Diuron biotransformation and its effects on biofilm bacterial community structure

Chemosphere

Volumn 81, Issue 7, 2010, Pages 837-843

  Vercraene Eairmal, Marion ^a   Lauga, Béatrice ^a   Saint Laurent, Stéphanie ^a   Mazzella, Nicolas ^b   Boutry, Sébastien ^b   Simon, Maryse ^a   Karama, Solange ^a   Delmas, François ^b   Duran, Robert ^a  

^a UNIVERSITÉ DE PAU ET DES PAYS DE L'ADOUR   (France)

^b CEMAGREF   (France)

Author keywords

Biotransformation; Diuron; Epilithic biofilms; Microcosms; POCIS

Indexed keywords

BACTERIA; BIOFILMS; CHEMICAL ANALYSIS; ECOSYSTEMS; METABOLITES; RIVER POLLUTION; URBAN GROWTH; UREA;

BIOTRANSFORMATION; DIURON; EPILITHIC BIOFILMS; MICROCOSMS; POCIS;

HERBICIDES;

DIURON;

BACTERIUM; BIOFILM; BIOTRANSFORMATION; COMMUNITY STRUCTURE; CONCENTRATION (COMPOSITION); HERBICIDE; METABOLITE; MICROCOSM; MOLECULAR ANALYSIS; POLYMORPHISM;

ARTICLE; BIOFILM; BIOTRANSFORMATION; DNA FINGERPRINTING; MICROBIAL COMMUNITY; MICROCOSM; NONHUMAN; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RIVER ECOSYSTEM;

AQUITAINE; FRANCE; GAVE DE PAU;

BACTERIA (MICROORGANISMS);

EID: 77957749485     PISSN: 00456535     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.chemosphere.2010.08.014     Document Type: Article

References (37)

