메뉴 건너뛰기




Volumn 17, Issue 3, 2010, Pages 139-153

In silico analysis reveals 75 members of Mitogen-Activated protein Kinase Kinase Kinase gene family in rice

Author keywords

gene family; MAPK cascade; MAPKKK; rice

Indexed keywords

COMPLEMENTARY DNA; MITOGEN ACTIVATED PROTEIN KINASE; RAF PROTEIN; UNCLASSIFIED DRUG; VEGETABLE PROTEIN; ZIK PROTEIN;

EID: 77955942478     PISSN: 13402838     EISSN: 17561663     Source Type: Journal    
DOI: 10.1093/dnares/dsq011     Document Type: Article
Times cited : (183)

References (40)
  • 1
    • 0034874729 scopus 로고    scopus 로고
    • Plant mitogen-activated protein kinase signaling cascades
    • Tena, G., Asai, T., Chiu, W.L. and Sheen, J. 2001, Plant mitogen-activated protein kinase signaling cascades, Curr. Opin. Plant Biol., 4, 392-401.
    • (2001) Curr. Opin. Plant Biol. , vol.4 , pp. 392-401
    • Tena, G.1    Asai, T.2    Chiu, W.L.3    Sheen, J.4
  • 2
    • 33746275960 scopus 로고    scopus 로고
    • Signaling through MAP kinase networks in plants
    • Mishra, N.S., Tuteja, R. and Tuteja, N. 2006, Signaling through MAP kinase networks in plants, Arch. Biochem. Biophys., 452, 55-68.
    • (2006) Arch. Biochem. Biophys. , vol.452 , pp. 55-68
    • Mishra, N.S.1    Tuteja, R.2    Tuteja, N.3
  • 3
    • 0032545402 scopus 로고    scopus 로고
    • Isolation of ATMEKK1 (a MAP kinase kinase kinase) interacting proteins and analysis of a MAP kinase cascade in Arabidopsis
    • Ichimura, K., Mizoguchi, T., Irie, K., et al. 1998, Isolation of ATMEKK1 (a MAP kinase kinase kinase) interacting proteins and analysis of a MAP kinase cascade in Arabidopsis, Biochem. Biophys. Res. Commun., 253, 532-543
    • (1998) Biochem. Biophys. Res. Commun. , vol.253 , pp. 532-543
    • Ichimura, K.1    Mizoguchi, T.2    Irie, K.3
  • 4
    • 0001570774 scopus 로고    scopus 로고
    • Progress in studies of plant homologs of mitogen-activated protein (MAP) kinase and potential upstream components in kinase cascades
    • Machida, Y., Nishihama, R. and Kitakura, S. 1997, Progress in studies of plant homologs of mitogen-activated protein (MAP) kinase and potential upstream components in kinase cascades, Crit. Rev. Plant Sci., 16, 481-496
    • (1997) Crit. Rev. Plant Sci. , vol.16 , pp. 481-496
    • MacHida, Y.1    Nishihama, R.2    Kitakura, S.3
  • 5
    • 0038714319 scopus 로고    scopus 로고
    • Mitogen-activated protein kinase cascades in plants: A new nomenclature
    • MAPK Group
    • MAPK Group 2002, Mitogen-activated protein kinase cascades in plants: a new nomenclature, Trends Plant Sci., 7, 301-308
    • (2002) Trends Plant Sci. , vol.7 , pp. 301-308
  • 6
    • 0036779407 scopus 로고    scopus 로고
    • Complexity, cross talk and integration of plant MAP kinase signaling
    • Jonak, C., Okresz, L., Bogre, L. and Hirt, H. 2002, Complexity, cross talk and integration of plant MAP kinase signaling, Curr. Opin. Plant Biol., 5, 415-424
    • (2002) Curr. Opin. Plant Biol. , vol.5 , pp. 415-424
    • Jonak, C.1    Okresz, L.2    Bogre, L.3    Hirt, H.4
  • 7
    • 33646345095 scopus 로고    scopus 로고
    • Molecular Analysis of the Rice MAP Kinase Gene family in relation to Magnaporthe grisea infection
    • Reyna, N.S. and Yang, Y. 2006, Molecular Analysis of the Rice MAP Kinase Gene family in relation to Magnaporthe grisea infection, Mol. Plant Microbe Interact., 19, 530-540
    • (2006) Mol. Plant Microbe Interact. , vol.19 , pp. 530-540
    • Reyna, N.S.1    Yang, Y.2
  • 8
    • 33646476164 scopus 로고    scopus 로고
    • Ancient signals: Comparative genomics of plant MAPK and MAPKK gene families
    • Hamel, L.P., Nicole, M.C., Sritubtim, S., et al. 2006, Ancient signals: comparative genomics of plant MAPK and MAPKK gene families, Trends Plant Sci., 11, 192-198
    • (2006) Trends Plant Sci. , vol.11 , pp. 192-198
    • Hamel, L.P.1    Nicole, M.C.2    Sritubtim, S.3
  • 9
    • 0032538398 scopus 로고    scopus 로고
    • Identification of a possible MAP kinase cascade in Arabidopsis thaliana based on pairwise yeast two hybrid analysis and functional complementation tests of yeast mutants
    • Mizoguchi, T., Ichimura, K., Irie, K., et al. 1998, Identification of a possible MAP kinase cascade in Arabidopsis thaliana based on pairwise yeast two hybrid analysis and functional complementation tests of yeast mutants, FEBS Lett., 437, 56-60.
