메뉴 건너뛰기




Volumn 5, Issue 12, 2010, Pages 1983-1992

Disaccharide compositional analysis of heparan sulfate and heparin polysaccharides using UV or high-sensitivity fluorescence (BODIPY) detection

Author keywords

[No Author keywords available]

Indexed keywords

FLUOROPHORE HYDRAZIDE; HEPARAN SULFATE; HEPARIN POLYSACCHARIDE; HYDRAZIDE; POLYSACCHARIDE; UNCLASSIFIED DRUG;

EID: 77956156792     PISSN: 17542189     EISSN: 17502799     Source Type: Journal    
DOI: 10.1038/nprot.2010.145     Document Type: Article
Times cited : (45)

References (29)
  • 1
    • 28544444249 scopus 로고    scopus 로고
    • Glycomics: An integrated systems approach to structure-function relationships of glycans
    • Raman, R., Raguram, S., Venkataraman, G., Paulson, J. C. & Sasisekharan, R. Glycomics: an integrated systems approach to structure-function relationships of glycans. Nat. Methods 2, 817-824 (2005).
    • (2005) Nat. Methods , vol.2 , pp. 817-824
    • Raman, R.1    Raguram, S.2    Venkataraman, G.3    Paulson, J.C.4    Sasisekharan, R.5
  • 2
    • 33846385736 scopus 로고    scopus 로고
    • Emerging glycomics technologies
    • Turnbull, J. E. & Field, R. A. Emerging glycomics technologies. Nat. Chem. Biol. 3, 74-77 (2007).
    • (2007) Nat. Chem. Biol. , vol.3 , pp. 74-77
    • Turnbull, J.E.1    Field, R.A.2
  • 3
    • 34247610845 scopus 로고    scopus 로고
    • Heparan sulphate proteoglycans fine-tune mammalian physiology
    • Bishop, J. R., Schuksz, M. & Esko, J. D. Heparan sulphate proteoglycans fine-tune mammalian physiology. Nature 446, 1030-1037 (2007).
    • (2007) Nature , vol.446 , pp. 1030-1037
    • Bishop, J.R.1    Schuksz, M.2    Esko, J.D.3
  • 4
    • 0035253193 scopus 로고    scopus 로고
    • Heparan sulfate: Decoding a dynamic multifunctional cell regulator
    • Turnbull, J., Powell, A. & Guimond, S. Heparan sulfate: decoding a dynamic multifunctional cell regulator. Trends Cell Biol. 11, 75-82 (2001).
    • (2001) Trends Cell. Biol. , vol.11 , pp. 75-82
    • Turnbull, J.1    Powell, A.2    Guimond, S.3
  • 5
    • 0035984272 scopus 로고    scopus 로고
    • Heparin and heparan sulfate: Structure and function
    • Rabenstein, D. L. Heparin and heparan sulfate: structure and function. Nat. Prod. Rep. 19, 312-331 (2002).
    • (2002) Nat. Prod. Rep. , vol.19 , pp. 312-331
    • Rabenstein, D.L.1
  • 7
    • 0026016084 scopus 로고
    • Distribution of iduronate 2-sulphate residues in heparan sulphate. Evidence for an ordered polymeric structure
    • Turnbull, J. E. & Gallagher, J. T. Distribution of iduronate 2-sulphate residues in heparan sulphate. Evidence for an ordered polymeric structure. Biochem. J. 273 (Part 3), 553-559 (1991).
    • (1991) Biochem. J. , vol.273 , Issue.3 PART , pp. 553-559
    • Turnbull, J.E.1    Gallagher, J.T.2
  • 8
    • 0142059961 scopus 로고    scopus 로고
    • Heparan sulfate regulates amyloid precursor protein processing by BACE1, the Alzheimer's beta-secretase
    • Scholefield, Z. et al. Heparan sulfate regulates amyloid precursor protein processing by BACE1, the Alzheimer's beta-secretase. J. Cell Biol. 163, 97-107 (2003).
    • (2003) J. Cell. Biol. , vol.163 , pp. 97-107
    • Scholefield, Z.1
  • 9
    • 41649094162 scopus 로고    scopus 로고
    • Disruption of rosetting in Plasmodium falciparum malaria with chemically modified heparin and low molecular weight derivatives possessing reduced anticoagulant and other serine protease inhibition activities
    • Skidmore, M. A. et al. Disruption of rosetting in Plasmodium falciparum malaria with chemically modified heparin and low molecular weight derivatives possessing reduced anticoagulant and other serine protease inhibition activities. J. Med. Chem. 51, 1453-1458 (2008).
    • (2008) J. Med. Chem. , vol.51 , pp. 1453-1458
    • Skidmore, M.A.1
  • 10
    • 0037443518 scopus 로고    scopus 로고
    • Heparan sulfate on endothelial cells mediates the binding of Plasmodium falciparum-infected erythrocytes via the DBL1alpha domain of PfEMP1
    • Vogt, A. M. et al. Heparan sulfate on endothelial cells mediates the binding of Plasmodium falciparum-infected erythrocytes via the DBL1alpha domain of PfEMP1. Blood 101, 2405-2411 (2003).
    • (2003) Blood , vol.101 , pp. 2405-2411
