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Volumn 10, Issue 5, 2010, Pages 886-901

Combining genetic, historical and geographical data to reconstruct the dynamics of bioinvasions: application to the cane toad Bufo marinus

Author keywords

Bayesian inference; Bioinvasion; Demographic inferences; Genetic data; Historical data; Spatial expansion

Indexed keywords

ANURA; BUFO MARINUS;

EID: 77955736450     PISSN: 1755098X     EISSN: 17550998     Source Type: Journal    
DOI: 10.1111/j.1755-0998.2010.02882.x     Document Type: Article
Times cited : (50)

References (64)
  • 3
    • 0003086752 scopus 로고    scopus 로고
    • Genealogies and geography
    • Harvey PH, Leigh Brown AJ, Maynard Smith J, Nee S. eds, Oxford University Press, Oxford
    • Barton NH, Wilson IJ. Genealogies and geography. New Uses for New Phylogenies 1996, 23-56. Harvey PH, Leigh Brown AJMaynard Smith JNee S. eds, Oxford University Press, Oxford
    • (1996) New Uses for New Phylogenies , pp. 23-56
    • Barton, N.H.1    Wilson, I.J.2
  • 5
    • 58149282899 scopus 로고    scopus 로고
    • Joint determination of topology, divergence time, and immigration in population trees
    • Matsumura S, Forster P, Renfrew C. eds, McDonald Institute for Archaeological Research, Cambridge
    • Beaumont M. Joint determination of topology, divergence time, and immigration in population trees. Simulations, Genetics and Human Prehistory 2008, 135-154. Matsumura SForster PRenfrew C. eds, McDonald Institute for Archaeological Research, Cambridge
    • (2008) Simulations, Genetics and Human Prehistory , pp. 135-154
    • Beaumont, M.1
  • 6
    • 0036964474 scopus 로고    scopus 로고
    • Approximate Bayesian computation in population genetics
    • Beaumont MA, Zhang W, Balding DJ. Approximate Bayesian computation in population genetics. Genetics 2002, 162:2025-2035.
    • (2002) Genetics , vol.162 , pp. 2025-2035
    • Beaumont, M.A.1    Zhang, W.2    Balding, D.J.3
  • 8
    • 73549122582 scopus 로고    scopus 로고
    • Non-linear regression models for Approximate Bayesian Computation
    • Blum MGB, François O. Non-linear regression models for Approximate Bayesian Computation. Statistics and Computing 2010, 20:63-73.
    • (2010) Statistics and Computing , vol.20 , pp. 63-73
    • Blum, M.G.B.1    François, O.2
  • 11
    • 56649113038 scopus 로고    scopus 로고
    • Inferring population history with DIY ABC, a user-friendly approach to approximate Bayesian computation
    • Cornuet JM, Santos F, Beaumont MA. Inferring population history with DIY ABC, a user-friendly approach to approximate Bayesian computation. Bioinformatics 2008, 24:2713-2719.
    • (2008) Bioinformatics , vol.24 , pp. 2713-2719
    • Cornuet, J.M.1    Santos, F.2    Beaumont, M.A.3
  • 12
    • 1342288606 scopus 로고    scopus 로고
    • SPLATCHE, a program to simulate genetic diversity taking into account environmental heterogeneity
    • Currat M, Ray N, Excoffier L. SPLATCHE, a program to simulate genetic diversity taking into account environmental heterogeneity. Molecular Ecology Notes 2004, 4:139-142.
    • (2004) Molecular Ecology Notes , vol.4 , pp. 139-142
    • Currat, M.1    Ray, N.2    Excoffier, L.3
  • 13
    • 13344259999 scopus 로고    scopus 로고
    • A comprehensive map of the human genome based on 5,264 microsatellites
    • Dib C, Faure S, Fizames C. A comprehensive map of the human genome based on 5,264 microsatellites. Nature 1996, 380:152-154.
    • (1996) Nature , vol.380 , pp. 152-154
    • Dib, C.1    Faure, S.2    Fizames, C.3
  • 14
    • 49049149639 scopus 로고
    • The history of introductions of Bufo marinus (Amphibia,Anura); a natural experiment in evolution
    • Easteal S. The history of introductions of Bufo marinus (Amphibia,Anura); a natural experiment in evolution. Biological Journal of the Linnean Society 1981, 16:93-113.
