Aquifex aeolicus membrane hydrogenase for hydrogen biooxidation: Role of lipids and physiological partners in enzyme stability and activity

International Journal of Hydrogen Energy

Volumn 35, Issue 19, 2010, Pages 10778-10789

  Infossi, Pascale ^a   Lojou, Elisabeth ^a   Chauvin, Jean Paul ^c   Herbette, Gaetan ^b   Brugna, Myriam ^a,b   Giudici Orticoni, Marie Thérse ^a  

^a CNRS   (France)

^b AIX MARSEILLE UNIVERSITY   (France)

^c AIX MARSEILLE UNIVERSITÉ   (France)

Author keywords

Aquifex; Biohydrogen; Electrochemistry; Hydrogenase; Liposome; Quinone

Indexed keywords

CATALYTIC OXIDATION; EFFICIENCY; ELECTROCHEMISTRY; FUEL CELLS; HYDROGEN; LIPOSOMES; PHYSIOLOGY; SURFACE PLASMON RESONANCE;

AQUIFEX; BIO-HYDROGEN; BIOTECHNOLOGICAL DEVICES; CATALYTIC EFFICIENCIES; ENZYMATIC EFFICIENCY; HYDROGENASES; HYPERTHERMOPHILIC BACTERIA; QUINONE;

ENZYME ACTIVITY;

EID: 77957276541     PISSN: 03603199     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ijhydene.2010.02.054     Document Type: Article

References (43)

