, Samson NP, Koya V, Daniell H. A protocol for expression of foreign genes in chloroplasts. Nat. Protocol. 3(4), 739-758 (2008)
54. Lee SM, Chung H, Yoo SH et al. Plastid transformation in the monocotyledonous cereal crop, rice (Oryza sativa) and transmission of transgenes to their progeny. Mol. Cells 21(3), 401-410 (2006)
55. Verma D, Jin S, Singh ND, Kolattukudy PE, Daniell H. Chloroplast-derived enzyme cocktails hydrolyse lignocellulosic biomass and release fermentable sugars. Plant Biotechnol. J. (2009) (In press)
56. Luo K, Duan H, Zhao D et al. "GM-gene-deletor": Fused loxP-FRT recognition sequences dramatically improve the efficiency of FLP or CRE recombinase on transgene excision from pollen and seed of tobacco plants. Plant Biotechnol. J. 5(2), 263-374 (2007)
57. Bradford KJ, Van Deynze A, Gutterson N, Parrott W, Strauss SH. Regulating transgenic crops sensibly: Lessons from plant breeding, biotechnology and genomics. Nat. Biotechnol. 23(4), 439-444 (2005)
58. Chen F, Dixon RA. Lignin modification improves fermentable sugar yields for biofuel production. Nat. Biotechnol. 25(7), 759-761 (2007)
59. Campbell JE, Lobell DB, Field CB. Greater transportation energy and GHG offsets from bioelectricity than ethanol. Science 324(5930), 1055-1057 (2009).