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Volumn 23, Issue 10, 2010, Pages 2176-2184

Combining capture-recapture data and pedigree information to assess heritability of demographic parameters in the wild

Author keywords

Binary trait; Capture Recapture Animal Model; Cormack Jolly Seber model; Individual heterogeneity; State space model; Threshold model

Indexed keywords

BAYESIAN ANALYSIS; FITNESS; GENETIC ANALYSIS; GENETIC VARIATION; HERITABILITY; HETEROGENEITY; LIFE HISTORY TRAIT; MARKOV CHAIN; MONTE CARLO ANALYSIS; NATURAL SELECTION; PASSERINE; SURVIVAL; THRESHOLD; WILD POPULATION;

EID: 77956568033     PISSN: 1010061X     EISSN: 14209101     Source Type: Journal    
DOI: 10.1111/j.1420-9101.2010.02079.x     Document Type: Article
Times cited : (24)

References (44)
  • 1
    • 33748116522 scopus 로고    scopus 로고
    • Random regression models for male and female fertility evaluation using longitudinal binary data
    • Averill T, Rekaya R, Weigel K. Random regression models for male and female fertility evaluation using longitudinal binary data. J. Dairy Sci. 2006, 89:3681-3689.
    • (2006) J. Dairy Sci. , vol.89 , pp. 3681-3689
    • Averill, T.1    Rekaya, R.2    Weigel, K.3
  • 2
    • 33746890138 scopus 로고    scopus 로고
    • A thirty-year study of phenotypic and genetic variation of blue tits in Mediterranean habitat mosaics
    • Blondel J, Thomas DW, Charmantier A, Perret P, Bourgault P, Lambrechts MM. A thirty-year study of phenotypic and genetic variation of blue tits in Mediterranean habitat mosaics. Bioscience 2006, 56:661-674.
    • (2006) Bioscience , vol.56 , pp. 661-674
    • Blondel, J.1    Thomas, D.W.2    Charmantier, A.3    Perret, P.4    Bourgault, P.5    Lambrechts, M.M.6
  • 3
    • 65549128025 scopus 로고    scopus 로고
    • Contribution of capture-mark-recapture modeling to studies of evolution by natural selection
    • Thomson DL, Cooch EG, Conroy MJ., Series: Environmental and Ecological Statistics, Springer Science, New York
    • Cam E. Contribution of capture-mark-recapture modeling to studies of evolution by natural selection. Modeling Demographic Processes in Marked Populations 2009, 83-129. Thomson DLCooch EGConroy MJ. In, eds), pp, Series: Environmental and Ecological Statistics, Vol. 3, Springer Science, New York
    • (2009) Modeling Demographic Processes in Marked Populations , vol.3 , pp. 83-129
    • Cam, E.1
  • 5
    • 72049126989 scopus 로고    scopus 로고
    • U-CARE: Utilities for performing goodness of fit tests and manipulating CApture-REcapture data
    • Choquet R, Lebreton J-D, Gimenez O, Reboulet A, Pradel R. U-CARE: Utilities for performing goodness of fit tests and manipulating CApture-REcapture data. Ecography 2009, 32:1-4.
    • (2009) Ecography , vol.32 , pp. 1-4
    • Choquet, R.1    Lebreton, J.-D.2    Gimenez, O.3    Reboulet, A.4    Pradel, R.5
  • 8
    • 34249844086 scopus 로고    scopus 로고
    • Technical note: How to use WinBUGS to draw inferences in animal models
    • Damgaard LH. Technical note: How to use WinBUGS to draw inferences in animal models. J. Anim. Sci. 2007, 85:1363-1368.
    • (2007) J. Anim. Sci. , vol.85 , pp. 1363-1368
    • Damgaard, L.H.1
  • 9
    • 0030466297 scopus 로고    scopus 로고
    • A Bayesian analysis of mixed survival models
    • Ducrocq V, Casella G. A Bayesian analysis of mixed survival models. Genet. Sel. Evol. 1996, 28:505-529.
    • (1996) Genet. Sel. Evol. , vol.28 , pp. 505-529
    • Ducrocq, V.1    Casella, G.2
  • 12
    • 0001582213 scopus 로고    scopus 로고
    • Inference and monitoring convergence
    • Gilks WR, Richardson S, Spiegelhalter DJ., Chapman and Hall, London