1. Alvarez D., Petty J., Huckins J., Jones-Lepp T., Getting D., Goddard J., Manahan S. Development of a passive, in situ, integrative sampler for hydrophilic organic contaminants in aquatic environments. Environ. Toxicol. Chem. 2004, 23:1640-1648.
2. Bordenave S., Goñi Urriza M., Caumette P., Duran R. Effects of heavy fuel oil on the bacterial community structure of a pristine microbial mat. Appl. Environ. Microb. 2007, 73:6089-6097.
3. Brignon J.M., Gouzy A. Données technico-économiques sur les substances chimiques en France - Diuron. INERIS 2007, 1-35.
4. Bruneel O., Duran R., Casiot C., Elbaz-Poulichet F., Personné J.C. Diversity of microorganisms in Fe-As-rich acid mine drainage waters of Carnoulès, France. Appl. Environ. Microb. 2006, 72:551-556.
5. Calvet, R., Barriuso, E., Bedos, C., Benoit, P., Charnay, M., Coquet, Y., 2005. Dégradation des pesticides. In: Les pesticides dans le sol. Conséquences agronomiques et environnementales, France Agricole Edition, pp. 161-233.
6. Dionex, 2001. Determination of Inorganic Anions in Wastewater by Ion Chromatography. Application Note 135. Dionex Corporation. http://www.dionex.com.
7. EU, 1967. Directive 67/548/EEC on the approximation of the laws, regulations and administrative provisions of the member states relating to the classification, packaging and labelling of dangerous substances. Off. J. Eur. Commun., 1-98.
8. Giacomazzi S., Cochet N. Environmental impact of diuron transformation: a review. Chemosphere 2004, 56:1021-1032.
9. Hildrew A. Sustained research on stream communities. A model system and the comparative approach. Adv. Ecol. Res. 2009, 41:175-312.
10. Hothorn, T., Hornik, K., 2006. exactRankTests: Exact Distributions for Rank and Permutation Tests. R Package Version 0.8-18 .
11. Huckins J., Petty J., Lebo J., Almeida F., Booij K., Alvarez D., Cranor W., Clark R., Mogensen B. Development of the permeability/performance reference compound approach for in situ calibration of semipermeable membrane devices. Environ. Sci. Technol. 2002, 36:85-91.
12. Jackson C., Churchill P., Roden E. Successional changes in bacterial assemblage structure during epilithic biofilm development. Ecology 2001, 82:555-566.
13. Jefferson K. What drives bacteria to produce a biofilm?. FEMS Microbiol. Lett. 2004, 236:163-173.
14. Kiely, T., Donaldson, D., Grube, A., 2004. Pesticides industry sales and usage: 2000 and 2001 market estimate. US Environmental Protection Agency, pp. 1-33.
15. Lane D. 16S/23S rRNA sequencing. Nucleic Acid Techniques in Bacterial Systematics 1991, 115-175. John Wiley and Sons, New York, NY. E. Stackedrandt, M. Goodfellow (Eds.).
16. Lawrence J., Kopf G., Headley J., Neu T. Sorption and metabolism of selected herbicides in river biofilm communities. Can. J. Microbiol. 2001, 47:634-641.
17. Loos R., Gawlik B., Locoro G., Rimaviciute E., Contini S., Bidoglio G. EU-wide survey of polar organic persistent pollutants in European river waters. Environ. Pollut. 2009, 157:561-568.
18. Lyautey E., Boulêtreau S., Madigou E., Garabtian F. Viability of differentiated epilithic bacterial communities in the river Garonne (SW France). Hydrobiologia 2010, 637:207-218.
19. Marchesi J., Sato T., Weightman A., Martin T., Fry J., Hiom S., Dymock D., Wade W. Design and evaluation of useful bacterium-specific PCR primers that amplify genes coding for bacterial 16S rRNA. Appl. Environ. Microb. 1998, 64:795-799.
20. Mazzella N., Delmas F., Delest B., Méchin B., Madigou C., Allenou J.P., Gabellec R., Caquet T. Investigation of the matrix effects on a HPLC-ESI-MS/MS method and application for monitoring triazine, phenylurea and chloroacetanilide concentrations in fresh and estuarine waters. J. Environ. Monit. 2009, 11:108-115.
21. Mazzella N., Lissalde S., Moreira S., Delmas F., Mazellier P., Huckins J. Evaluation of the use of performance reference compounds in an Oasis-HLB adsorbent based passive sampler for improving water concentration estimates of polar herbicides in freshwater. Environ. Sci. Technol. 2010, 44:1713-1719.
22. MEDD, Water Agencies, 2003. Système d'évaluation de la qualité de l'eau des cours d'eau, grilles d'évaluation SEQ-Eau - Version 2, pp. 1-40.
23. Oudin, L., Maupas, D., 1999. Système d'évaluation de la qualité de l'eau des cours d'eau, Rapport de présentation SEQ-Eau. Étude Inter Agences, vol. 52, p. 59.
24. Païssé S., Coulon F., Goñi Urriza M., Peperzak L., McGenity T., Duran R. Structure of bacterial communities along a hydrocarbon contamination gradient in a coastal sediment. FEMS Microbiol. Ecol. 2008, 66:295-305.
25. Paule A., Lyautey E., Garabetian F., Rols J.L. Autogenic versus environmental control during development of river biofilm. Ann. Limnol. - Int. J. Lim. 2009, 45:1-10.
26. Pesce S., Bardot C., Lehours A.C., Batisson I., Bohatier J., Fajon C. Effects of diuron in microcosms on natural riverine bacterial community composition: new insight into phylogenetic approaches using PCR-TTGE analysis. Aquat. Sci. 2008, 70:410-418.
27. Pesce S., Fajon C., Bardot C., Bonnemoy F., Portelli C., Bohatier J. Effects of the phenylurea herbicide diuron on natural riverine microbial communities in an experimental study. Aquat. Toxicol. 2006, 78:303-314.
28. R Development Core Team, 2009. A Language and Environment for Statistical Computing. R Foundation for Statistical Computing. Vienna, Austria.
29. Ricart M., Barcelo D., Geiszinger A., Guasch H., Alda M., Romani A., Vidal G., Villagrasa M., Sabater S. Effects of low concentrations of the phenylurea herbicide diuron on biofilm algae and bacteria. Chemosphere 2009, 76:1392-1401.
30. Shapir N., Mongodin E., Sadowsky M., Daugherty S., Nelson K., Wackett L. Evolution of catabolic pathways: genomic insights into microbial s-triazine metabolism. J. Bacteriol. 2007, 189:674-682.
31. Smith C., Danilowicz B., Clear A., Costello F., Wilson B., Meijer W. T-Align, a web-based tool for comparison of multiple terminal restriction fragment length polymorphism profiles. FEMS Microbiol. Ecol. 2005, 54:375-380.
32. Sørensen S., Albers C., Aamand J. Rapid mineralization of the phenylurea herbicide diuron by Variovorax sp. strain SRS16 in pure culture and within a two-member consortium. Appl. Environ. Microb. 2008, 74:2332-2340.
33. Sørensen S., Bending G., Jacobsen C., Walker A., Aamand J. Microbial degradation of isoproturon and related phenylurea herbicides in and below agricultural fields. FEMS Microbiol. Ecol. 2003, 45:1-11.
34. Stasinakis A., Kotsifa S., Gatidou G., Mamais D. Diuron biodegradation in activated sludge batch reactors under aerobic and anoxic conditions. Water Res. 2009, 43:1471-1479.
35. Sun J.Q., Huang X., Chen Q.L., Liang B., Qiu J.G., Ali S., Li S.P. Isolation and characterization of three Sphingobium sp. strains capable of degrading isoproturon and cloning of the catechol 1,2-dioxygenase gene from these strains. World J. Microbiol. Biotechnol. 2009, 25:259-268.
36. Tlili A., Dorigo U., Montuelle B., Margoum C., Carluer N., Gouy V., Bouchez A., Bérard A. Responses of chronically contaminated biofilms to short pulses of diuron. An experimental study simulating flooding events in a small river. Aquat. Toxicol. 2008, 87:252-263.
37. Trégouët B., Nirascou F. Les pesticides dans les eaux, données 2003 et 2004. Les dossiers IFEN 2006, 5:1-40.