Differential gene expression of ligninolytic enzymes in Pleurotus ostreatus grown on olive oil mill wastewater

Applied Microbiology and Biotechnology

Volumn 88, Issue 2, 2010, Pages 541-551

  Goudopoulou, A ^a   Krimitzas, A ^a   Typas, Milton A ^a  

^a UNIVERSITY OF ATHENS   (Greece)

Author keywords

Gene expression; Laccases; Ligninolytic enzymes; Manganese peroxidases; Olive oil mill wastewater; Pleurotus ostreatus; Quantitative PCR

Indexed keywords

LACCASES; LIGNINOLYTIC ENZYMES; MANGANESE PEROXIDASES; OLIVE-OIL MILL WASTEWATERS; PLEUROTUS OSTREATUS; QUANTITATIVE PCR;

CATALYSTS; ENZYMES; MANGANESE; MANGANESE COMPOUNDS; PHENOLS; PLANTS (BOTANY); VEGETABLE OILS; WASTEWATER;

GENE EXPRESSION;

BETA TUBULIN; CUPRIC ION; LACCASE; LIGNIN; MANGANESE; MANGANESE PEROXIDASE; OLIVE OIL; PHENOL; WATER;

BIODEGRADATION; CATION; ENZYME; GENE EXPRESSION; GENETIC ANALYSIS; INDUSTRIAL WASTE; MUSHROOM; PHENOLIC COMPOUND; POLYMERASE CHAIN REACTION; VEGETABLE OIL; WASTEWATER;

ARTICLE; BACTERIAL GENE; BACTERIAL GROWTH; CONTROLLED STUDY; DEGRADATION; DOWN REGULATION; FUNGAL STRAIN; FUNGUS CULTURE; FUNGUS GROWTH; GENE EXPRESSION; GENETIC TRANSCRIPTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PLEUROTUS OSTREATUS; POX2 GENE; POXA1B GENE; POXA3 GENE; QUANTITATIVE ANALYSIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SSPOXA3A GENE; SSPOXA3B GENE; UPREGULATION; WASTE WATER;

CULTURE MEDIA; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENE EXPRESSION REGULATION, FUNGAL; INDUSTRIAL WASTE; LACCASE; LIGNIN; PEROXIDASES; PLANT OILS; PLEUROTUS; WASTE DISPOSAL, FLUID;

PLEUROTUS OSTREATUS;

EID: 77956196485     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-010-2750-9     Document Type: Article

References (60)