    • Gelman A. Inference and monitoring convergence. Markov chain Monte Carlo in Practice 1996, 131-143. Gilks WRRichardson SSpiegelhalter DJ. In, eds), pp, Chapman and Hall, London
    • (1996) Markov chain Monte Carlo in Practice , pp. 131-143
    • Gelman, A.1
  • 13
    • 84867086419 scopus 로고    scopus 로고
    • Prior distributions for variance parameters in hierarchical models
    • Gelman A. Prior distributions for variance parameters in hierarchical models. Bayesian Anal. 2006, 1:515-533.
    • (2006) Bayesian Anal. , vol.1 , pp. 515-533
    • Gelman, A.1
  • 14
    • 25444484077 scopus 로고    scopus 로고
    • Posterior predictive assessment of model fitness via realized discrepancies (with discussion)
    • Gelman A, Meng X, Stern HS. Posterior predictive assessment of model fitness via realized discrepancies (with discussion). Stat. Sin. 1996, 6:733-807.
    • (1996) Stat. Sin. , vol.6 , pp. 733-807
    • Gelman, A.1    Meng, X.2    Stern, H.S.3
  • 15
    • 0001476298 scopus 로고
    • Theory and analysis of threshold characters
    • Gianola D. Theory and analysis of threshold characters. J. Anim. Sci. 1982, 54:1079-1096.
    • (1982) J. Anim. Sci. , vol.54 , pp. 1079-1096
    • Gianola, D.1
  • 16
    • 77951190231 scopus 로고    scopus 로고
    • Incorporating individual heterogeneity in studies on marked animals using numerical integration: capture-recapture mixed models
    • Gimenez O, Choquet R. Incorporating individual heterogeneity in studies on marked animals using numerical integration: capture-recapture mixed models. Ecology 2010, 91:951-957.
    • (2010) Ecology , vol.91 , pp. 951-957
    • Gimenez, O.1    Choquet, R.2
  • 17
  • 21
    • 0021603770 scopus 로고
    • A mixed-model procedure for analyzing ordered 1 categorical data
    • Harville D, Mee R. A mixed-model procedure for analyzing ordered 1 categorical data. Biometrics 1984, 40:393-408.
    • (1984) Biometrics , vol.40 , pp. 393-408
    • Harville, D.1    Mee, R.2
  • 22
    • 0017288665 scopus 로고
    • Simple method for computing inverse of a numerator relationship matrix used in prediction of breeding values
    • Henderson cR. Simple method for computing inverse of a numerator relationship matrix used in prediction of breeding values. Biometrics 1976, 32:69-83.
    • (1976) Biometrics , vol.32 , pp. 69-83
    • Henderson, C.1
  • 23
    • 0030305457 scopus 로고    scopus 로고
    • R: A language for data analysis and graphics
    • Ihaka R, Gentleman R. R: A language for data analysis and graphics. J. Comput. Graph. Stat. 1996, 5:299-314.
    • (1996) J. Comput. Graph. Stat. , vol.5 , pp. 299-314
    • Ihaka, R.1    Gentleman, R.2
  • 24
    • 2942724484 scopus 로고    scopus 로고
    • Estimating genetic parameters in natural populations using the 'animal model'
    • Kruuk L. Estimating genetic parameters in natural populations using the 'animal model'. Philos. Trans. R. Soc. Lond. B Biol. Sci. 2004, 359:873-890.
    • (2004) Philos. Trans. R. Soc. Lond. B Biol. Sci. , vol.359 , pp. 873-890
    • Kruuk, L.1
  • 26
    • 58549098760 scopus 로고    scopus 로고
    • New answers for old questions: the quantitative genetics of wild animal populations
    • Kruuk L, Slate J, Wilson A. New answers for old questions: the quantitative genetics of wild animal populations. Annu. Rev. Ecol. Evol. Syst. 2008, 35:525-548.
    • (2008) Annu. Rev. Ecol. Evol. Syst. , vol.35 , pp. 525-548
    • Kruuk, L.1    Slate, J.2    Wilson, A.3
  • 27
    • 0011373760 scopus 로고    scopus 로고
    • Variable selection for regression models
    • Kuo L, Mallick B. Variable selection for regression models. Sankhya Ser. B 1998, 60:6581.
    • (1998) Sankhya Ser. B , vol.60 , pp. 6581
    • Kuo, L.1    Mallick, B.2
  • 29
    • 0026490966 scopus 로고
    • Modeling survival and testing biological hypotheses using marked animals: A unified approach with case studies
