Phylogenetic analysis of six isolates of beak and feather disease virus from African grey parrots in Portugal

Avian Diseases

Volumn 54, Issue 3, 2010, Pages 1066-1071

  Henriques, A M ^a   Fagulha, T ^a   Duarte, M ^a   Ramos, F ^a   Barros, S ^a   Lus, T ^a   Bernardino, R ^b   Fevereiro, M ^a  

^a Laboratorio Nacional de Investigacao Veterinaria   (Portugal)

^b Jardim Zoológico de Lisboa ^*  (Portugal)

Author keywords

African grey parrot; BFDV; Circoviridae; circovirus; complete genome sequence

Indexed keywords

VIRUS DNA;

ANIMAL; ANIMAL DISEASE; ARTICLE; BIRD DISEASE; CIRCOVIRIDAE INFECTION; CIRCOVIRUS; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR EPIDEMIOLOGY; PARROT; PORTUGAL; VIROLOGY; VIRUS GENOME; BIRD DISEASES; CIRCOVIRIDAE INFECTIONS; VETERINARY;

ANIMALS; BIRD DISEASES; CIRCOVIRIDAE INFECTIONS; CIRCOVIRUS; DNA, VIRAL; GENOME, VIRAL; MOLECULAR EPIDEMIOLOGY; PARROTS; PORTUGAL;

BEAK AND FEATHER DISEASE VIRUS; CIRCOVIRIDAE; CIRCOVIRUS; PSITTACUS ERITHACUS;

EID: 77956988740     PISSN: 00052086     EISSN: None     Source Type: Journal    
DOI: 10.1637/9120-110309-RESNOTE.1     Document Type: Article

References (26)

1. Bassami, M. R., D. Berryman, G. E. Wilcox, and S. R. Raidal. Psittacine beak and feather disease virus nucleotide sequence analysis and its relationship to porcine circovirus, plant circoviruses, and chicken anaemia virus. Virology 249:453-459. 1998.
2. Bassami, M. R., I. Ypelaar, D. Berryman, G. E. Wilcox, and S. R. Raidal. Genetic diversity of beak and feather disease virus detected in psittacine species in Australia. Virology 279:392-400. 2001.
3. Bert, E., L. Tomassone, C. Peccati, N. G. Navarrete, and S. C. Sola. Detection of beak and feather disease virus (BFDV) and avian polyomavirus (APV) DNA in psittacine birds in Italy. J. Vet. Med. B52:64-68. 2005.
4. Crowther, R. A., J. A. Berriman, W. L. Curran, G. M. Allan, and D. Todd. Comparison of the structures of three circoviruses: chicken anemia virus, porcine circovirus type 2, and beak and feather disease virus. J. Virol. 77:13036-13041. 2003.
5. De Kloet, E., and S. R. De Kloet. Analysis of the beak and feather disease viral genome indicates the existence of several genotypes which have a complex psittacine host specificity. Arch. Virol. 149:2393-2412. 2004.
6. Heath, L., D. P. Martin, L. Warburton, M. Perrin, W. Horsfield, C. Kingsley, E. P. Rybicki, and A. L. Williamson. Evidence of unique genotypes of beak and feather disease virus in southern Africa. J. Virol. 78:9277-9284. 2004.
7. Huelsenbeck, J. P., and F. Ronquist. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755. 2001.
8. Ilyina, T. V., and E. V. Koonin. Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and Archaebacteria. Nucleic Acids Res. 20:3279-3285. 1992.
9. Johne, R., D. Fernandez-De-Luco, U. Hofle, and H. Muller. Genome of a novel circovirus of starlings, amplified by multiply primed rolling-circle amplification. J. Gen. Virol. 87:1189-1195. 2006.
10. Kondiah, K., J. Albertyn, and R. R. Bragg. Genetic diversity of the Rep gene of beak and feather disease virus in South Africa. Arch Virol. 151:2539-2545. 2006.
11. Liu, J., Y. Zhu, I. Chen, J. Lau, F. He, A. Lau, Z. Wang, A. K. Karuppannan, and J. Kwang. The ORF3 protein of porcine circovirus type 2 interacts with porcine ubiquitin E3 ligase Pirh2 and facilitates p53 expression in viral infection. J. Virol. 81:9560-9567. 2007.
12. Maddison, W. P., and D. R. Maddison. Mesquite: a modular system for evolutionary analysis. Version 2.71 ed. 2009. Available from: http://mesquiteproject.org
13. Mankertz, A., R. Caliskan, K. Hattermann, B. Hillenbrand, P. Kurzendoerfer, B. Mueller, C. Schmitt, T. Steinfeldt, and T. Finsterbusch. Molecular biology of porcine circovirus: analyses of gene expression and viral replication. Vet. Microbiol. 98:81-88. 2004.
14. Mankertz, A., K. Hattermann, B. Ehlers, and D. Soike. Cloning and sequencing of columbid circovirus (coCV), a new circovirus from pigeons. Arch. Virol. 145:2469-2479. 2000.
15. Pass, D. A., and R. A. Perry. Psittacine beak and feather disease: an update. Aust. Vet. Pract. 15:55-60. 1985.
16. Phenix, K. V., J. H. Weston, I. Ypelaar, A. Lavazza, J. A. Smyth, D. Todd, G. E. Wilcox, and S. R. Raidal. Nucleotide sequence analysis of a novel circovirus of canaries and its relationship to other members of the genus Circovirus of the family Circoviridae. J. Gen. Virol. 82:2805-2809. 2001.
17. Raidal, S. R., M. Sabine, and G. M. Cross. Laboratory diagnosis of psittacine beak and feather disease by haemagglutination and haemagglu-tination inhibition. Aust. Vet. J 70:133-137. 1993.
18. Ritchie, P. A., I. L. Anderson, and D. M. Lambert. Evidence for specificity of psittacine beak and feather disease viruses among avian hosts. Virology 306:109-115. 2003.
19. Ronquist, F., and J. P. Huelsenbeck. MrBayes 3: Bayesian phy-logenetic inference under mixed models. Bioinformatics 19:1572-1574. 2003.
20. Shang, S. B., Y. F. Li, J. Q. Guo, Z. T. Wang, Q. X. Chen, H. G. Shen, and J. Y. Zhou. Development and validation of a recombinant capsid protein-based ELISA for detection of antibody to porcine circovirus type 2. Res. Vet. Sci. 84:150-157. 2008.
21. Shearer, P. L., N. Bonne, P. Clark, M. Sharp, and S. R. Raidal. Beak and feather disease virus infection in cockatiels (Nymphicus hollandicus). Avian Pathol. 37:75-81. 2008.
22. Steinfeldt, T., T. Finsterbusch, and A. Mankertz. Demonstration of nicking/joining activity at the origin of DNA replication associated with the rep and rep' proteins of porcine circovirus type 1. J. Virol. 80:6225-6234. 2006.
23. Stewart, M. E., R. Perry, and S. R. Raidal. Identification of a novel circovirus in Australian ravens (Corvus coronoides) with feather disease. Avian Pathol. 35:86-92. 2006.
24. Thompson, J. D., D. G. Higgins, and T. J. Gibson. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680. 1994.
25. Todd, D., A. N. Scott, E. Fringuelli, H. L. Shivraprasad, D. Gavier-Widen, and J. A. Smyth. Molecular characterization of novel circoviruses from finch and gull. Avian Pathol. 36:75-81. 2007.
26. Todd, D., J. H. Weston, D. Soike, and J. A. Smyth. Genome sequence determinations and analyses of novel circoviruses from goose and pigeon. Virology 286:354-362. 2001.