1. G Aggelis C Ehaliotis F Nerud I Stoychev G Lyberatos GI Zervakis 2002 Evaluation of white-rot fungi for detoxification and decolorization of effluents from the green olive debittering process Appl Microbiol Biotechnol 59 353 360 10.1007/s00253-002-1005-9
2. G Aggelis D Iconomou M Christou D Bokas S Kotzailias G Christou V Tsagou S Papanikolaou 2003 Phenolic removal in a model olive oil mill wastewater using Pleurotus ostreatus in bioreactor cultures and biological evaluation of the process Water Res 37 3897 3904 10.1016/S0043-1354(03)00313-0
3. SF Altschul TL Madden AA Schäffer J Zhang Z Zhang W Miller DJ Lipman 1997 Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res 25 3389 3402 10.1093/nar/25.17.3389
4. Y Asada A Watanabe T Irie T Nakayama M Kuwahara 1995 Structures of genomic and complementary DNAs coding for Pleurotus ostreatus manganese (II) peroxidase Biochim Biophys Acta 1251 205 209
5. P Baldrian 2005 Fungal laccases-occurrence and properties FEMS Microbiol Rev 20 1 28
6. O Ben Hamman T de la Rubia J Martínez 1999 Decolorization of olive oil mill wastewaters by Phanerochaete flavido-alba Environ Toxicol Chem 18 2410 2415
7. BW Bogan B Schoenicke RT Lamara D Cullen 1996 Manganese peroxidase mRNA and enzyme activity levels during bioremediation of polycyclic aromatic hydrocarbon-contaminated soil with Phanerochaete chrysosporium Appl Environ Microbiol 62 2381 2386
8. J-M Bollag A Leonowicz 1984 Comparative studies of extracellular fungal laccases Appl Environ Microbiol 48 849 854
9. JM Bollag KL Shuttleworth DH Anderson 1998 Laccase mediated detoxification of phenolic compounds Appl Environ Microbiol 54 3086 3091
10. R Bourbonnais MG Paice 1990 Oxidation of non-phenolic substrates. An expanded role for laccase in lignin biodegradation FEBS Lett 267 99 102 10.1016/0014-5793(90)80298-W
11. S Camarero S Sarkar FJ Ruiz-Dueñas MJ Martínez AT Martínez 1999 Description of versatile peroxidase involved in the natural degradation of lignin has both manganese and lignin peroxidase substrate interaction sites J Biol Chem 247 10324 10330 10.1074/jbc.274.15.10324
12. R Capasso A Evidente L Schivo G Orru MA Marcialis G Cristinzio 1995 Antibacterial polyphenols from olive oil mill waste waters J Appl Bacteriol 79 393 398
13. 2+ Environ Microbiol 3 312 322 10.1046/j.1462-2920.2001.00197.x
14. R Cohen L Persky Y Hadar 2002 Biotechnological applications and potential of wood-degrading mushrooms of the genus Pleurotus Appl Microbiol Biotechnol 58 582 594 10.1007/s00253-002-0930-y
15. Cullen D, Kersten PJ (1996) Enzymology and molecular biology of lignin degradation. In: Bramble R, Marzluf G (eds) The Mycota III. Springer-Verlag, Berlin, pp 297-314
16. T de la Rubia M Lucas J Martínez 2008 Controversial role of fungal laccases in decreasing the antibacterial effect of olive mill waste waters Bioresour Technol 99 1018 1025 10.1016/j.biortech.2007.03.002
17. AA Dias RM Bezerra AN Pereira 2004 Activity and elution profile of laccase during biological decolorization and dephenolization of olive mill wastewater Bioresour Technol 92 7 13 10.1016/j.biortech.2003.08.006
18. TM D'Souza K Boominathan CA Ready 1996 Isolation of laccase gene-specific sequences from white-rot fungi by PCR Appl Environ Microbiol 62 3739 3744
19. C Galhaup H Wagner B Hintertoisser D Haltrich 2002 Increased production of laccase by the wood-degrading basidiomycete Trametes pubescens Enzyme Microb Technol 30 529 536 10.1016/S0141-0229(01)00522-1
20. P Giardina R Cannio L Martirani L Marzullo G Palmieri G Sannia 1995 Cloning and sequencing of a laccase gene from the lignin-degrading basidiomycete Pleurotus ostreatus Appl Environ Microbiol 61 2408 2413
21. P Giardina V Aurilia R Cannio L Marzullo A Amoresano R Siciliano P Pucci G Sannia 1996 The gene, protein and glycan structures of laccase from Pleurotus ostreatus Eur J Biochem 235 508 515 10.1111/j.1432-1033.1996.00508.x