    • Vogt, A.M.1
  • 11
    • 0036463453 scopus 로고    scopus 로고
    • Novel drug development opportunities for heparin
    • Lever, R. & Page, C. P. Novel drug development opportunities for heparin. Nat. Rev. Drug Discov. 1, 140-148 (2002).
    • (2002) Nat. Rev. Drug Discov. , vol.1 , pp. 140-148
    • Lever, R.1    Page, C.P.2
  • 12
    • 6344226660 scopus 로고    scopus 로고
    • Proteoglycans make the grade-ient
    • Guimond, S. & Turnbull, J. E. Proteoglycans make the grade-ient. Mol. Cell 16, 159-160 (2004).
    • (2004) Mol. Cell. , vol.16 , pp. 159-160
    • Guimond, S.1    Turnbull, J.E.2
  • 13
    • 2442549670 scopus 로고    scopus 로고
    • Interactions of heparin/heparan sulfate with proteins: Appraisal of structural factors and experimental approaches
    • Powell, A. K., Yates, E. A., Fernig, D. G. & Turnbull, J. E. Interactions of heparin/heparan sulfate with proteins: appraisal of structural factors and experimental approaches. Glycobiology 14, 17R-30R (2004).
    • (2004) Glycobiology , vol.14
    • Powell, A.K.1    Yates, E.A.2    Fernig, D.G.3    Turnbull, J.E.4
  • 14
    • 0033581924 scopus 로고    scopus 로고
    • Fibroblast growth factor receptor signalling is dictated by specific heparan sulphate saccharides
    • Guimond, S. E. & Turnbull, J. E. Fibroblast growth factor receptor signalling is dictated by specific heparan sulphate saccharides. Curr. Biol. 9, 1343-1346 (1999).
    • (1999) Curr. Biol. , vol.9 , pp. 1343-1346
    • Guimond, S.E.1    Turnbull, J.E.2
  • 15
    • 0036869512 scopus 로고    scopus 로고
    • Variant heparan sulfates synthesized in developing mouse brain differentially regulate FGF signaling
    • Ford-Perriss, M. et al. Variant heparan sulfates synthesized in developing mouse brain differentially regulate FGF signaling. Glycobiology 12, 721-727 (2002).
    • (2002) Glycobiology , vol.12 , pp. 721-727
    • Ford-Perriss, M.1
  • 16
    • 77950795510 scopus 로고    scopus 로고
    • Generating heparan sulfate saccharide libraries for glycomics applications
    • Powell, A. K., Ahmed, Y. A., Yates, E. A. & Turnbull, J. E. Generating heparan sulfate saccharide libraries for glycomics applications. Nat. Protoc. 5, 821-833 (2010).
    • (2010) Nat. Protoc. , vol.5 , pp. 821-833
    • Powell, A.K.1    Ahmed, Y.A.2    Yates, E.A.3    Turnbull, J.E.4
  • 17
    • 77952149942 scopus 로고    scopus 로고
    • High-performance liquid chromatography-mass spectrometry for mapping and sequencing glycosaminoglycan-derived oligosaccharides
    • Volpi, N. & Linhardt, R. J. High-performance liquid chromatography-mass spectrometry for mapping and sequencing glycosaminoglycan- derived oligosaccharides. Nat. Protoc. 5, 993-1004 (2010).
    • (2010) Nat. Protoc. , vol.5 , pp. 993-1004
    • Volpi, N.1    Linhardt, R.J.2
  • 18
    • 70350038006 scopus 로고    scopus 로고
    • Rapid purification and high sensitivity analysis of heparan sulfate from cells and tissues: Toward glycomics profiling
    • Guimond, S. E. et al. Rapid purification and high sensitivity analysis of heparan sulfate from cells and tissues: toward glycomics profiling. J. Biol. Chem. 284, 25714-25722 (2009).
    • (2009) J. Biol. Chem. , vol.284 , pp. 25714-25722
    • Guimond, S.E.1
  • 19
    • 0025321597 scopus 로고
    • Examination of the substrate-specificity of heparin and heparan-sulfate lyases
    • Linhardt, R. J., Turnbull, J. E., Wang, H. M., Loganathan, D. & Gallagher, J. T. Examination of the substrate-specificity of heparin and heparan-sulfate lyases. Biochemistry 29, 2611-2617 (1990).
    • (1990) Biochemistry , vol.29 , pp. 2611-2617
    • Linhardt, R.J.1    Turnbull, J.E.2    Wang, H.M.3    Loganathan, D.4    Gallagher, J.T.5
  • 20
    • 0032981696 scopus 로고    scopus 로고
    • A strategy for rapid sequencing of heparan sulfate and heparin saccharides
    • Turnbull, J. E., Hopwood, J. J. & Gallagher, J. T. A strategy for rapid sequencing of heparan sulfate and heparin saccharides. Proc. Natl. Acad. Sci. USA 96, 2698-2703 (1999).
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 2698-2703
    • Turnbull, J.E.1    Hopwood, J.J.2    Gallagher, J.T.3
  • 21
    • 44449128911 scopus 로고    scopus 로고