    • (1998) FEBS Lett. , vol.437 , pp. 56-60
    • Mizoguchi, T.1    Ichimura, K.2    Irie, K.3
  • 10
    • 42149096493 scopus 로고    scopus 로고
    • The genetic locus At1g73660 encodes a putative MAPKKK and negatively regulates salt tolerance in Arabidopsis
    • Gao, L. and Xiang, C.B. 2008, The genetic locus At1g73660 encodes a putative MAPKKK and negatively regulates salt tolerance in Arabidopsis, Plant Mol. Biol., 67, 125-134
    • (2008) Plant Mol. Biol. , vol.67 , pp. 125-134
    • Gao, L.1    Xiang, C.B.2
  • 11
    • 0036016411 scopus 로고    scopus 로고
    • An Arabidopsis mitogen-activated protein kinase kinase kinase gene family encodes essential positive regulators of cytokinesis
    • Krysan, P.J., Jester, P.J., Gottwald, J.R. and Sussman, M.R. 2002, An Arabidopsis mitogen-activated protein kinase kinase kinase gene family encodes essential positive regulators of cytokinesis, Plant Cell, 14, 1109-1120
    • (2002) Plant Cell , vol.14 , pp. 1109-1120
    • Krysan, P.J.1    Jester, P.J.2    Gottwald, J.R.3    Sussman, M.R.4
  • 12
    • 0035252590 scopus 로고    scopus 로고
    • The NPK1 mitogen-activated protein kinase kinase kinase is a regulator of cell-plate formation in plant cytokinesis
    • Nishihama, R., Ishikawa, M., Araki, S., Soyano, T., Asada, T. and Machida, Y. 2001, The NPK1 mitogen-activated protein kinase kinase kinase is a regulator of cell-plate formation in plant cytokinesis, Genes Dev., 15, 352-363
    • (2001) Genes Dev. , vol.15 , pp. 352-363
    • Nishihama, R.1    Ishikawa, M.2    Araki, S.3    Soyano, T.4    Asada, T.5    MacHida, Y.6
  • 13
    • 0027478967 scopus 로고
    • CTR1, a negative regulator of the ethylene response pathway in Arabidopsis, encodes a member of the raf family of protein kinases
    • Kieber, J.J., Rothenberg, M., Roman, G., Feldmann, K.A. and Ecker, J.R. 1993, CTR1, a negative regulator of the ethylene response pathway in Arabidopsis, encodes a member of the raf family of protein kinases, Cell, 72, 427-441
    • (1993) Cell , vol.72 , pp. 427-441
    • Kieber, J.J.1    Rothenberg, M.2    Roman, G.3    Feldmann, K.A.4    Ecker, J.R.5
  • 14
    • 0037186599 scopus 로고    scopus 로고
    • MAP kinase signalling cascade in Arabidopsis innate immunity
    • Asai, T., Tena, G., Plotnikova, J., et al. 2002, MAP kinase signalling cascade in Arabidopsis innate immunity, Nature, 415, 977-983
    • (2002) Nature , vol.415 , pp. 977-983
    • Asai, T.1    Tena, G.2    Plotnikova, J.3
  • 15
    • 4143088379 scopus 로고    scopus 로고
    • MAPKKKalpha is a positive regulator of cell death associated with both plant immunity and disease
    • del Pozo, O., Pedley, K.F. and Martin, G.B. 2004, MAPKKKalpha is a positive regulator of cell death associated with both plant immunity and disease, EMBO J., 23, 3072-3082
    • (2004) EMBO J. , vol.23 , pp. 3072-3082
    • Del Pozo, O.1    Pedley, K.F.2    Martin, G.B.3
  • 16
    • 34247254409 scopus 로고    scopus 로고
    • MEKK1 is required for flg22-induced MPK4 activation in Arabidopsis plants
    • Suarez-Rodriguez, M.C., Adams-Phillips, L., Liu, Y., et al. 2007, MEKK1 is required for flg22-induced MPK4 activation in Arabidopsis plants, Plant Physiol., 143, 661-669
    • (2007) Plant Physiol. , vol.143 , pp. 661-669
    • Suarez-Rodriguez, M.C.1    Adams-Phillips, L.2    Liu, Y.3
  • 17
    • 0035793044 scopus 로고    scopus 로고
    • Negative regulation of defense responses in plants by a conserved MAPKK kinase
    • Frye, C.A., Tang, D. and Innes, R.W. 2001, Negative regulation of defense responses in plants by a conserved MAPKK kinase, Proc. Natl. Acad. Sci. USA, 98, 373-378
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 373-378
    • Frye, C.A.1    Tang, D.2    Innes, R.W.3
  • 18
    • 84907150192 scopus 로고    scopus 로고
    • The map-based sequence of the rice genome
    • International Rice Genome Sequencing Project
    • International Rice Genome Sequencing Project 2005, The map-based sequence of the rice genome, Nature, 436, 793-800.