22. P Giardina G Palmieri A Scaloni B Fontanella V Faraco G Cennamo G Sannia 1999 Protein and gene structure of a blue laccase from Pleurotus ostreatus Biochem J 341 655 663 10.1042/0264-6021:3410655
23. P Giardina G Palmieri B Fontanella V Rivieccio G Sannia 2000 Manganese peroxidase isoenzymes produced by Pleurotus ostreatus grown on wood sawdust Arch Biochem Biophys 376 171 179 10.1006/abbi.1999.1691
24. P Giardina F Autore V Faraco G Festa G Palmieri A Piscitelli G Sannia 2007 Structural characterization of heterodimeric laccases from Pleurotus ostreatus Appl Microbiol Biotechnol 75 1293 1300 10.1007/s00253-007-0954-4
25. Gilland G, Perrin S, Brunn HF (1990) Competitive PCR for quantification of mRNA. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic, San Diego, pp 60-69
26. M Hamdi 1993 Future prospects and constraints of olive mill wastewaters use and treatment: a review Bioprocess Eng 8 209 214 10.1007/BF00369831
27. M Heinzkill L Bech T Halkier P Schneider T Anke 1998 Characterization of laccases and peroxidases from wood-rotting fungi (Family Coprinaceae) Appl Environ Microbiol 64 1601 1606
28. H Hoshida M Nakao H Kanazawa K Kubo T Hakuawaka K Morimasa R Akada Y Nishizawa 2001 Isolation of five laccase gene sequences from the white-rot fungus Trametes sanguinea by PCR, and cloning, characterization and expression of the laccase cDNA in yeasts J Biosci Bioeng 92 372 380 10.1263/jbb.92.372
29. H Hou J Zhou J Wang C Du B Yan 2004 Enhancement of laccase production by Pleurotus ostreatus and its use for the decolorization of anthraquinone dye Process Biochem 39 1415 1419 10.1016/S0032-9592(03)00267-X
30. T Irie Y Honda T Watanabe M Kuwahara 2000 Isolation of cDNA and genome fragments the major manganese peroxidase isozyme from the white rot basidiomycete Pleurotus ostreatus J Wood Sci 46 230 233 10.1007/BF00776454
31. 2+ is dispensable for the production of active MnP2 by Pleurotus ostreatus Bioch Biophys Res Com 327 871 876 10.1016/j.bbrc.2004.12.084
32. M Kissi M Mountadar O Assobhei E Gargiulo G Palmieri P Giardina G Sannia 2001 Roles of two white-rot basidiomycete fungi in decolorisation and detoxification of olive mill waste water Appl Microbiol Biotechnol 57 221 226 10.1007/s002530100712
33. MJ Martínez FJ Ruiz-Dueñas F Cullen AT Martínez 1996 Purification and catalytic properties of two manganese peroxidase isoenzymes from Pleurotus eryngii Eur J Biochem 237 424 432 10.1111/j.1432-1033.1996.0424k. x
34. D Martínez LF Larondo N Putman MD Gelpke K Huang J Chapman KG Helfenbein P Ramiya JC Detter F Laminer PM Coutinho B Henressat R Berka D Cullen D Rokhsar 2004 Genome sequence of the lignocelluloses degrading fungus Phanerochaete chrysosporium strain RP78 Nat Biotechnol 22 695 700 10.1038/nbt967
35. L Martirani P Giardina L Marzullo G Sannia 1996 Reduction of phenol content and toxicity in olive oil mill waste waters with the lignolytic fungus Pleurotus ostreatus Water Res 30 1914 1918 10.1016/0043-1354(95)00330-4
36. AJ Matos RM Bezerra AA Dias 2007 Screening of fungal isolates and properties of Ganoderma applanatum intended for olive mill wastewater decolorization and dephenolization Lett Appl Microbiol 45 270 275 10.1111/j.1472-765X.2007.02181.x
37. M Mebirouk L Sbai M Lopez J Gonzalez 2006 Olive oil mill wastewaters pollution abatement by physical treatments and biodegradation with Phanerochaete chrysosporium Environ Technol 27 1351 1356 10.1080/09593332708618749
38. TT Ngo HM Lenhoff 1980 A sensitive and versatile chromogenic assay for peroxidase and peroxidase-coupled reactions Anal Biochem 105 389 397 10.1016/0003-2697(80)90475-3
39. G Olivieri A Marzocchella P Salatino P Giardina G Cennamo G Sannia 2006 Olive mill wastewater remediation by means of Pleurotus ostreatus Biochem Eng J 31 180 187 10.1016/j.bej.2006.07.005
40. G Palmieri P Giardina L Marzullo B Desiderio G Nitti R Cannio G Sannia 1993 Stability and activity of a phenol oxidase from the ligninolytic fungus Pleurotus ostreatus Appl Microbiol Biotechnol 39 632 636 10.1007/BF00205066