    • A simplified and sensitive fluorescent method for disaccharide analysis of both heparan sulfate and chondroitin/dermatan sulfates from biological samples
    • Deakin, J. A. & Lyon, M. A simplified and sensitive fluorescent method for disaccharide analysis of both heparan sulfate and chondroitin/dermatan sulfates from biological samples. Glycobiology 18, 483-491 (2008).
    • (2008) Glycobiology , vol.18 , pp. 483-491
    • Deakin, J.A.1    Lyon, M.2
  • 22
    • 0035261641 scopus 로고    scopus 로고
    • Electrophoretic sequencing of heparin/heparan sulfate oligosaccharides using a highly sensitive fluorescent end label
    • Drummond, K. J., Yates, E. A. & Turnbull, J. E. Electrophoretic sequencing of heparin/heparan sulfate oligosaccharides using a highly sensitive fluorescent end label. Proteomics 1, 304-310 (2001).
    • (2001) Proteomics , vol.1 , pp. 304-310
    • Drummond, K.J.1    Yates, E.A.2    Turnbull, J.E.3
  • 24
    • 0030571017 scopus 로고    scopus 로고
    • Simultaneous determination of dermatan sulfate and oversulfated dermatan sulfate in plasma by high-performance liquid chromatography with postcolumn fluorescence derivatization
    • Huang, Y. et al. Simultaneous determination of dermatan sulfate and oversulfated dermatan sulfate in plasma by high-performance liquid chromatography with postcolumn fluorescence derivatization. Anal. Biochem. 240, 227-234 (1996).
    • (1996) Anal. Biochem. , vol.240 , pp. 227-234
    • Huang, Y.1
  • 25
    • 33750303849 scopus 로고    scopus 로고
    • High sensitivity separation and detection of heparan sulfate disaccharides
    • Skidmore, M. A. et al. High sensitivity separation and detection of heparan sulfate disaccharides. J. Chromatogr. A 1135, 52-56 (2006).
    • (2006) J. Chromatogr. A , vol.1135 , pp. 52-56
    • Skidmore, M.A.1
  • 26
    • 0032898874 scopus 로고    scopus 로고
    • Rapid and sensitive analysis of disaccharide composition in heparin and heparan sulfate by reversed-phase ion-pair chromatography on a 2 μm porous silica gel column
    • Toyoda, H., Yamamoto, H., Ogino, N., Toida, T. & Imanari, T. Rapid and sensitive analysis of disaccharide composition in heparin and heparan sulfate by reversed-phase ion-pair chromatography on a 2 μm porous silica gel column. J. Chromatogr. A 830, 197-201 (1999).
    • (1999) J. Chromatogr. A , vol.830 , pp. 197-201
    • Toyoda, H.1    Yamamoto, H.2    Ogino, N.3    Toida, T.4    Imanari, T.5
  • 27
    • 0344848565 scopus 로고    scopus 로고
    • Microanalysis of glycosaminoglycan-derived oligosaccharides labeled with a fluorophore 2-aminobenzamide by highperformance liquid chromatography: Application to disaccharide composition analysis and exosequencing of oligosaccharides
    • Kinoshita, A. & Sugahara, K. Microanalysis of glycosaminoglycan- derived oligosaccharides labeled with a fluorophore 2-aminobenzamide by highperformance liquid chromatography: application to disaccharide composition analysis and exosequencing of oligosaccharides. Anal. Biochem. 269, 367-378 (1999).
    • (1999) Anal. Biochem. , vol.269 , pp. 367-378
    • Kinoshita, A.1    Sugahara, K.2
  • 28
    • 46449129011 scopus 로고    scopus 로고
    • Quantitative determination of the glycosaminoglycan Delta-disaccharide composition of serum, platelets and granulocytes by reversed-phase high-performance liquid chromatography
    • Ambrosius, M., Kleesiek, K. & Gotting, C. Quantitative determination of the glycosaminoglycan Delta-disaccharide composition of serum, platelets and granulocytes by reversed-phase high-performance liquid chromatography. J. Chromatogr. A 1201, 54-60 (2008).
    • (2008) J. Chromatogr. A , vol.1201 , pp. 54-60
    • Ambrosius, M.1    Kleesiek, K.2    Gotting, C.3
  • 29
    • 66149147074 scopus 로고    scopus 로고
    • Labelling heparan sulphate saccharides with chromophore, fluorescence and mass tags for HPLC and MS separations
    • Skidmore, M. A., Atrih, A. & Yates, E. A. Labelling heparan sulphate saccharides with chromophore, fluorescence and mass tags for HPLC and MS separations. Methods Mol. Biol. 534, 157-169 (2009).
    • (2009) Methods Mol. Biol. , vol.534 , pp. 157-169
    • Skidmore, M.A.1    Atrih, A.2    Yates, E.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.