메뉴 건너뛰기




Volumn 38, Issue 2, 2010, Pages 377-382

The utility of ITS2 in spider phylogenetics: Notes on prior work and an example from Anelosimus

Author keywords

DNA barcode; ITS2 secondary structure; Phylogeny; sociality; Theridiidae

Indexed keywords

ANELOSIMUS; ANIMALIA; ARANEAE; THERIDIIDAE;

EID: 77956692128     PISSN: 01618202     EISSN: None     Source Type: Journal    
DOI: 10.1636/B10-01.1     Document Type: Article
Times cited : (37)

References (29)
  • 1
    • 33646881561 scopus 로고    scopus 로고
    • A revision of the New World eximius lineage of Anelosimus (Araneae, Theridiidae) and a phylogenetic analysis using worldwide exemplars
    • Agnarsson, I. 2006. A revision of the New World eximius lineage of Anelosimus (Araneae, Theridiidae) and a phylogenetic analysis using worldwide exemplars. Zoological Journal of the Linnean Society 146:453-593.
    • (2006) Zoological Journal of the Linnean Society , vol.146 , pp. 453-593
    • Agnarsson, I.1
  • 2
    • 34248631963 scopus 로고    scopus 로고
    • The phylogeny of the social Anelosimus spiders (Araneae: Theridiidae) inferred from six molecular loci and morphology
    • Agnarsson, I., L. Avilés, J.A. Coddington & W.P. Maddison. 2007. The phylogeny of the social Anelosimus spiders (Araneae: Theridiidae) inferred from six molecular loci and morphology. Molecular Phylogenetics and Evolution 43:833-851.
    • (2007) Molecular Phylogenetics and Evolution , vol.43 , pp. 833-851
    • Agnarsson, I.1    Avilés, L.2    Coddington, J.A.3    Maddison, W.P.4
  • 3
    • 73349143623 scopus 로고    scopus 로고
    • Shifting continents, not behaviours: Independent colonization of solitary and subsocial Anelosimus spider lineages on Madagascar (Araneae, Theridiidae)
    • Agnarsson, I., M. Kuntner, J. Coddington & T.A. Blackledge. 2010. Shifting continents, not behaviours: independent colonization of solitary and subsocial Anelosimus spider lineages on Madagascar (Araneae, Theridiidae). Zoologica Scripta 39:75-87.
    • (2010) Zoologica Scripta , vol.39 , pp. 75-87
    • Agnarsson, I.1    Kuntner, M.2    Coddington, J.3    Blackledge, T.A.4
  • 5
    • 33748894007 scopus 로고    scopus 로고
    • Species diversification patterns in the Polynesian jumping spider genus Havaika PrószyńSki, 2001 (Araneae, Salticidae)
    • Arnedo, M.A. & R.G. Gillespie. 2006. Species diversification patterns in the Polynesian jumping spider genus Havaika Prószyński, 2001 (Araneae, Salticidae). Molecular Phylogenetics and Evolution 41:472-495.
    • (2006) Molecular Phylogenetics and Evolution , vol.41 , pp. 472-495
    • Arnedo, M.A.1    Gillespie, R.G.2
  • 6
    • 0002029066 scopus 로고    scopus 로고
    • Causes and consequences of cooperation and permanent-sociality in spiders
    • (J.C. Choe & B.J. Crespi, eds.). Cambridge University Press, Cambridge, UK
    • Avilés, L. 1997. Causes and consequences of cooperation and permanent-sociality in spiders. Pp. 476-498. In The Evolution of Social Insects and Arachnids. (J.C. Choe & B.J. Crespi, eds.). Cambridge University Press, Cambridge, UK.
    • (1997) The Evolution of Social Insects and Arachnids , pp. 476-498
    • Avilés, L.1
  • 8
    • 61849120412 scopus 로고    scopus 로고
    • An integrative method for delimiting cohesion species: Finding the population-species interface in a group of Californian trapdoor spiders with extreme genetic divergence and geographic structuring
    • Bond, J.E. & A. Stockman. 2008. An integrative method for delimiting cohesion species: finding the population-species interface in a group of Californian trapdoor spiders with extreme genetic divergence and geographic structuring. Systematic Biology 57:628-646.