    • Lebreton J-D, Burnham KP, Clobert J, Anderson DR. Modeling survival and testing biological hypotheses using marked animals: A unified approach with case studies. Ecol. Monogr. 1992, 62:67-118.
    • (1992) Ecol. Monogr. , vol.62 , pp. 67-118
    • Lebreton, J.-D.1    Burnham, K.P.2    Clobert, J.3    Anderson, D.R.4
  • 31
    • 0035706477 scopus 로고    scopus 로고
    • Explaining stasis: microevolutionary studies in natural populations
    • Merilä J, Sheldon B, Kruuk L. Explaining stasis: microevolutionary studies in natural populations. Genetica. 2001, 112-113:199-222.
    • (2001) Genetica. , vol.112-113 , pp. 199-222
    • Merilä, J.1    Sheldon, B.2    Kruuk, L.3
  • 32
    • 0001426561 scopus 로고    scopus 로고
    • Estimating covariance functions for longitudinal data using a random regression model
    • Meyer K. Estimating covariance functions for longitudinal data using a random regression model. Genet. Sel. Evol. 1998, 30:221-240.
    • (1998) Genet. Sel. Evol. , vol.30 , pp. 221-240
    • Meyer, K.1
  • 33
    • 77954693374 scopus 로고    scopus 로고
    • PEDANTICS: an R package for pedigree-1 based genetic simulation and pedigree manipulation, characterization and viewing
    • Morrissey M, Wilson A. PEDANTICS: an R package for pedigree-1 based genetic simulation and pedigree manipulation, characterization and viewing. Mol. Ecol. Resour. 2010, http://dx.doi.org/10.1111/j.1755-0998.2009.02817.x
    • (2010) Mol. Ecol. Resour.
    • Morrissey, M.1    Wilson, A.2
  • 34
    • 69249230467 scopus 로고    scopus 로고
    • A review of bayesian variable selection methods: what, how, and which
    • O'Hara R, Sillanpää M. A review of bayesian variable selection methods: what, how, and which. Bayesian Anal. 2009, 4:85-118.
    • (2009) Bayesian Anal. , vol.4 , pp. 85-118
    • O'Hara, R.1    Sillanpää, M.2
  • 36
    • 0001086681 scopus 로고
    • Transformed mixed model-equations - A recursive algorithm to eliminate A-1
    • Quaas RL. Transformed mixed model-equations - A recursive algorithm to eliminate A-1. J. Dairy Sci. 1989, 72:1937-1941.
    • (1989) J. Dairy Sci. , vol.72 , pp. 1937-1941
    • Quaas, R.L.1
  • 37
    • 43749112747 scopus 로고    scopus 로고
    • Modeling individual effects in the Cormack-Jolly-Seber model: a state-space formulation
    • Royle JA. Modeling individual effects in the Cormack-Jolly-Seber model: a state-space formulation. Biometrics 2008, 64:364-370.
    • (2008) Biometrics , vol.64 , pp. 364-370
    • Royle, J.A.1
  • 40
  • 41
    • 13444302396 scopus 로고    scopus 로고
    • R2WinBUGS: A package for running winbugs from r
    • Sturtz S, Ligges U, Gelman A. R2WinBUGS: A package for running winbugs from r. J. Stat. Softw. 2005, 12:1-16.
    • (2005) J. Stat. Softw. , vol.12 , pp. 1-16
    • Sturtz, S.1    Ligges, U.2    Gelman, A.3
  • 43
    • 34548382731 scopus 로고    scopus 로고
    • Quantifying the impact of longline fisheries on adult survival in the black-footed albatross
    • Véran S, Gimenez O, Flint E, Kendall B, Doherty P, Lebreton J-D. Quantifying the impact of longline fisheries on adult survival in the black-footed albatross. J. Appl. Ecol. 2007, 44:942-952.
    • (2007) J. Appl. Ecol. , vol.44 , pp. 942-952
    • Véran, S.1    Gimenez, O.2    Flint, E.3    Kendall, B.4    Doherty, P.5    Lebreton, J.-D.6
  • 44
    • 66249138821 scopus 로고    scopus 로고
    • Easy and flexible bayesian inference of quantitative genetic parameters
    • Waldmann P. Easy and flexible bayesian inference of quantitative genetic parameters. Evolution 2009, 63:1640-1643.
    • (2009) Evolution , vol.63 , pp. 1640-1643
    • Waldmann, P.1


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