-
1
-
-
33646138246
-
The metal- and DNA-binding activities of Helicobacter pylori NikR
-
Abraham, L. O., Y. Li, and D. B. Zamble. 2006. The metal- and DNA-binding activities of Helicobacter pylori NikR. J. Inorg. Biochem. 100:1005-1014.
-
(2006)
J. Inorg. Biochem.
, vol.100
, pp. 1005-1014
-
-
Abraham, L.O.1
Li, Y.2
Zamble, D.B.3
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
10744231694
-
Stimulating the in situ activity of Geobacter species to remove uranium from the groundwater of a uranium-contaminated aquifer
-
Anderson, R. T., H. A. Vrionis, I. Ortiz-Bernad, C. T. Resch, P. E. Long, R. Dayvault, K. Karp, S. Marutzky, D. R. Metzler, A. Peacock, D. C. White, M. Lowe, and D. R. Lovley. 2003. Stimulating the in situ activity of Geobacter species to remove uranium from the groundwater of a uranium-contaminated aquifer. Appl. Environ. Microbiol. 69:5884-5891.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 5884-5891
-
-
Anderson, R.T.1
Vrionis, H.A.2
Ortiz-Bernad, I.3
Resch, C.T.4
Long, P.E.5
Dayvault, R.6
Karp, K.7
Marutzky, S.8
Metzler, D.R.9
Peacock, A.10
White, D.C.11
Lowe, M.12
Lovley, D.R.13
-
4
-
-
0022254333
-
Nickel-containing hydrogenase isoenzymes from anaerobically grown Escherichia coli K-12
-
Ballantine, S. P., and D. H. Boxer. 1985. Nickel-containing hydrogenase isoenzymes from anaerobically grown Escherichia coli K-12. J. Bacteriol. 163:454-459.
-
(1985)
J. Bacteriol.
, vol.163
, pp. 454-459
-
-
Ballantine, S.P.1
Boxer, D.H.2
-
5
-
-
64049107915
-
An intact urease assembly pathway is required to compete with NikR for nickel ions in Helicobacter pylori
-
Benanti, E. L., and P. T. Chivers. 2009. An intact urease assembly pathway is required to compete with NikR for nickel ions in Helicobacter pylori. J. Bacteriol. 191:2405-2408.
-
(2009)
J. Bacteriol.
, vol.191
, pp. 2405-2408
-
-
Benanti, E.L.1
Chivers, P.T.2
-
6
-
-
34547130605
-
2+-dependent transcription factor NikR is required for specific DNA binding
-
2+-dependent transcription factor NikR is required for specific DNA binding. J. Biol. Chem. 282:20365-20375.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 20365-20375
-
-
Benanti, E.L.1
Chivers, P.T.2
-
7
-
-
0034714133
-
Interactions of Arg2 in the Mnt N-terminal arm with the central and flanking regions of the Mnt operator
-
Berggrun, A., and R. T. Sauer. 2000. Interactions of Arg2 in the Mnt N-terminal arm with the central and flanking regions of the Mnt operator. J. Mol. Biol. 301:959-973.
-
(2000)
J. Mol. Biol.
, vol.301
, pp. 959-973
-
-
Berggrun, A.1
Sauer, R.T.2
-
8
-
-
3543072246
-
Metal-selective DNA-binding response of Escherichia coli NikR
-
Bloom, S. L., and D. B. Zamble. 2004. Metal-selective DNA-binding response of Escherichia coli NikR. Biochemistry 43:10029-10038.
-
(2004)
Biochemistry
, vol.43
, pp. 10029-10038
-
-
Bloom, S.L.1
Zamble, D.B.2
-
9
-
-
0034730114
-
Methyl groups of thymine bases are important for nucleic acid recognition by DtxR
-
Chen, C. S., A. White, J. Love, J. R. Murphy, and D. Ringe. 2000. Methyl groups of thymine bases are important for nucleic acid recognition by DtxR. Biochemistry 39:10397-10407.
-
(2000)
Biochemistry
, vol.39
, pp. 10397-10407
-
-
Chen, C.S.1
White, A.2
Love, J.3
Murphy, J.R.4
Ringe, D.5
-
10
-
-
0344393488
-
Identification and characterization of the nickel uptake system for urease biogenesis in Streptococcus salivarius 57
-
Chen, Y. Y., and R. A. Burne. 2003. Identification and characterization of the nickel uptake system for urease biogenesis in Streptococcus salivarius 57.I. J. Bacteriol. 185:6773-6779.
