-
3
-
-
67650319009
-
Single-molecule approaches to stochastic gene expression
-
A. Raj and A. van Oudenaarden, "Single-molecule approaches to stochastic gene expression," Annu. Rev. Biophys., vol. 38, pp. 255-270, 2009.
-
(2009)
Annu. Rev. Biophys.
, vol.38
, pp. 255-270
-
-
Raj, A.1
Van Oudenaarden, A.2
-
4
-
-
0037119587
-
Stochastic gene expression in a single cell
-
M. B. Elowitz, A. J. Levine, E. D. Siggia, and P. S. Swain, "Stochastic gene expression in a single cell," Science, vol. 297, pp. 1183-1186, 2002.
-
(2002)
Science
, vol.297
, pp. 1183-1186
-
-
Elowitz, M.B.1
Levine, A.J.2
Siggia, E.D.3
Swain, P.S.4
-
5
-
-
0001601301
-
Stochastic approach to chemical kinetics
-
D. A. McQuarrie, "Stochastic approach to chemical kinetics," J. Appl. Probab., vol. 4, no. 3, pp. 413-478, 1967.
-
(1967)
J. Appl. Probab.
, vol.4
, Issue.3
, pp. 413-478
-
-
McQuarrie, D.A.1
-
6
-
-
44049109914
-
A rigorous derivation of the chemical master equation
-
D. T. Gillespie, "A rigorous derivation of the chemical master equation," Physica A, vol. 188, pp. 404-425, 1992.
-
(1992)
Physica A
, vol.188
, pp. 404-425
-
-
Gillespie, D.T.1
-
7
-
-
0035815743
-
The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media
-
A. P. Minton, "The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media," J. Biol. Chem., vol. 276, pp. 10577-10580, 2001.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 10577-10580
-
-
Minton, A.P.1
-
8
-
-
33748520215
-
Stochastic simulation of chemical reactions with spatial resolution and single molecule detail
-
S. S. Andrews and D. Bray, "Stochastic simulation of chemical reactions with spatial resolution and single molecule detail," Phys. Biol., vol. 1, pp. 137-151, 2004.
-
(2004)
Phys. Biol.
, vol.1
, pp. 137-151
-
-
Andrews, S.S.1
Bray, D.2
-
9
-
-
41549140160
-
Bayesian inference for a discretely observed stochastic kinetic model
-
R. J. Boys, D. J. Wilkinson, and T. B. L. Kirkwood, "Bayesian inference for a discretely observed stochastic kinetic model," Stat. Comput., vol. 18, no. 2, pp. 125-135, 2008.
-
(2008)
Stat. Comput.
, vol.18
, Issue.2
, pp. 125-135
-
-
Boys, R.J.1
Wilkinson, D.J.2
Kirkwood, T.B.L.3
-
10
-
-
77955997096
-
Bayesian inference for nonlinear multivariate diffusion models observed with error
-
A. Golightly and D. J. Wilkinson, "Bayesian inference for nonlinear multivariate diffusion models observed with error," Comput. Stat. Data An., vol. 83, pp. 1891-1901, 2008.
-
(2008)
Comput. Stat. Data An.
, vol.83
, pp. 1891-1901
-
-
Golightly, A.1
Wilkinson, D.J.2
-
11
-
-
77956003271
-
Approximate inference for stochastic reaction processes
-
The MIT Press
-
A. Ruttor, G. Sanguinetti, and M. Opper, "Approximate inference for stochastic reaction processes," in Learning and Inference in Computational Systems Biology, pp. 189-205. The MIT Press, 2009.
-
(2009)
Learning and Inference in Computational Systems Biology
, pp. 189-205
-
-
Ruttor, A.1
Sanguinetti, G.2
Opper, M.3
-
12
-
-
58149142997
-
Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems
-
T. Toni, D. Welch, N. Strelkowa, A. Ipsen, and M. P. H. Stumpf, "Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems," J. Roy. Soc. Interface, vol. 6, no. 31, pp. 187-2022, 2009.