    • (1981) Biological Journal of the Linnean Society , vol.16 , pp. 93-113
    • Easteal, S.1
  • 15
    • 0022912834 scopus 로고
    • The ecological genetics of introduced populations of the giant toad, Bufo marinus (Amphibia, Anura), dispersal and neighborhood size
    • Easteal S, Floyd RB. The ecological genetics of introduced populations of the giant toad, Bufo marinus (Amphibia, Anura), dispersal and neighborhood size. Biological Journal of the Linnean Society of London 1986, 27:17-45.
    • (1986) Biological Journal of the Linnean Society of London , vol.27 , pp. 17-45
    • Easteal, S.1    Floyd, R.B.2
  • 16
    • 0022165639 scopus 로고
    • Continuing geographical spread of Bufo marinus in Australia, range expansion between 1974 and 1980
    • Easteal S, Van Beurden EK, Floyd R, Sabath M. Continuing geographical spread of Bufo marinus in Australia, range expansion between 1974 and 1980. Journal of Herpetology 1985, 19:185-188.
    • (1985) Journal of Herpetology , vol.19 , pp. 185-188
    • Easteal, S.1    Van Beurden, E.K.2    Floyd, R.3    Sabath, M.4
  • 17
    • 0035692236 scopus 로고    scopus 로고
    • Inferring population history from microsatellite and enzyme data in serially introduced cane toads, Bufo marinus
    • Estoup A, Wilson IJ, Sullivan C, Cornuet JM, Moritz C. Inferring population history from microsatellite and enzyme data in serially introduced cane toads, Bufo marinus. Genetics 2001, 159:1671-1687.
    • (2001) Genetics , vol.159 , pp. 1671-1687
    • Estoup, A.1    Wilson, I.J.2    Sullivan, C.3    Cornuet, J.M.4    Moritz, C.5
  • 18
    • 0036718239 scopus 로고    scopus 로고
    • Homoplasy and mutation model at microsatellite loci and their consequence for population genetics analysis
    • Estoup A, Jarne P, Cornuet JM. Homoplasy and mutation model at microsatellite loci and their consequence for population genetics analysis. Molecular Ecolology 2002, 11:1591-1604.
    • (2002) Molecular Ecolology , vol.11 , pp. 1591-1604
    • Estoup, A.1    Jarne, P.2    Cornuet, J.M.3
  • 19
    • 5344241252 scopus 로고    scopus 로고
    • Genetic analysis of complex demographic scenarios, spatially expanding populations of the cane toad, Bufo marinus
    • Estoup A, Beaumont MA, Sennedot F, Moritz C, Cornuet JM. Genetic analysis of complex demographic scenarios, spatially expanding populations of the cane toad, Bufo marinus. Evolution 2004, 58:2021-2036.
    • (2004) Evolution , vol.58 , pp. 2021-2036
    • Estoup, A.1    Beaumont, M.A.2    Sennedot, F.3    Moritz, C.4    Cornuet, J.M.5
  • 20
    • 17444424890 scopus 로고    scopus 로고
    • Bayesian analysis of an admixture model with mutations and arbitrarily linked markers
    • Excoffier L, Estoup A, Cornuet JM. Bayesian analysis of an admixture model with mutations and arbitrarily linked markers. Genetics 2005, 169:1727-1738.
    • (2005) Genetics , vol.169 , pp. 1727-1738
    • Excoffier, L.1    Estoup, A.2    Cornuet, J.M.3
  • 23
    • 0022248129 scopus 로고
    • The rate of range expansion by Bufo marinus in North Australia, 1980-84
    • Freeland WJ, Martin KC. The rate of range expansion by Bufo marinus in North Australia, 1980-84. Australian Wildlife Research 1985, 15:555-559.
    • (1985) Australian Wildlife Research , vol.15 , pp. 555-559
    • Freeland, W.J.1    Martin, K.C.2
  • 24
    • 2342592659 scopus 로고    scopus 로고
    • Long-distance dispersal and human population density allow the prediction of invasive patterns in the horse chestnut leafminer Cameraria ohridella
    • Gilbert M, Grégoire J-C, Freise JF, Heitland W. Long-distance dispersal and human population density allow the prediction of invasive patterns in the horse chestnut leafminer Cameraria ohridella. Journal of Animal Ecology 2004, 73:459-468.
    • (2004) Journal of Animal Ecology , vol.73 , pp. 459-468
    • Gilbert, M.1    Grégoire, J.-C.2    Freise, J.F.3    Heitland, W.4
  • 25
    • 73349141378 scopus 로고    scopus 로고
    • Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data
    • Guillemaud T, Beaumont MA, Ciosi M, Cornuet JM, Estoup A. Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data. Heredity 2010, 104:88-99.