    • (2005) Nature , vol.436 , pp. 793-800
  • 19
    • 40549106515 scopus 로고    scopus 로고
    • Methods for Analysis of Gene Expression in Plants Using MPSS
    • Nobuta, K., Vemaraju, K. and Meyers, B.C. 2007, Methods for Analysis of Gene Expression in Plants Using MPSS, Methods Mol. Biol., 406, 387-407.
    • (2007) Methods Mol. Biol. , vol.406 , pp. 387-407
    • Nobuta, K.1    Vemaraju, K.2    Meyers, B.C.3
  • 20
    • 0034763215 scopus 로고    scopus 로고
    • Plant MAP kinase pathways: How many and what for
    • Wrzaczek, M. and Hirt, H. 2001, Plant MAP kinase pathways: how many and what for, Biol. Cell, 93, 81-87
    • (2001) Biol. Cell , vol.93 , pp. 81-87
    • Wrzaczek, M.1    Hirt, H.2
  • 21
    • 0028144180 scopus 로고
    • Genetics of signal trans-ductionininvertebrates
    • Dickson, B. and Hafen, E. 1994, Genetics of signal trans- ductionininvertebrates,Curr.Opin.Genet.Dev.,4,64-70.
    • (1994) Curr.Opin.Genet.Dev. , vol.4 , pp. 64-70
    • Dickson, B.1    Hafen, E.2
  • 22
    • 0037080956 scopus 로고    scopus 로고
    • Regulation of Raf-1 activation and signalling by depho-sphorylation
    • Dhillon, A.S., Meikle, S., Peyssonnaux, C., et al. 2002, Regulation of Raf-1 activation and signalling by depho-sphorylation, EMBO J., l21, 64-71.
    • (2002) EMBO J. , vol.121 , pp. 64-71
    • Dhillon, A.S.1    Meikle, S.2    Peyssonnaux, C.3
  • 23
    • 0032474838 scopus 로고    scopus 로고
    • A dimeric 14-3-3 protein is an essential cofactor for Raf kinase activity
    • Tzivion, G., Luo, Z. and Avruch, J. 1998, A dimeric 14-3-3 protein is an essential cofactor for Raf kinase activity, Nature, 394, 88-92.
