Co-circulation of two extremely divergent serotype SAT 2 lineages in Kenya highlights challenges to foot-and-mouth disease control

Archives of Virology

Volumn 155, Issue 10, 2010, Pages 1625-1630

  Sangula, A K ^a,d   Belsham, G J ^b   Muwanika, V B ^a   Heller, R ^c   Balinda, S N ^a   Siegismund, H R ^c  

^a MAKERERE UNIVERSITY   (Uganda)

^b TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^c UNIVERSITY OF COPENHAGEN   (Denmark)

^d Wellcome Inst Res Foot and Mouth Dis   (Kenya)

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; VP1 PROTEIN, FOOT AND MOUTH DISEASE VIRUS; VP1 PROTEIN, FOOT-AND-MOUTH DISEASE VIRUS;

ANIMAL; ARTICLE; CELL LINE; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; FOOT AND MOUTH DISEASE; FOOT AND MOUTH DISEASE VIRUS; GENETIC VARIABILITY; GENETICS; GENOTYPE; HAMSTER; ISOLATION AND PURIFICATION; KENYA; MOLECULAR EPIDEMIOLOGY; PHYLOGENY; SEQUENCE HOMOLOGY; SEROTYPING; VIROLOGY; FOOT-AND-MOUTH DISEASE;

ANIMALS; CAPSID PROTEINS; CELL LINE; CLUSTER ANALYSIS; CRICETINAE; FOOT-AND-MOUTH DISEASE; FOOT-AND-MOUTH DISEASE VIRUS; GENETIC VARIATION; GENOTYPE; KENYA; MOLECULAR EPIDEMIOLOGY; PHYLOGENY; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; SEROTYPING;

FOOT-AND-MOUTH DISEASE VIRUS;

EID: 77957352504     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-010-0742-9     Document Type: Article

References (29)