-
(2003)
I. J. Bacteriol.
, vol.185
, pp. 6773-6779
-
-
Chen, Y.Y.1
Burne, R.A.2
-
11
-
-
0032697047
-
NikR is a ribbon-helix-helix DNA-binding protein
-
Chivers, P. T., and R. T. Sauer. 1999. NikR is a ribbon-helix-helix DNA-binding protein. Protein Sci. 8:2494-2500.
-
(1999)
Protein Sci.
, vol.8
, pp. 2494-2500
-
-
Chivers, P.T.1
Sauer, R.T.2
-
12
-
-
0036774881
-
NikR repressor: High-affinity nickel binding to the C-terminal domain regulates binding to operator DNA
-
Chivers, P. T., and R. T. Sauer. 2002. NikR repressor: high-affinity nickel binding to the C-terminal domain regulates binding to operator DNA. Chem. Biol. 9:1141-1148.
-
(2002)
Chem. Biol.
, vol.9
, pp. 1141-1148
-
-
Chivers, P.T.1
Sauer, R.T.2
-
13
-
-
0034733505
-
2+-Dependent interaction of NikR with wild-type and mutant operator sites
-
2+-Dependent interaction of NikR with wild-type and mutant operator sites. J. Biol. Chem. 275:19735-19741.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 19735-19741
-
-
Chivers, P.T.1
Sauer, R.T.2
-
14
-
-
17144395996
-
Structure of Pyrococcus horikoshii NikR: Nickel sensing and implications for the regulation of DNA recognition
-
Chivers, P. T., and T. H. Tahirov. 2005. Structure of Pyrococcus horikoshii NikR: nickel sensing and implications for the regulation of DNA recognition. J. Mol. Biol. 348:597-607.
-
(2005)
J. Mol. Biol.
, vol.348
, pp. 597-607
-
-
Chivers, P.T.1
Tahirov, T.H.2
-
15
-
-
0042065267
-
Characterization of the roles of NikR, a nickel-responsive pleiotropic autoregulator of Helicobacter pylori
-
DOI 10.1046/j.1365-2958.2003.03621.x
-
Contreras, M., J. M. Thiberge, M. A. Mandrand-Berthelot, and A. Labigne. 2003. Characterization of the roles of NikR, a nickel-responsive pleiotropic autoregulator of Helicobacter pylori. Mol. Microbiol. 49:947-963. (Pubitemid 36981341)
-
(2003)
Molecular Microbiology
, vol.49
, Issue.4
, pp. 947-963
-
-
Contreras, M.1
Thiberge, J.-M.2
Mandrand-Berthelot, M.-A.3
Labigne, A.4
-
16
-
-
33845505250
-
Helicobacter pylori HP1512 is a nickel-responsive NikR-regulated outer membrane protein
-
Davis, G. S., E. L. Flannery, and H. L. Mobley. 2006. Helicobacter pylori HP1512 is a nickel-responsive NikR-regulated outer membrane protein. Infect. Immun. 74:6811-6820.
-
(2006)
Infect. Immun.
, vol.74
, pp. 6811-6820
-
-
Davis, G.S.1
Flannery, E.L.2
Mobley, H.L.3
-
17
-
-
27744481253
-
In vitro analysis of protein-operator interactions of the NikR and fur metal-responsive regulators of coregulated genes in Helicobacter pylori
-
DOI 10.1128/JB.187.22.7703-7715.2005
-
Delany, I., R. Ieva, A. Soragni, M. Hilleringmann, R. Rappuoli, and V. Scarlato. 2005. In vitro analysis of protein-operator interactions of the NikR and fur metal-responsive regulators of coregulated genes in Helicobacter pylori. J. Bacteriol. 187:7703-7715. (Pubitemid 41587709)
-
(2005)
Journal of Bacteriology
, vol.187
, Issue.22
, pp. 7703-7715
-
-
Delany, I.1
Ieva, R.2
Soragni, A.3
Hilleringmann, M.4
Rappuoli, R.5
Scarlato, V.6
-
18
-
-
0032932493
-
Isolation and characterization of the nikR gene encoding a nickel-responsive regulator in Escherichia coli
-
De Pina, K., V. Desjardin, M. A. Mandrand-Berthelot, G. Giordano, and L. F. Wu. 1999. Isolation and characterization of the nikR gene encoding a nickel-responsive regulator in Escherichia coli. J. Bacteriol. 181:670-674.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 670-674
-
-
De Pina, K.1
Desjardin, V.2
Mandrand-Berthelot, M.A.3
Giordano, G.4
Wu, L.F.5
-
19
-
-
33847646219
-
Characterization of the Helicobacter pylori NikR-P(ureA) DNA interaction: Metal ion requirements and sequence specificity
-
Dosanjh, N. S., N. A. Hammerbacher, and S. L. Michel. 2007. Characterization of the Helicobacter pylori NikR-P(ureA) DNA interaction: metal ion requirements and sequence specificity. Biochemistry 46:2520-2529.