    • (1998) Nature , vol.394 , pp. 88-92
    • Tzivion, G.1    Luo, Z.2    Avruch, J.3
  • 24
    • 0031041171 scopus 로고    scopus 로고
    • Differential regulation of Raf-1, A-Raf and B-Raf by oncogenic Ras and tyrosine kinases
    • Marais, R., Light, Y., Paterson, H.F., Mason, C.S. and Marshall, C.J. 1997, Differential regulation of Raf-1, A-Raf and B-Raf by oncogenic Ras and tyrosine kinases, J. Biol. Chem., 272, 4378-4383
    • (1997) J. Biol. Chem. , vol.272 , pp. 4378-4383
    • Marais, R.1    Light, Y.2    Paterson, H.F.3    Mason, C.S.4    Marshall, C.J.5
  • 25
    • 0032544525 scopus 로고    scopus 로고
    • Modulation of kinase activity and oncogenic properties by alternative splicing reveals a novel regulatory mechanism for B-Raf
    • Papin, C., Denouel-Galy, A., Laugier, D., Georges, C. and Eychène, A. 1998, Modulation of kinase activity and oncogenic properties by alternative splicing reveals a novel regulatory mechanism for B-Raf, J. Biol. Chem., 273, 24939-24947
    • (1998) J. Biol. Chem. , vol.273 , pp. 24939-24947
    • Papin, C.1    Denouel-Galy, A.2    Laugier, D.3    Georges, C.4    Eychène, A.5
  • 26
    • 0032101455 scopus 로고    scopus 로고
    • An Arabidopsis mutant with enhanced resistance to powdery mildew
    • Frye, C.A. and Innes, R.W. 1998, An Arabidopsis mutant with enhanced resistance to powdery mildew, Plant Cell, 10, 947-956
    • (1998) Plant Cell , vol.10 , pp. 947-956
    • Frye, C.A.1    Innes, R.W.2
  • 27
    • 0032574778 scopus 로고    scopus 로고
    • Association of the Arabidopsis CTR1 Raf like kinase with the ETR1 and ERS ethylene receptors
    • Clark, K.L., Larsen, P.B., Wang, X. and Chang, C. 1998, Association of the Arabidopsis CTR1 Raf like kinase with the ETR1 and ERS ethylene receptors, Proc. Natl. Acad. Sci. USA, 95, 5401-5406
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 5401-5406
    • Clark, K.L.1    Larsen, P.B.2    Wang, X.3    Chang, C.4
  • 28
    • 0035983345 scopus 로고    scopus 로고
    • The APRR3 component of the clock associated APRR1/TOC1 quintet is phosphorylated by a novel protein kinase belonging to the WNK family, the gene for which is also transcribed rhythmically in Arabidopsis thaliana
    • Murakami-Kojima, M., Nakamichi, N., Yamashino, T. and Mizuno, T. 2002, The APRR3 component of the clock associated APRR1/TOC1 quintet is phosphorylated by a novel protein kinase belonging to the WNK family, the gene for which is also transcribed rhythmically in Arabidopsis thaliana, Plant Cell Physiol., 43, 675-683
    • (2002) Plant Cell Physiol. , vol.43 , pp. 675-683
    • Murakami-Kojima, M.1    Nakamichi, N.2    Yamashino, T.3    Mizuno, T.4
  • 29
    • 0037446979 scopus 로고    scopus 로고
    • NQK1/NtMEK1 is a MAPKK that acts in the NPK1 MAPKKK-mediated MAPK cascade and is required for plant cytokinesis
    • Soyano, T., Nishihama, R., Morikiyo, K., Ishikawa, M. and Machida, Y. 2003, NQK1/NtMEK1 is a MAPKK that acts in the NPK1 MAPKKK-mediated MAPK cascade and is required for plant cytokinesis, Genes Dev., 17, 1055-1067
    • (2003) Genes Dev. , vol.17 , pp. 1055-1067
    • Soyano, T.1    Nishihama, R.2    Morikiyo, K.3    Ishikawa, M.4    MacHida, Y.5
  • 30
    • 33845638024 scopus 로고    scopus 로고
    • Loss of ovule identity induced by overexpression of the fertilization-related kinase 2 (ScFRK2)a MAPKKK from Solanum chacoense
    • Mitsumune, M.G., Brien, M.O., Bertrand, C., Tebbji, F., Nantel, A. and Matton, D.P. 2006, Loss of ovule identity induced by overexpression of the fertilization-related kinase 2 (ScFRK2), a MAPKKK from Solanum chacoense, J. Exp. Bot., 57, 4171-4187
    • (2006) J. Exp. Bot. , vol.57 , pp. 4171-4187
    • Mitsumune, M.G.1    Brien, M.O.2    Bertrand, C.3    Tebbji, F.4    Nantel, A.5    Matton, D.P.6
  • 31
    • 3042688707 scopus 로고    scopus 로고
    • OMTK1, a novel MAPKKK, channels oxidative stress signaling through direct MAPK interaction
    • Nakagami, H., Kiegerl, S. and Hirt, H. 2004, OMTK1, a novel MAPKKK, channels oxidative stress signaling through direct MAPK interaction, J. Biol. Chem., 279, 28959-28966