1. K. Arnold, L. Bordoli, J. Kopp, and T. Schwede The SWISS-MODEL workspace: a web-based environment for protein structure homology modeling Bioinformatics 22 2006 195 201
2. F. Baymann, E. Lebrun, M. Brugna, B. Schoepp-Cothenet, M.T. Giudici-Orticoni, and W. Nitschke The redox protein construction kit: pre-last universal common ancestor evolution of energy-conserving enzymes Philos Trans R Soc Lond B 358 2002 267 274
3. B.C. Berks, M.D. Page, D.J. Richardson, A. Reilly, A. Cavill, and F. Outen Sequence analysis of subunits of the membrane-bound nitrate reductase from a denitrifying bacterium: the integral membrane subunit provides a prototype for the diheme electron-carrying arm of a redox loop Mol Microbiol 15 1995 319 331
4. M. Bernhard, B. Benelli, A. Hochkoeppler, D. Zannoni, and B. Friedrich Functional and structural role of the cytochrome b subunit of the membrane-bound hydrogenase complex of Alcaligenes eutrophus H16 Eur J Biochem 248 1997 170 186
5. M. Besenicar, P. Macek, J.H. Lekey, and G. Anderluh Surface Plasmon Resonance in protein-membrane interactions Chem Phys Lipids 141 2006 169 178
6. P. Bianco, and J. Haladjian Lipid-modified pyrolytic graphite electrodes for the study of negatively charged species Electroanalysis 7 1995 442 446
7. M.M. Correia dos Santos, P. Paes de Sousa, M.L. Simoes Gonalves, L. Krippahl, J.J.G. Moura, and E. Lojou Electrochemical studies on small electron transfer proteins using membrane electrodes J Electroanal Chem 541 2003 153 162
8. P.L. Dutton Oxidation-reduction potential dependence of the interaction of cytochromes, bacteriochlorophyll and carotenoids at 77 degrees K in chromatophores of Chromatium D and Rhodopseudomonas gelatinosa Biochim Biophys Acta 226 1971 63 80
9. 2 Mol Microbiol 30 1998 639 646
10. R. Gross, J. Simon, F. Theis, and A. Kröger Two membrane anchors of Wolinella succinogenes hydrogenase and their function in fumarate and polysulfide respiration Arch Microbiol 170 1998 50 58
11. R. Gross, R. Pisa, M. Sänge, C. Lancaster, D. Roy, and J. Simon Characterization of the menaquinone reduction site in the diheme cytochrome b membrane anchor of Wolinella succinogenes NiFe hydrogenase J Biol Chem 279 2004 274 281
12. M. Guiral, P. Tron, V. Belle, C. Aubert, C. Léger, and B. Guigliarelli Hyperthermostable and oxygen resistant hydrogenases from a hyperthermophilic bacterium Aquifex aeolicus: physicochemical properties Int J Hydrogen Energy 31 2006 1424 1431
13. M. Guiral-Brugna, P. Tron, W. Nitschke, K. Stetter, B. Burlat, and B. Guigliarelli Hyperthermostable and oxygen resistant hydrogenases from a hyperthermophilic bacterium Aquifex aeolicus: physicochemical properties Extremophiles 7 2003 145 157
14. H. Hemmi, Y. Takahashi, K. Shibuya, T. Nakayama, and T. Nishino Menaquinone-specific prenyl reductase from the hyperthermophilic archaeon Archaeoglobus fulgibus J Bacteriol 187 2005 1937 1944
15. D. Higgings, J. Thompson, and T. Gibson CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucl Acids Res 22 1994 4673 4680
16. A. Hiraishi, T. Umezawa, H. Yamamoto, K. Kato, and Y. Maki Changes in quinone profiles of hot spring microbial mats with a thermal gradient Appl Environ Microbiol 65 1999 198 205
17. R. Holländer Correlation of the function of demethylmenaquinone in bacterial electron transport with its redox potential FEBS Lett 72 1976 98 100
18. S. Höning, D. Ricotta, M. Krauss, K. Späte, B. Spolaore, and A. Motley Phosphatidylinositol-(4,5)-bisphosphate regulates sorting signal recognition by the clathrin-associated adaptor complex AP2 Mol Cell 18 2005 519 531
19. J. Hoogvliet, L. Lievense, C. van Dijk, and C. Veeger Electron transfer between the hydrogenase from Desulfovibrio vulgaris Hildenborough and viologens Eur J Biochem 174 1988 273 280
20. R. Huber, and K.O. Stetter Discovery of hyperthermophilic microorganisms Methods Enzymol 330 2001 11 24
21. C. Hunte Specific protein-lipid interactions in membrane proteins Biochem Soc Trans 33 2005 938 942
22. M. Jormakka, S. Törnroth, B. Byrne, and S. Iwata Molecular basis of proton motive force generation: structure of formate dehydrogenase-N Science 295 2002 1863 1868
23. M.A. Larkin, G. Blackshields, N.P. Brown, R. Chenna, P.A. McGettigan, and H. McWilliam ClustalW and ClustalX version 2 Bioinformatics 23 2007 2947 2948
24. E. Lojou, and P. Bianco Membrane electrodes for protein and enzyme electrochemistry Electroanalysis 16 2004 1113 1121
25. 2oxidation at electrodes modified with carbon nanotubes J Biol Inorg Chem 13 2008 1157 1167
26. 2 oxidation J Biol Inorg Chem 14 2009 1275 1288
27. D. Marchal, W. Boireau, J.M. Laval, J. Moiroux, and C. Bourdillon An electrochemical approach of the redox behaviour of water insoluble ubiquinones or plastoquinones incorporated in supported phospholipid layers Biophys J 72 1997 2679 2687
28. R. Nicholson, and I. Shain Theory of stationary electrode polarography: single scan and cyclic methods applied to reversible, irreversible, and kinetic systems Anal Chem 36 1964 706 719
29. T. Ohtsuki, Y. Kita, T. Fujioka, D. Hashimoto, M. Shimosaka, and M. Okazaki The hupC gene product is a component of the electron transport system for hydrogen oxidation in Pseudomonas hydrogenovora FEMS Microbiol Lett 150 1997 127 133
30. L.S. Palágyi-Mészáros, J. Maróti, D. Latinovics, T. Balogh, E. Klement, and K.F. Medzihradszky Electron-transfer subunits of the NiFe hydrogenases in Thiocapsa roseopersicina BBS FEBS J 276 2009 164 174
31. 1 complexes of bacteria FEBS Lett 213 1987 107 112
32. 2 value Biochemistry 38 1999 8992 8999
33. J.L. Rigaud, and B. Pitard L.L. Phillippot, F. Schuber, Liposomes as tools in basic research and industry 1995 CRC Press Boca Raton, FL
34. J. Rusling Enzyme bioelectrochemistry in cast biomembrane-like films Acc Chem Res 31 1998 363 369
35. M. Saggu, I. Zebger, M. Ludwig, O. Lenz, B. Friedrich, and P. Hildebrandt Spectroscopic insights into the oxygen-tolerant membrane-associated [NiFe]-hydrogenase of Ralstonia eutropha H16 J Biol Chem 284 2009 16264 16276
36. L.A. Sayavedra-Soto, and D. Arp The hoxZ gene of the Azotobacter vinelandii hydrogenase operon is required for activation of hydrogenase J Bacteriol 174 1992 5295 5301
37. D. Scheide, R. Huber, and T. Friedrich The proton-pumping NADH:ubiquinone oxidoreductase (complex I) of Aquifex aeolicus FEBS Lett 512 2002 80 84
38. B. Schoepp-Cothenet, C. Lieutaud, F. Baymann, A. Verméglio, T. Friedrich, and D.M. Kramer Menaquinone as pool quinone in a purple bacterium Proc Natl Acad Sci U S A 106 2009 8549 8554
39. 1 complex of the hyperthermophilic Knallgasbacterium Aquifex aeolicus: properties and phylogenetic relationships Biochemistry 42 2003 10800 10808
40. T. Schwede, J. Kopp, N. Guex, and M.C. Peitsch SWISS-MODEL: an automated protein homology-modeling server Nucl Acids Res 31 2003 3381 3385
41. S. Shima, and K.I. Suzuki Hydrogenobacter acidophilus sp. Nov., a thermophilic, aerobic, hydrogen-oxidizing bacterium requiring elemental sulphur for growth Int J Syst Bacteriol 43 1993 703 708
42. R. Stöhr, A. Waberski, H. Völker, B.J. Tindall, and M. Thomm Hydrogenothermus marinus gen. nov., sp. Nov., a novel thermophilic hydrogen-oxidizing bacterium, recognition of Calderobacterium hydrogenophilum as a member of the genus Hydrogenobacter and proposal of the reclassification of Hydrogenobacter acidophilus as Hydrogenobaculum acidophilum gen. nov., comb. Nov., in the phylum "Hydrogenobacter/Aquifex" Int J Syst Evol Microbiol 51 2001 1853 1862
43. 2 sensitive and oxidative inactivation in hydrogenases J Am Chem Soc 127 2005 18179 18189