-
(2007)
Biochemistry
, vol.46
, pp. 2520-2529
-
-
Dosanjh, N.S.1
Hammerbacher, N.A.2
Michel, S.L.3
-
20
-
-
59249087478
-
Helicobacter pylori NikR's interaction with DNA: A two-tiered mode of recognition
-
Dosanjh, N. S., A. L. West, and S. L. Michel. 2009. Helicobacter pylori NikR's interaction with DNA: a two-tiered mode of recognition. Biochemistry 48:527-536.
-
(2009)
Biochemistry
, vol.48
, pp. 527-536
-
-
Dosanjh, N.S.1
West, A.L.2
Michel, S.L.3
-
21
-
-
41149129350
-
-
John Wiley & Sons, Inc., New York, NY. doi:10.1002/0471142727. mb0705s17. [Online.]
-
Eckert, R. L. 2001. DNA sequencing by the chemical method. John Wiley & Sons, Inc., New York, NY. doi:10.1002/0471142727.mb0705s17. [Online.]
-
(2001)
DNA Sequencing by the Chemical Method
-
-
Eckert, R.L.1
-
22
-
-
27744569940
-
The nickel-responsive regulator NikR controls activation and repression of gene transcription in Helicobacter pylori
-
Ernst, F. D., E. J. Kuipers, A. Heijens, R. Sarwari, J. Stoof, C. W. Penn, J. G. Kusters, and A. H. van Vliet. 2005. The nickel-responsive regulator NikR controls activation and repression of gene transcription in Helicobacter pylori. Infect. Immun. 73:7252-7258.
-
(2005)
Infect. Immun.
, vol.73
, pp. 7252-7258
-
-
Ernst, F.D.1
Kuipers, E.J.2
Heijens, A.3
Sarwari, R.4
Stoof, J.5
Penn, C.W.6
Kusters, J.G.7
Van Vliet, A.H.8
-
23
-
-
33845488317
-
NikR mediates nickel-responsive transcriptional repression of the Helicobacter pylori outer membrane proteins FecA3 (HP1400) and FrpB4 (HP1512)
-
Ernst, F. D., J. Stoof, W. M. Horrevoets, E. J. Kuipers, J. G. Kusters, and A. H. van Vliet. 2006. NikR mediates nickel-responsive transcriptional repression of the Helicobacter pylori outer membrane proteins FecA3 (HP1400) and FrpB4 (HP1512). Infect. Immun. 74:6821-6828.
-
(2006)
Infect. Immun.
, vol.74
, pp. 6821-6828
-
-
Ernst, F.D.1
Stoof, J.2
Horrevoets, W.M.3
Kuipers, E.J.4
Kusters, J.G.5
Van Vliet, A.H.6
-
24
-
-
33845993905
-
The proteomics of N-terminal methionine cleavage
-
Frottin, F., A. Martinez, P. Peynot, S. Mitra, R. C. Holz, C. Giglione, and T. Meinnel. 2006. The proteomics of N-terminal methionine cleavage. Mol. Cell Proteomics 5:2336-2349.
-
(2006)
Mol. Cell Proteomics
, vol.5
, pp. 2336-2349
-
-
Frottin, F.1
Martinez, A.2
Peynot, P.3
Mitra, S.4
Holz, R.C.5
Giglione, C.6
Meinnel, T.7
-
25
-
-
27144505097
-
Protein identification and analysis tools on the ExPASy Server
-
Humana Press, Inc., New York, NY
-
Gasteiger, E., H. C. A. Gattiker, S. Duvaud, M. R. Wilkins, R. D. Appel, and A. Bairoch. 2005. Protein identification and analysis tools on the ExPASy Server. In The proteomics protocols handbook. Humana Press, Inc., New York, NY.