1. Anderson EC, Doughty WJ, Anderson J, Paling R (1979) The pathogenesis of foot-and-mouth disease in the African buffalo (Syncerus caffer) and the role of this species in the epidemiology of the disease in Kenya. J Comp Pathol 89: 511-519.
2. Anderson EC, Doughty WJ, Spooner PR (1982) Variation in the thermal stability of isolates of foot and mouth disease type SAT 2 and its significance in the selection of vaccine strains. J Comp Pathol 92: 495-507.
3. Balinda SN, Belsham GJ, Masembe C, Sangula AK, Siegismund HR, Muwanika VB (2009) Molecular characterization of SAT 2 foot-and-mouth disease virus from post-outbreak slaughtered animals: implications for disease control in Uganda. Epidemiol Infect. doi: 10. 1017/S0950268809991427.
4. Bastos ADS, Boshoff CI, Keet D, Bengis RG, Thomson GR (2000) Natural transmission of foot-and-mouth disease virus between African buffalo (Syncerus caffer) and impala (Aepyceros melampus) in the Kruger National park, South Africa. Epidemiol Infect 124: 591-598.
5. Bastos ADS, Haydon DT, Sangare O, Boshoff CI, Edrich JL, Thomson GR (2003) The implications of virus diversity within the SAT 2 serotype for control of foot-and-mouth disease in sub-Saharan Africa. J Gen Virol 84: 1595-1606.
6. Bronsvoort BMDC, Parida S, Handel I, McFarland S, Fleming L, Hamblin P, Kock R (2008) Serological survey for foot-and-mouth disease virus in wildlife in eastern Africa and estimation of test parameters of a nonstructural protein enzyme-linked immunosorbent assay for buffalo. Clin Vaccine Immunol 15: 1003-1011.
7. Condy JB, Hedger RS, Hamblin C, Barnett ITR (1985) The duration of foot-and-mouth disease virus carrier state in African buffalo (i) in the individual animal and (ii) in a free-living herd. Comp lmmunol Microbiol Infect Dis 8: 259-265.
8. Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214. doi: 10. 1186/1471-2148-7-214.
9. Drummond AJ, Ashton B, Cheung M, Heled J, Kearse M, Moir R, Stones-Havas S, Thierer T, Wilson A (2009) Geneious v4. 6. http://www. geneious. com/.
10. Grubman MJ, Baxt B (2004) Foot-and-mouth disease. Clin Microbiol Rev 17: 465-493.
11. Knowles NJ, Samuel AR (1995) Polymerase chain reaction amplification and cycle sequencing of the 1D gene of foot-and-mouth disease viruses Session of the research group of the standing technical committee of the European commission for the control of foot-and-mouth disease. FAO, Rome, 19-22 September 1994, Vienna, Austria.
12. Knowles NJ, Samuel AR (2003) Molecular epidemiology of foot-and-mouth disease virus. Virus Res 91: 65-80.
13. Martin DP, Williamson C, Posada D (2005) RDP2: recombination detection and analysis from sequence alignments. Bioinformatics 21: 260-262.
14. Ndiritu CG, Ouldridge EJ, Head M, Rweyemamu MM (1983) A serological evaluation of 1979-1982 Kenyan foot-and-mouth disease type SAT 2 viruses. J Hyg 91: 335-341.
15. Ndiritu CG (1984) Foot and mouth disease virus antigenic variation and its implications on vaccines. Kenya Vet 8: 14-19.
16. Nylander JAA (2004) MrModeltest v2. Program distributed by the author Evolutionary Biology Centre, Uppsala University.
17. Pond SLK, Posada D, Gravenor MB, Woelk CH, Frost SDW (2006) Automated phylogenetic detection of recombination using a genetic algorithm. Mol Biol Evol 23: 1891-1901.
18. Rodriguez F, Oliver JL, Marfn A, Medina JR (1990) The general stochastic model of nucleotide substitution. J Theor Biol 142: 485-501.
19. Sangare O, Bastos ADS, Venter EH, Vosloo W (2004) A first molecular epidemiological study of SAT-2 type foot-and-mouth disease viruses in West Africa. Epidemiol Infect 132: 525-532.
20. Schierup MH, Hein J (2000) Recombination and the molecular clock. Mol Biol Evol 17: 1578-1579.
21. Schierup MH, Hein J (2000) Consequences of recombination on traditional phylogenetic analysis. Genetics 156: 879-891.
22. Sobrino F, Saiz M, Jimenez-Clavero MA, Nunez JI, Rosas MF, Baranowski E, Ley V (2001) Foot-and-mouth disease virus: a long known virus, but a current threat. Vet Res 32: 1-30.
23. Suchard MA, Weiss RE, Sinsheimer JS (2001) Bayesian selection of continuous-time markov chain evolutionary models. Mol Biol Evol 18: 1001-1013.
24. Swofford DL (2003) PAUP*. Phylogenetic analysis using parsimony (*and other methods), version 4. Sinauer Associates, Sunderland.
25. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
26. Thomson GR, Vosloo W, Bastos ADS (2003) Foot and mouth disease in wildlife. Virus Res 91: 145-161.
27. Tully DC, Fares MA (2008) The tale of a modern animal plague: tracing the evolutionary history and determining the time-scale for foot and mouth disease virus. Virology 382: 250-256.
28. Vosloo W, Bastos ADS, Kirkbride E, Esterhuysen JJ, van Rensburg DJ, Bengis RG, Keet DW, Thomson GR (1996) Persistent infection of African buffalo (Syncerus caffer) with SAT-type foot-and-mouth disease viruses: rate of fixation of mutations, antigenic change and interspecies transmission. J Gen Virol 77: 1457-1467.
29. Vosloo W, Bastos ADS, Sangare O, Hargreaves SK, Thomson GR (2002) Review of the status and control of foot and mouth disease in sub-Saharan Africa. Rev Sci Tec Off Int Epiz 21: 437-447.