    • (2004) J. Biol. Chem. , vol.279 , pp. 28959-28966
    • Nakagami, H.1    Kiegerl, S.2    Hirt, H.3
  • 32
    • 0032531754 scopus 로고    scopus 로고
    • Suppression of auxin signal transduction by a MAPK cascade in higher plants
    • Kovtun, Y., Chiu, W.L., Zeng, W. and Sheen, J. 1998, Suppression of auxin signal transduction by a MAPK cascade in higher plants, Nature, 395, 716-720
    • (1998) Nature , vol.395 , pp. 716-720
    • Kovtun, Y.1    Chiu, W.L.2    Zeng, W.3    Sheen, J.4
  • 33
    • 0034646362 scopus 로고    scopus 로고
    • Functional analysis of oxidative stress-activated mitogen-activated protein kinase cascade in plants
    • Kovtun, Y., Chiu, W.L., Tena, G. and Sheen, J. 2000, Functional analysis of oxidative stress-activated mitogen-activated protein kinase cascade in plants, Proc. Natl. Acad. Sci. USA, 97, 2940-2945
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 2940-2945
    • Kovtun, Y.1    Chiu, W.L.2    Tena, G.3    Sheen, J.4
  • 34
    • 0742321957 scopus 로고    scopus 로고
    • A MAPKK kinase gene regulates extra-embryonic cell fate in Arabidopsis
    • Lukowitz, W., Roeder, A., Parmenter, D. and Somerville, C. 2004, A MAPKK kinase gene regulates extra-embryonic cell fate in Arabidopsis, Cell, 116, 109-119
    • (2004) Cell , vol.116 , pp. 109-119
    • Lukowitz, W.1    Roeder, A.2    Parmenter, D.3    Somerville, C.4
  • 35
    • 2642567650 scopus 로고    scopus 로고
    • Stomatal development and pattern controlled by a MAPKK kinase
    • Bergmann, D.C., Lukowitz, W. and Somerville, C.R. 2004, Stomatal development and pattern controlled by a MAPKK kinase, Science, 304, 1494-1497
    • (2004) Science , vol.304 , pp. 1494-1497
    • Bergmann, D.C.1    Lukowitz, W.2    Somerville, C.R.3
  • 36
    • 34248650674 scopus 로고    scopus 로고
    • Stomatal development and patterning are regulated by environmentally responsive mitogen-activated protein kinases in Arabidopsis
    • Wang, H., Ngwenyama, N., Liu, Y., Walker, J.C. and Zhang, S. 2007, Stomatal development and patterning are regulated by environmentally responsive mitogen-activated protein kinases in Arabidopsis, Plant Cell, 19, 63-73.
    • (2007) Plant Cell , vol.19 , pp. 63-73
    • Wang, H.1    Ngwenyama, N.2    Liu, Y.3    Walker, J.C.4    Zhang, S.5
  • 37
    • 33845992200 scopus 로고    scopus 로고
    • MEKK1 is required for MPK4 activation and regulates tissue-specific and temperature-dependent cell death in Arabidopsis
    • Ichimura, K., Casais, C., Peck, S.C., Shinozaki, K. and Shirasu, K. 2006, MEKK1 is required for MPK4 activation and regulates tissue-specific and temperature-dependent cell death in Arabidopsis, J. Biol. Chem., 281, 36969-36976
    • (2006) J. Biol. Chem. , vol.281 , pp. 36969-36976
    • Ichimura, K.1    Casais, C.2    Peck, S.C.3    Shinozaki, K.4    Shirasu, K.5
  • 38
    • 33845983310 scopus 로고    scopus 로고
    • A Mitogen-activated protein kinase kinase kinase mediates reactive oxygen species homeostasis in Arabidopsis
    • Nakagami, H., Soukupova, H., Schikora, A., Zarsky, V. and Hirt, H. 2006, A Mitogen-activated protein kinase kinase kinase mediates reactive oxygen species homeostasis in Arabidopsis, J. Biol. Chem., 281, 38697-38704
    • (2006) J. Biol. Chem. , vol.281 , pp. 38697-38704
    • Nakagami, H.1    Soukupova, H.2    Schikora, A.3    Zarsky, V.4    Hirt, H.5
  • 39
    • 0034130561 scopus 로고    scopus 로고
    • Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays
    • Brenner, S., Johnson, M., Bridgham, J., et al. 2000, Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays, Nat. Biotechnol., 18, 630-634
    • (2000) Nat. Biotechnol. , vol.18 , pp. 630-634
    • Brenner, S.1    Johnson, M.2    Bridgham, J.3
  • 40
    • 2942553957 scopus 로고    scopus 로고
    • The use of MPSS for whole-genome transcriptional analysis in Arabidopsis
    • Meyers, B.C., Tej, S.S., Vu, T.H., et al. 2004, The use of MPSS for whole-genome transcriptional analysis in Arabidopsis, Genome Res., 14, 1641-1653
    • (2004) Genome Res. , vol.14 , pp. 1641-1653
    • Meyers, B.C.1    Tej, S.S.2    Vu, T.H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.