-
(2005)
The Proteomics Protocols Handbook
-
-
Gasteiger, E.1
Gattiker, H.C.A.2
Duvaud, S.3
Wilkins, M.R.4
Appel, R.D.5
Bairoch, A.6
-
26
-
-
58549102477
-
Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments
-
Holmes, D. E., R. A. O'Neil, M. A. Chavan, L. A. N'Guessan, H. A. Vrionis, L. A. Perpetua, M. J. Larrahondo, R. DiDonato, A. Liu, and D. R. Lovley. 2009. Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments. ISME J. 3:216-230.
-
(2009)
ISME J.
, vol.3
, pp. 216-230
-
-
Holmes, D.E.1
O'Neil, R.A.2
Chavan, M.A.3
N'Guessan, L.A.4
Vrionis, H.A.5
Perpetua, L.A.6
Larrahondo, M.J.7
DiDonato, R.8
Liu, A.9
Lovley, D.R.10
-
27
-
-
34247542510
-
Nickel-specific response in the transcriptional regulator, Escherichia coli NikR
-
Leitch, S., M. J. Bradley, J. L. Rowe, P. T. Chivers, and M. J. Maroney. 2007. Nickel-specific response in the transcriptional regulator, Escherichia coli NikR. J. Am. Chem. Soc. 129:5085-5095.
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 5085-5095
-
-
Leitch, S.1
Bradley, M.J.2
Rowe, J.L.3
Chivers, P.T.4
Maroney, M.J.5
-
28
-
-
64849097266
-
The pH-responsive DNA-binding activity of Helicobacter pylori NikR
-
Li, Y., and D. Zamble. 2009. The pH-responsive DNA-binding activity of Helicobacter pylori NikR. Biochemistry 48:2486-2496.
-
(2009)
Biochemistry
, vol.48
, pp. 2486-2496
-
-
Li, Y.1
Zamble, D.2
-
30
-
-
44349112340
-
Targeted chemical wedges reveal the role of allosteric DNA modulation in protein-DNA assembly
-
Moretti, R., L. J. Donato, M. L. Brezinski, R. L. Stafford, H. Hoff, J. S. Thorson, P. B. Dervan, and A. Z. Ansari. 2008. Targeted chemical wedges reveal the role of allosteric DNA modulation in protein-DNA assembly. ACS Chem. Biol. 3:220-229.
-
(2008)
ACS Chem. Biol.
, vol.3
, pp. 220-229
-
-
Moretti, R.1
Donato, L.J.2
Brezinski, M.L.3
Stafford, R.L.4
Hoff, H.5
Thorson, J.S.6
Dervan, P.B.7
Ansari, A.Z.8
-
31
-
-
0038203196
-
Nickel uptake and utilization by microorganisms
-
Mulrooney, S. B., and R. P. Hausinger. 2003. Nickel uptake and utilization by microorganisms. FEMS Microbiol. Rev. 27:239-261.
-
(2003)
FEMS Microbiol. Rev.
, vol.27
, pp. 239-261
-
-
Mulrooney, S.B.1
Hausinger, R.P.2
-
32
-
-
0027482679
-
The nik operon of Escherichia coli encodes a periplasmic binding-protein-dependent transport system for nickel
-
Navarro, C., L. F. Wu, and M. A. Mandrand-Berthelot. 1993. The nik operon of Escherichia coli encodes a periplasmic binding-protein-dependent transport system for nickel. Mol. Microbiol. 9:1181-1191.
-
(1993)
Mol. Microbiol.
, vol.9
, pp. 1181-1191
-
-
Navarro, C.1
Wu, L.F.2
Mandrand-Berthelot, M.A.3
-
33
-
-
34248647893
-
TonB-dependent energy transduction between outer and cytoplasmic membranes
-
Postle, K., and R. A. Larsen. 2007. TonB-dependent energy transduction between outer and cytoplasmic membranes. Biometals 20:453-465.
-
(2007)
Biometals
, vol.20
, pp. 453-465
-
-
Postle, K.1
Larsen, R.A.2
-
34
-
-
0028147466
-
Major groove DNA recognition by β-sheets: The ribbon-helix-helix family of gene regulatory proteins
-
Raumann, B. E., B. M. Brown, and R. T. Sauer. 1994. Major groove DNA recognition by β-sheets: the ribbon-helix-helix family of gene regulatory proteins. Curr. Opin. Struct. Biol. 4:36-43.
-
(1994)
Curr. Opin. Struct. Biol.