    • (2008) Systematic Biology , vol.57 , pp. 628-646
    • Bond, J.E.1    Stockman, A.2
  • 9
    • 33947505571 scopus 로고    scopus 로고
    • ITS2 sequences as barcodes for identifying and analyzing spider mites (Acari: Tetranychidae)
    • Ben-David, T., S. Melamed, U. Gerson & S. Morin. 2007. ITS2 sequences as barcodes for identifying and analyzing spider mites (Acari: Tetranychidae). Experimental and Applied Acarology 41:169-181.
    • (2007) Experimental and Applied Acarology , vol.41 , pp. 169-181
    • Ben-David, T.1    Melamed, S.2    Gerson, U.3    Morin, S.4
  • 10
    • 33750972020 scopus 로고    scopus 로고
    • Incongruous nuclear and mitochondrial phylogeographic patterns in two sympatric lineages of the wolf spider Pardosa astrigera (Araneae: Lycosidae) from China
    • Chang, J., D. Song & K. Zhou. 2007. Incongruous nuclear and mitochondrial phylogeographic patterns in two sympatric lineages of the wolf spider Pardosa astrigera (Araneae: Lycosidae) from China. Molecular Phylogenetics and Evolution 42:104-121.
    • (2007) Molecular Phylogenetics and Evolution , vol.42 , pp. 104-121
    • Chang, J.1    Song, D.2    Zhou, K.3
  • 11
    • 57649155508 scopus 로고    scopus 로고
    • Is there a molecular key to the level of "biological species" in eukaryotes? A DNA guide
    • Coleman, A.W. 2009. Is there a molecular key to the level of "biological species" in eukaryotes? A DNA guide. Molecular Phylogenetics and Evolution 50:197-203.
    • (2009) Molecular Phylogenetics and Evolution , vol.50 , pp. 197-203
    • Coleman, A.W.1
  • 12
    • 0031405714 scopus 로고    scopus 로고
    • Speciation history in a diverse clade of habitat specialized spiders (Araneae: Nesticidae: Nesticus): Inferences from geographic-based sampling
    • Hedin, M.C. 1997. Speciation history in a diverse clade of habitat specialized spiders (Araneae: Nesticidae: Nesticus): inferences from geographic-based sampling. Evolution 51:1929-1945.
    • (1997) Evolution , vol.51 , pp. 1929-1945
    • Hedin, M.C.1
  • 13
    • 0037292560 scopus 로고    scopus 로고
    • Speciation on a conveyor belt: Sequential colonization of the Hawaiian Islands by Orsonwelles spiders (Araneae, Linyphiidae)
    • Hormiga, G., M. Arnedo & R.G. Gillespie. 2003. Speciation on a conveyor belt: sequential colonization of the Hawaiian Islands by Orsonwelles spiders (Araneae, Linyphiidae). Systematic Biology 52:70-88.
    • (2003) Systematic Biology , vol.52 , pp. 70-88
    • Hormiga, G.1    Arnedo, M.2    Gillespie, R.G.3
  • 14
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck, J.P. & F. Ronquist. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 16
    • 34248189677 scopus 로고    scopus 로고
    • Identification of genes suitable for DNA barcoding of morphologically indistinguishable Korean Halichondriidae sponges
    • Park, M.H., C.J. Sim, J. Baek & G.S. Min. 2007. Identification of genes suitable for DNA barcoding of morphologically indistinguishable Korean Halichondriidae sponges. Molecules and Cells 23:220-227.
    • (2007) Molecules and Cells , vol.23 , pp. 220-227
    • Park, M.H.1    Sim, C.J.2    Baek, J.3    Min, G.S.4
  • 17
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • Posada, D. & K.A. Crandall. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 18
    • 9644301241 scopus 로고    scopus 로고
    • Model selection and model averaging in phylogenetics: Advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests
    • Posada, D. & T.R. Buckley. 2004. Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests. Systematic Biology 53:793-808.
    • (2004) Systematic Biology , vol.53 , pp. 793-808
    • Posada, D.1    Buckley, T.R.2