-
(2009)
J. Roy. Soc. Interface
, vol.6
, Issue.31
, pp. 187-2022
-
-
Toni, T.1
Welch, D.2
Strelkowa, N.3
Ipsen, A.4
Stumpf, M.P.H.5
-
13
-
-
52649165686
-
Model reduction of stochastic processes using Wasserstein pseudometrics
-
D. Thorsley and E. Klavins, "Model reduction of stochastic processes using Wasserstein pseudometrics," in Amer Contr Conf, June 11-13 2008, pp. 1374-1381.
-
Amer Contr Conf, June 11-13 2008
, pp. 1374-1381
-
-
Thorsley, D.1
Klavins, E.2
-
14
-
-
54249124501
-
Learning biological networks: From modules to dynamics
-
R. Bonneau, "Learning biological networks: from modules to dynamics," Nat. Chem. Biol., vol. 4, no. 11, pp. 658-664, 2008.
-
(2008)
Nat. Chem. Biol.
, vol.4
, Issue.11
, pp. 658-664
-
-
Bonneau, R.1
-
15
-
-
26844581913
-
Delay-induced stochastic oscillations in gene regulation
-
D. Bratsun, D. Volfson, L. S. Tsimring, and J. Hasty, "Delay-induced stochastic oscillations in gene regulation," P. Natl. Acad. Sci. USA, vol. 102, no. 41, pp. 14593-14598, 2005.
-
(2005)
P. Natl. Acad. Sci. USA
, vol.102
, Issue.41
, pp. 14593-14598
-
-
Bratsun, D.1
Volfson, D.2
Tsimring, L.S.3
Hasty, J.4
-
17
-
-
0011024988
-
The Frechet distance between multivariate normal distributions
-
D. C. Dowson and B. V. Landau, "The Frechet distance between multivariate normal distributions," J. Multivariate Anal., vol. 12, pp. 450-455, 1982.
-
(1982)
J. Multivariate Anal.
, vol.12
, pp. 450-455
-
-
Dowson, D.C.1
Landau, B.V.2
-
18
-
-
0010424768
-
A mechanism for memory storage insensitive to molecular turnover: A bistable autophosphorylating kinase
-
J. E. Lisman, "A mechanism for memory storage insensitive to molecular turnover: A bistable autophosphorylating kinase," P. Natl. Acad. Sci. USA, vol. 82, pp. 3055-3057, 1985.
-
(1985)
P. Natl. Acad. Sci. USA
, vol.82
, pp. 3055-3057
-
-
Lisman, J.E.1
-
20
-
-
35748951912
-
Yeast osmoregulation
-
S. Hohmann, M. Krantz, and B. Nordlander, "Yeast osmoregulation," Methods Enzymol., vol. 428, pp. 29-45, 2007.
-
(2007)
Methods Enzymol.
, vol.428
, pp. 29-45
-
-
Hohmann, S.1
Krantz, M.2
Nordlander, B.3
-
21
-
-
77955994133
-
-
S. Pelet, F. Rudolf, and M. Peter, "manuscript in preparation,"
-
S. Pelet, F. Rudolf, and M. Peter, "manuscript in preparation,".
-
-
-
-
22
-
-
60549106999
-
Recruitment of a chromatin remodelling complex by the Hog1 MAP kinase to stress genes
-
G. Mas et al., "Recruitment of a chromatin remodelling complex by the Hog1 MAP kinase to stress genes," EMBO J., vol. 28, pp. 326-336, 2009.
-
(2009)
EMBO J.
, vol.28
, pp. 326-336
-
-
Mas, G.1
-
24
-
-
33644897539
-
Ubiquity of log-normal distributions in intra-cellular reaction dynamics
-
C. Furusawa, T. Suzuki, A. Kashiwagi, T. Yomo, and K. Kaneko, "Ubiquity of log-normal distributions in intra-cellular reaction dynamics," Biophys., vol. 1, pp. 25-31, 2005.
-
(2005)
Biophys.
, vol.1
, pp. 25-31
-
-
Furusawa, C.1
Suzuki, T.2
Kashiwagi, A.3
Yomo, T.4
Kaneko, K.5
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