41. G Palmieri P Giardina C Bianco A Scaloni A Capasso G Sannia 1997 A novel white laccase from Pleurotus ostreatus J Biol Chem 272 31301 31307 10.1074/jbc.272.50.31301
42. G Palmieri P Giardina C Bianco B Fontanella G Sannia 2000 Copper induction of laccase isoenzymes in the ligninolytic fungus Pleurotus ostreatus Appl Environ Microbiol 66 920 924 10.1128/AEM.66.3.920-924.2000
43. G Palmieri G Cennamo V Faraco A Amoresano G Sannia P Giardina 2003 A typical laccase isoenzymes from copper supplemented Pleurotus ostreatus cultures Enzyme Microb Tech 33 220 230 10.1016/S0141-0229(03)00117-0
44. JR Raper DH Boyd CA Raper 1965 Primary and secondary mutations at the incompatibility loci in Schizophyllum Proc Natl Acad Sci USA 53 1324 1332 10.1073/pnas.53.6.1324
45. M Reverberi F Di Mario U Tomati 2004 β-Glucan synthase induction in mushrooms grown on olive mill wastewaters Appl Microbiol Biotechnol 66 217 225 10.1007/s00253-004-1662-y
46. M Saavedra E Benitez C Cifuentes R Nogales 2006 Enzyme activities and chemical changes in wet olive cake after treatment with Pleurotus ostreatus or Eisenia fetida Biodegradation 17 93 102 10.1007/s10532-005-4216-9
47. Salame Omicron Yarden Hadar 2010 Pleurotus ostreatus manganese-dependent peroxidase silencing impairs decolourization of Orange II Microb Biotechnol 3 93 106 10.1111/j.1751-7915.2009.00154.x
48. S Sarkar AT Martínez MJ Martínez 1997 Biochemical and molecular characterization of a manganese peroxidase isoenzyme from Pleurotus ostreatus Bioch Biophys Acta 1339 23 30
49. S Sato F Liu H Koc M Tien 2007 Expression analysis of extracellular proteins from Phanerochaete chrysosporium grown on different liquid and solid substrates Microbiology 153 3023 3033 10.1099/mic.0.2006/000513-0
50. S Sayadi N Allouche M Jaoua F Aloui 2000 Detrimental effects of high molecular-mass polyphenols on olive mill waste water biotreatment Process Biochem 35 725 735 10.1016/S0032-9592(99)00134-X
51. DM Soden DW Dobson 2001 Differential regulation of laccase gene expression in Pleurotus sajor-caju Microbiology 147 1755 1763
52. M Sundaramoorthy K Kishi MH Gold TL Poulos 1997 Crystal structures of substrate binding site mutants of manganese peroxidase J Biol Chem 272 17574 17580 10.1074/jbc.272.28.17574 Erratum in: J Biol Chem (1997) 272: 26072
53. DJ Thiele 1992 Metal-regulated transcription in eukaryotes Nucleic Acids Res 20 1183 1191 10.1093/nar/20.6.1183
54. CF Thurston 1994 The structure and function of fungal laccases Microbiology 140 19 26 10.1099/13500872-140-1-19
55. A Tsioulpas D Dimou D Iconomou G Aggelis 2002 Phenolic removal in olive oil mill wastewater by strains of Pleurotus spp. in respect to their phenol oxidase (laccase) activity Bioresour Technol 84 251 257 10.1016/S0960-8524(02) 00043-3
56. MA Typas AM Griffen BW Bainbridge JB Heale 1992 Restriction fragment length polymorphisms in mitochondrial DNA and ribosomal RNA gene complex as an aid to the characterization of species and sub-species populations in the genus Verticillium FEMS Microbiol Lett 95 157 162 10.1111/j.1574-6968.1992.tb05359.x
57. U.S. DOE (2006) Breaking the biological barriers to cellulosic ethanol: A joint research agenta, DOE/SC-0095. US Department of Energy, Office of Science and Office of Energy efficiency and renewable energy. www.doegenomestolife.org/ biofuels/
58. A Vanden Wymelenberg P Minges G Sabat D Martínez A Aerts A Salamov I Grigoriev H Shapiro N Putnam P Belinky C Dosoretz J Gaskell P Kersten D Cullen 2006 Computational analysis of the Phanerochaete chrysosporium v2.0 genome database and mass spectrometry identification of peptides in ligninolytic cultures reveals complex mixtures of secreted proteins Fungal Genet Biol 43 343 356 10.1016/j.fgb.2006.01.003
59. Waterman PG, Mole S (1994) Analysis of phenolic plant metabolites. Blackwell Scientific Publications. Methods in Ecology, Oxford, Boston, USA
60. DW Wong 2009 Structure and action mechanism of ligninolytic enzymes Appl Biochem Biotechnol 157 174 209 10.1007/s12010-008-8279-z