, vol.4
, pp. 36-43
-
-
Raumann, B.E.1
Brown, B.M.2
Sauer, R.T.3
-
35
-
-
33644894229
-
Comparative and functional genomic analysis of prokaryotic nickel and cobalt uptake transporters: Evidence for a novel group of ATP-binding cassette transporters
-
Rodionov, D. A., P. Hebbeln, M. S. Gelfand, and T. Eitinger. 2006. Comparative and functional genomic analysis of prokaryotic nickel and cobalt uptake transporters: evidence for a novel group of ATP-binding cassette transporters. J. Bacteriol. 188:317-327.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 317-327
-
-
Rodionov, D.A.1
Hebbeln, P.2
Gelfand, M.S.3
Eitinger, T.4
-
36
-
-
24944576101
-
Complex transcriptional control links NikABCDE-dependent nickel transport with hydrogenase expression in Escherichia coli
-
Rowe, J. L., G. L. Starnes, and P. T. Chivers. 2005. Complex transcriptional control links NikABCDE-dependent nickel transport with hydrogenase expression in Escherichia coli. J. Bacteriol. 187:6317-6323.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 6317-6323
-
-
Rowe, J.L.1
Starnes, G.L.2
Chivers, P.T.3
-
37
-
-
0022376555
-
Differential expression of hydrogenase isoenzymes in Escherichia coli K-12: Evidence for a third isoenzyme
-
Sawers, R. G., S. P. Ballantine, and D. H. Boxer. 1985. Differential expression of hydrogenase isoenzymes in Escherichia coli K-12: evidence for a third isoenzyme. J. Bacteriol. 164:1324-1331.
-
(1985)
J. Bacteriol.
, vol.164
, pp. 1324-1331
-
-
Sawers, R.G.1
Ballantine, S.P.2
Boxer, D.H.3
-
38
-
-
33846627273
-
Novel nickel transport mechanism across the bacterial outer membrane energized by the TonB/ExbB/ExbD machinery
-
Schauer, K., B. Gouget, M. Carriere, A. Labigne, and H. de Reuse. 2007. Novel nickel transport mechanism across the bacterial outer membrane energized by the TonB/ExbB/ExbD machinery. Mol. Microbiol. 63:1054-1068.
-
(2007)
Mol. Microbiol.
, vol.63
, pp. 1054-1068
-
-
Schauer, K.1
Gouget, B.2
Carriere, M.3
Labigne, A.4
De Reuse, H.5
-
39
-
-
0141841775
-
Crystal structure of the nickel-responsive transcription factor NikR
-
Schreiter, E. R., M. D. Sintchak, Y. Guo, P. T. Chivers, R. T. Sauer, and C. L. Drennan. 2003. Crystal structure of the nickel-responsive transcription factor NikR. Nat. Struct. Biol. 10:794-799.
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 794-799
-
-
Schreiter, E.R.1
Sintchak, M.D.2
Guo, Y.3
Chivers, P.T.4
Sauer, R.T.5
Drennan, C.L.6
-
40
-
-
33748773334
-
NikR-operator complex structure and the mechanism of repressor activation by metal ions
-
Schreiter, E. R., S. C. Wang, D. B. Zamble, and C. L. Drennan. 2006. NikR-operator complex structure and the mechanism of repressor activation by metal ions. Proc. Natl. Acad. Sci. U. S. A. 103:13676-13681.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 13676-13681
-
-
Schreiter, E.R.1
Wang, S.C.2
Zamble, D.B.3
Drennan, C.L.4
-
41
-
-
47049094874
-
Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation
-
Shelobolina, E. S., H. A. Vrionis, R. H. Findlay, and D. R. Lovley. 2008. Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation. Int. J. Syst. Evol. Microbiol. 58:1075-1078.
-
(2008)
Int. J. Syst. Evol. Microbiol.
, vol.58
, pp. 1075-1078
-
-
Shelobolina, E.S.1
Vrionis, H.A.2
Findlay, R.H.3
Lovley, D.R.4
-
42
-
-
0026641755
-
Crystal structure of the met repressor- operator complex at 2.8 Å resolution reveals DNA recognition by beta-strands
-
Somers, W. S., and S. E. Phillips. 1992. Crystal structure of the met repressor- operator complex at 2.8 Å resolution reveals DNA recognition by beta-strands. Nature 359:387-393.