    • (2010) Heredity , vol.104 , pp. 88-99
    • Guillemaud, T.1    Beaumont, M.A.2    Ciosi, M.3    Cornuet, J.M.4    Estoup, A.5
  • 27
    • 19644371954 scopus 로고    scopus 로고
    • Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations
    • Hamilton G, Stoneking M, Excoffier L. Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations. Proceedings of the National Academy of Sciences of the U S A 2005b, 102:7476-7480.
    • (2005) Proceedings of the National Academy of Sciences of the U S A , vol.102 , pp. 7476-7480
    • Hamilton, G.1    Stoneking, M.2    Excoffier, L.3
  • 28
    • 19944431691 scopus 로고    scopus 로고
    • The spatial spread of invasions, new developments in theory and evidence
    • Hasting A, Cuddington K, Davies KF. The spatial spread of invasions, new developments in theory and evidence. Ecology Letters 2005, 8:91-101.
    • (2005) Ecology Letters , vol.8 , pp. 91-101
    • Hasting, A.1    Cuddington, K.2    Davies, K.F.3
  • 29
    • 58149314233 scopus 로고    scopus 로고
    • Testing comparative phylogeographic models of marine vicariance and dispersal using a hierarchical Bayesian approach
    • doi,10.1186/1471-2148-8-322
    • Hickerson MJ, Meyer C. Testing comparative phylogeographic models of marine vicariance and dispersal using a hierarchical Bayesian approach. BMC Evolutionary Biology 2008, 8:322. http://dx.doi.org/10.1186/1471-2148-8-322, doi,10.1186/1471-2148-8-322
    • (2008) BMC Evolutionary Biology , vol.8 , pp. 322
    • Hickerson, M.J.1    Meyer, C.2
  • 30
    • 0001358930 scopus 로고
    • The stepping stone model of genetic structure and the decrease of genetic correlation with distance
    • Kimura M, Weiss WH. The stepping stone model of genetic structure and the decrease of genetic correlation with distance. Genetics 1964, 49:561-576.
    • (1964) Genetics , vol.49 , pp. 561-576
    • Kimura, M.1    Weiss, W.H.2
  • 31
    • 0030426365 scopus 로고    scopus 로고
    • Dispersal data and the spread of invading organisms
    • Kot M, Lewis MA, van den Driessche P. Dispersal data and the spread of invading organisms. Ecology 1996, 77:2027-2042.
    • (1996) Ecology , vol.77 , pp. 2027-2042
    • Kot, M.1    Lewis, M.A.2    van den Driessche, P.3
  • 32
    • 8144219858 scopus 로고    scopus 로고
    • How interaction between ecology and evolution influence contemporary invasion dynamics
    • Lambrinos JG. How interaction between ecology and evolution influence contemporary invasion dynamics. Ecology 2004, 85:2061-2070.
    • (2004) Ecology , vol.85 , pp. 2061-2070
    • Lambrinos, J.G.1
  • 33
    • 7244221627 scopus 로고    scopus 로고
    • SIMCOAL 2.0, a program to simulate genomic diversity over large recombining regions in a subdivided population with a complex history
    • Laval G, Excoffier L. SIMCOAL 2.0, a program to simulate genomic diversity over large recombining regions in a subdivided population with a complex history. Bioinformatics 2004, 20:2485-2487.
    • (2004) Bioinformatics , vol.20 , pp. 2485-2487
    • Laval, G.1    Excoffier, L.2
  • 34
    • 74249110200 scopus 로고    scopus 로고
    • Bayesian computation and model selection without likelihoods
    • Leuenberger C, Wegmann D. Bayesian computation and model selection without likelihoods. Genetics 2010, 184:243-252.
    • (2010) Genetics , vol.184 , pp. 243-252
    • Leuenberger, C.1    Wegmann, D.2
  • 35
    • 0027487708 scopus 로고
    • Biological invasions, lessons for ecology
    • Lodge DM. Biological invasions, lessons for ecology. Trends in Ecology and Evolution 1993, 8:133-137.
    • (1993) Trends in Ecology and Evolution , vol.8 , pp. 133-137
    • Lodge, D.M.1
  • 36
    • 0024265914 scopus 로고
    • The spread of a reinvading species, range expansion in the California sea otter
    • Lubina JA, Levin SA. The spread of a reinvading species, range expansion in the California sea otter. American Naturalist 1988, 131:526-543.