  • 19
    • 58049121167 scopus 로고    scopus 로고
    • Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE
    • Seibel, P.N., T. Müller, T. Dandekar & M. Wolf. 2008. Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE. BMC Research Notes 1:91.
    • (2008) BMC Research Notes , vol.1 , pp. 91
    • Seibel, P.N.1    Müller, T.2    Dandekar, T.3    Wolf, M.4
  • 20
    • 15444361843 scopus 로고    scopus 로고
    • A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota
    • Schultz, J., S. Maisel, D. Gerlach, T. Müller & M. Wolf. 2005. A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota. RNA 11:361-364.
    • (2005) RNA , vol.11 , pp. 361-364
    • Schultz, J.1    Maisel, S.2    Gerlach, D.3    Müller, T.4    Wolf, M.5
  • 21
    • 67349271005 scopus 로고    scopus 로고
    • ITS2 sequence-structure analysis in phylogenetics: A how-to manual for molecular systematics
    • Schultz, J. & M. Wolf. 2009. ITS2 sequence-structure analysis in phylogenetics: A how-to manual for molecular systematics. Molecular Phylogenetics and Evolution 52:520-523.
    • (2009) Molecular Phylogenetics and Evolution , vol.52 , pp. 520-523
    • Schultz, J.1    Wolf, M.2
  • 22
    • 33751213606 scopus 로고    scopus 로고
    • 4SALE - A tool for synchronous RNA sequence and secondary structure alignment and editing
    • Seibel, P.N., T. Müller, T. Dandekar, J. Schultz & M. Wolf. 2006. 4SALE - A tool for synchronous RNA sequence and secondary structure alignment and editing. BMC Bioinformatics 7:498.
    • (2006) BMC Bioinformatics , vol.7 , pp. 498
    • Seibel, P.N.1    Müller, T.2    Dandekar, T.3    Schultz, J.4    Wolf, M.5
  • 23
    • 33745602480 scopus 로고    scopus 로고
    • A revision of the genus poltys in Australasia (Araneae: Araneidae)
    • Smith, H.M. 2006. A Revision of the Genus Poltys in Australasia (Araneae: Araneidae). Records of the Australian Museum 58:43-96.
    • (2006) Records of the Australian Museum , vol.58 , pp. 43-96
    • Smith, H.M.1
  • 24
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence align-ment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., D.G. Higgins & T.J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence align-ment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22:4673-4680.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 26
    • 0028064845 scopus 로고
    • Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
    • Yang, Z. 1994. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. Journal of Molecular Evolution 39:306-314.
    • (1994) Journal of Molecular Evolution , vol.39 , pp. 306-314
    • Yang, Z.1
  • 27
    • 0345832215 scopus 로고    scopus 로고
    • The advantages of the ITS2 region of the nuclear rDNA cistron for analysis of phylogenetic relationships of insects: A Drosophila example
    • Young, I. & A.W. Coleman. 2004. The advantages of the ITS2 region of the nuclear rDNA cistron for analysis of phylogenetic relationships of insects: a Drosophila example. Molecular Phylogenetics and Evolution 30:236-242.
    • (2004) Molecular Phylogenetics and Evolution , vol.30 , pp. 236-242
    • Young, I.1    Coleman, A.W.2
  • 28
    • 10344226735 scopus 로고    scopus 로고
    • ITS2 rDNA variation of two black widow species, Latrodectus mactans and Latrodectus hesperus (Araneae,Theridiidae)
    • Zhang, D., W.B. Cook & N.V. Horner. 2004. ITS2 rDNA variation of two black widow species, Latrodectus mactans and Latrodectus hesperus (Araneae,Theridiidae).Journal ofArachnology32:349-352.
    • (2004) Journal OfArachnology , vol.32 , pp. 349-352
    • Zhang, D.1    Cook, W.B.2    Horner, N.V.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.