-
(1992)
Nature
, vol.359
, pp. 387-393
-
-
Somers, W.S.1
Phillips, S.E.2
-
43
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
44
-
-
0030835739
-
The complete genome sequence of the gastric pathogen Helicobacter pylori
-
Tomb, J. F., O. White, A. R. Kerlavage, R. A. Clayton, G. G. Sutton, R. D. Fleischmann, K. A. Ketchum, H. P. Klenk, S. Gill, B. A. Dougherty, K. Nelson, J. Quackenbush, L. Zhou, E. F. Kirkness, S. Peterson, B. Loftus, D. Richardson, R. Dodson, H. G. Khalak, A. Glodek, K. McKenney, L. M. Fitzegerald, N. Lee, M. D. Adams, E. K. Hickey, D. E. Berg, J. D. Gocayne, T. R. Utterback, J. D. Peterson, J. M. Kelley, M. D. Cotton, J. M. Weidman, C. Fujii, C. Bowman, L. Watthey, E. Wallin, W. S. Hayes, M. Borodovsky, P. D. Karp, H. O. Smith, C. M. Fraser, and J. C. Venter. 1997. The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature 388:539-547.
-
(1997)
Nature
, vol.388
, pp. 539-547
-
-
Tomb, J.F.1
White, O.2
Kerlavage, A.R.3
Clayton, R.A.4
Sutton, G.G.5
Fleischmann, R.D.6
Ketchum, K.A.7
Klenk, H.P.8
Gill, S.9
Dougherty, B.A.10
Nelson, K.11
Quackenbush, J.12
Zhou, L.13
Kirkness, E.F.14
Peterson, S.15
Loftus, B.16
Richardson, D.17
Dodson, R.18
Khalak, H.G.19
Glodek, A.20
McKenney, K.21
Fitzegerald, L.M.22
Lee, N.23
Adams, M.D.24
Hickey, E.K.25
Berg, D.E.26
Gocayne, J.D.27
Utterback, T.R.28
Peterson, J.D.29
Kelley, J.M.30
Cotton, M.D.31
Weidman, J.M.32
Fujii, C.33
Bowman, C.34
Watthey, L.35
Wallin, E.36
Hayes, W.S.37
Borodovsky, M.38
Karp, P.D.39
Smith, H.O.40
Fraser, C.M.41
Venter, J.C.42
more..
-
45
-
-
0030738589
-
Alternative respiratory pathways of Escherichia coli: Energetics and transcriptional regulation in response to electron acceptors
-
Unden, G., and J. Bongaerts. 1997. Alternative respiratory pathways of Escherichia coli: energetics and transcriptional regulation in response to electron acceptors. Biochim. Biophys. Acta 1320:217-234.
-
(1997)
Biochim. Biophys. Acta
, vol.1320
, pp. 217-234
-
-
Unden, G.1
Bongaerts, J.2
-
46
-
-
66349125424
-
The "metallo-specific" response of proteins: A perspective based on the Escherichia coli transcriptional regulator NikR
-
Wang, S. C., A. V. Dias, and D. B. Zamble. 2009. The "metallo- specific" response of proteins: a perspective based on the Escherichia coli transcriptional regulator NikR. Dalton Trans. 2009:2459-2466.
-
(2009)
Dalton Trans.
, vol.2009
, pp. 2459-2466
-
-
Wang, S.C.1
Dias, A.V.2
Zamble, D.B.3
-
47
-
-
0032581662
-
Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex
-
White, A., X. Ding, J. C. vanderSpek, J. R. Murphy, and D. Ringe. 1998. Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex. Nature 394:502-506.
-
(1998)
Nature
, vol.394
, pp. 502-506
-
-
White, A.1
Ding, X.2
VanderSpek, J.C.3
Murphy, J.R.4
Ringe, D.5
-
48
-
-
33750957661
-
Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information
-
Yan, B., C. Nunez, T. Ueki, A. Esteve-Nunez, M. Puljic, R. M. Adkins, B. A. Methe, D. R. Lovley, and J. Krushkal. 2006. Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information. Gene 384:73-95.
-
(2006)
Gene
, vol.384
, pp. 73-95
-
-
Yan, B.1
Nunez, C.2
Ueki, T.3
Esteve-Nunez, A.4
Puljic, M.5
Adkins, R.M.6
Methe, B.A.7
Lovley, D.R.8
Krushkal, J.9
-
49
-
-
64849111600
-
Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization
-
Zhang, Y., D. A. Rodionov, M. S. Gelfand, and V. N. Gladyshev. 2009. Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization. BMC Genomics 10:78.
-
(2009)
BMC Genomics
, vol.10
, pp. 78
-
-
Zhang, Y.1
Rodionov, D.A.2
Gelfand, M.S.3
Gladyshev, V.N.4
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