    • (1988) American Naturalist , vol.131 , pp. 526-543
    • Lubina, J.A.1    Levin, S.A.2
  • 41
    • 33847383360 scopus 로고    scopus 로고
    • Rapid expansion of the cane toad (Bufo marinus) invasion front in tropical Australia
    • Phillips BL, Brown GP, Greenlees M, Webb JK, Shine R. Rapid expansion of the cane toad (Bufo marinus) invasion front in tropical Australia. Austral Ecology 2007, 32:169-176.
    • (2007) Austral Ecology , vol.32 , pp. 169-176
    • Phillips, B.L.1    Brown, G.P.2    Greenlees, M.3    Webb, J.K.4    Shine, R.5
  • 42
    • 49849086431 scopus 로고    scopus 로고
    • Reid's paradox revisited, the evolution of dispersal kernels during range expansion
    • Phillips BL, Brown GP, Travis JM, Shine R. Reid's paradox revisited, the evolution of dispersal kernels during range expansion. American Naturalist 2008, 172(Suppl. 1):S34-S48.
    • (2008) American Naturalist , vol.172 , Issue.SUPPL. 1
    • Phillips, B.L.1    Brown, G.P.2    Travis, J.M.3    Shine, R.4
  • 44
    • 29144443594 scopus 로고    scopus 로고
    • Tracing the origin and spread of agriculture in Europe
    • Pinhasi R, Fort J, Ammerman AJ. Tracing the origin and spread of agriculture in Europe. Plos Biology 2005, 3:12.
    • (2005) Plos Biology , vol.3 , pp. 12
    • Pinhasi, R.1    Fort, J.2    Ammerman, A.J.3
  • 45
    • 0032096539 scopus 로고    scopus 로고
    • Microsatellite behavior with range constraints, parameter estimation and improved distances for use in phylogenetic reconstruction
    • Pollock DD, Bergman A, Feldman MW, Goldstein DB. Microsatellite behavior with range constraints, parameter estimation and improved distances for use in phylogenetic reconstruction. Theoretical Population Biology 1998, 53:256-271.
    • (1998) Theoretical Population Biology , vol.53 , pp. 256-271
    • Pollock, D.D.1    Bergman, A.2    Feldman, M.W.3    Goldstein, D.B.4
  • 47
    • 23744491421 scopus 로고    scopus 로고
    • Recovering the geographic origin of early modern humans by realistic and spatially explicit simulations
    • Ray N, Currat M, Berthier P, Excoffier L. Recovering the geographic origin of early modern humans by realistic and spatially explicit simulations. Genome Research 2005, 15:1161-1167.
    • (2005) Genome Research , vol.15 , pp. 1161-1167
    • Ray, N.1    Currat, M.2    Berthier, P.3    Excoffier, L.4
  • 48
    • 34547695669 scopus 로고    scopus 로고
    • Testing fundamental evolutionary questions at large spatial and demographic scales
    • Sax DF, Stachowicz JJ, Gaines SD. eds, Sinauer Associates, Inc. Publishers, Sunderland, Massachusetts, USA
    • Rice WR, Sax DF. Testing fundamental evolutionary questions at large spatial and demographic scales. Species Invasions, Insights into Ecology, Evolution, and Biogeography 2005, 291-313. Sax DF, Stachowicz JJGaines SD. eds, Sinauer Associates, Inc. Publishers, Sunderland, Massachusetts, USA
    • (2005) Species Invasions, Insights into Ecology, Evolution, and Biogeography , pp. 291-313
    • Rice, W.R.1    Sax, D.F.2
  • 50
    • 0034597765 scopus 로고    scopus 로고
    • Global spread of microorganisms by ships
    • Ruiz GM, Rawling TK, Dobbs FC. Global spread of microorganisms by ships. Nature 2000, 408:49-50.
    • (2000) Nature , vol.408 , pp. 49-50
    • Ruiz, G.M.1    Rawling, T.K.2    Dobbs, F.C.3
  • 51
    • 77955738107 scopus 로고    scopus 로고
    • Species invasions, insights into ecology, evolution, and biogeography
    • Publishers, Sunderland, Massachusetts, USA, p
    • Sax DF, Stachowicz JJ, Gaines SD. Species invasions, insights into ecology, evolution, and biogeography. Sinauer Associates, Inc 2005, Publishers, Sunderland, Massachusetts, USA, p
    • (2005) Sinauer Associates, Inc
    • Sax, D.F.1    Stachowicz, J.J.2    Gaines, S.D.3
  • 52
    • 0036228879 scopus 로고    scopus 로고
    • Nomadic movement in tropical toads
    • Schwarzkopf L, Alford RA. Nomadic movement in tropical toads. Oikos 2002, 96:492-506.
    • (2002) Oikos , vol.96 , pp. 492-506
    • Schwarzkopf, L.1    Alford, R.A.2
  • 53
    • 0031214923 scopus 로고    scopus 로고
    • Effective number of breeding adults in Bufo bufo estimated from age-specific variation at minisatellite loci
    • Scribner KT, Arntzen JW, Burke T. Effective number of breeding adults in Bufo bufo estimated from age-specific variation at minisatellite loci. Molecular Ecology 1997, 6:701-712.
    • (1997) Molecular Ecology , vol.6 , pp. 701-712
    • Scribner, K.T.1    Arntzen, J.W.2    Burke, T.3
  • 54
    • 33748541658 scopus 로고    scopus 로고
    • Evolution of intrahost HIV-1 genetic diversity during chronic infection
    • Shriner D, Liu Y, Nickle DC, Mullins JI. Evolution of intrahost HIV-1 genetic diversity during chronic infection. Evolution 2006, 60:1165-1176.
    • (2006) Evolution , vol.60 , pp. 1165-1176
    • Shriner, D.1    Liu, Y.2    Nickle, D.C.3    Mullins, J.I.4
  • 55
    • 0025048184 scopus 로고
    • Detecting Isolation by distance using phylogenies of genes
    • Slatkin M, Maddison WP. Detecting Isolation by distance using phylogenies of genes. Genetics 1990, 126:249-260.
    • (1990) Genetics , vol.126 , pp. 249-260
    • Slatkin, M.1    Maddison, W.P.2
  • 56
    • 0004231341 scopus 로고
    • Society for Industrial and Applied Mathematics, Philadelphia
    • Solomon H. Geometric Probability 1978, Society for Industrial and Applied Mathematics, Philadelphia
    • (1978) Geometric Probability
    • Solomon, H.1
  • 57
    • 33746419713 scopus 로고    scopus 로고
    • Using approximate Bayesian computation to estimate tuberculosis transmission parameters from genotype data
    • Tanaka MM, Francis RF, Luciani F, Sisson SA. Using approximate Bayesian computation to estimate tuberculosis transmission parameters from genotype data. Genetics 2006, 173:1511-1520.
    • (2006) Genetics , vol.173 , pp. 1511-1520
    • Tanaka, M.M.1    Francis, R.F.2    Luciani, F.3    Sisson, S.A.4
  • 59
  • 60
    • 40549101347 scopus 로고    scopus 로고
    • A toad more traveled, the heterogeneous invasion dynamics of cane toads in Australia
    • Urban MC, Phillips BL, Skelly DK, Shine R. A toad more traveled, the heterogeneous invasion dynamics of cane toads in Australia. American Naturalist 2008, 171:134-148.
    • (2008) American Naturalist , vol.171 , pp. 134-148
    • Urban, M.C.1    Phillips, B.L.2    Skelly, D.K.3    Shine, R.4
  • 61
    • 60349093847 scopus 로고    scopus 로고
    • Origins and Genetic Diversity of Pygmy Hunter-Gatherers from Western Central Africa
    • Verdu P, Austerlitz F, Estoup A. Origins and Genetic Diversity of Pygmy Hunter-Gatherers from Western Central Africa. Current Biology 2009, 19:312-318.
    • (2009) Current Biology , vol.19 , pp. 312-318
    • Verdu, P.1    Austerlitz, F.2    Estoup, A.3
  • 62
    • 0031970783 scopus 로고    scopus 로고
    • The dynamics of plant invasions, a case study of three exotic goldenrod species (Solidago L.) in Europe
    • Weber E. The dynamics of plant invasions, a case study of three exotic goldenrod species (Solidago L.) in Europe. Journal of Biogeography 1998, 25:147-154.
    • (1998) Journal of Biogeography , vol.25 , pp. 147-154
    • Weber, E.1
  • 63
    • 70350136774 scopus 로고    scopus 로고
    • Efficient Approximate Bayesian Computation coupled with Markov Chain Monte Carlo without likelihood
    • Wegmann D, Leuenberger C, Excoffier L. Efficient Approximate Bayesian Computation coupled with Markov Chain Monte Carlo without likelihood. Genetics 2009, 182:1207-1218.
    • (2009) Genetics , vol.182 , pp. 1207-1218
    • Wegmann, D.1    Leuenberger, C.2    Excoffier, L.3
  • 64
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham CC. Estimating F-statistics for the analysis of population structure. Evolution 1984, 38:1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2


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