Molecular characterization and genotyping of human rotavirus strains in abidjan, cote d'ivoire

Journal of Infectious Diseases

Volumn 202, Issue SUPPL. 1, 2010, Pages

  Akran, Veronique ^a   Peenze, I ^b   Akoua Koffi, C ^a   Kette, H ^a   De Beer, M C ^b   Dosso, M ^a   Steele, A D ^b,c  

^a INSTITUT PASTEUR DE CÔTE D'IVOIRE   (Côte d’Ivoire)

^b UNIVERSITY OF LIMPOPO   (South Africa)

^c PATH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACUTE DIARRHEA; ACUTE GASTROENTERITIS; ARTICLE; CHILD; CONTROLLED STUDY; COTE D'IVOIRE; ENZYME LINKED IMMUNOSORBENT ASSAY; FECES ANALYSIS; GENOTYPE; HUMAN; HUMAN ROTAVIRUS; INFANT; INFANTILE GASTROENTERITIS; MAJOR CLINICAL STUDY; NONHUMAN; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRESCHOOL CHILD; PRIORITY JOURNAL; VIRUS CHARACTERIZATION;

ANTIGENS, VIRAL; CAPSID PROTEINS; CHILD, PRESCHOOL; COTE D'IVOIRE; FECES; GENOTYPE; HUMANS; INFANT; RNA, VIRAL; ROTAVIRUS; ROTAVIRUS INFECTIONS; TIME FACTORS;

EID: 77955680307     PISSN: 00221899     EISSN: None     Source Type: Journal    
DOI: 10.1086/653567     Document Type: Article

References (32)

1. Kapikian AZ, Chanock R.M. Rotaviruses. In: Fields BN, Knipe DM, Howley PM et al, eds. Fields virology. Philadelphia, PA: Lippincott- Raven, 1996:1657-1708.
2. Parashar UD, Gibson CJ, Bresee JS, Glass R.I. Rotavirus and severe childhood diarrhoea. Emerg Infect Dis 2006; 12:304-306.
3. Armah GE, Mingle JAA, Dodoo AK et al Seasonality of rotavirus infection in Ghana. Ann Trop Pediatr 1994; 14:223-230.
4. Gomwalk NE, Gosham LT, Umoh U.J. Rotavirus gastroenteritis in pediatric diarrhoea in Jos, Nigeria. J Trop Pediatr 1990; 36:52-55.
5. Molbak K,Wested N, Hojlyng N et al The aetiology of early childhood diarrhoea: a community study from Guinea-Bissau. J Infect Dis 1994; 169:581-587.
6. Olusanya O, Taiwo O. Rotavirus as an aetiological agent of acute childhood diarrhoea in Ile-Ife, Nigeria. E Afr Med J 1989; 66:100-104.
7. Rowland MGM, Goh SGJ, Williams K et al Epidemiological aspects of rotavirus infection in young Gambian children. Ann Trop Pediatr 1985; 5:23-28.
8. Cowpli-Bony M, Loukou YG, Teby A, Sess D. Technique immunoenzymatique epidemiologie des diarrhees aigues a rotavirus chez 115 enfants diarrheiques atteints de malnutrition a Abidjan. Rev Med Cote d'Ivoire 1987; 79:21-25.
9. Lougou YG, Selly E. Sous-groupes de rotavirus humains en Cote d'Ivoire determines par immunoenzymologie. Rev Med Cote d'Ivoire 1987; 81:4-9.
10. Akoua-Koffi C, Faye-Kette H, Kouakou K et al Interet de l'utilisation d'un test au latex (Rotalex) pour le depistage de rotavirus dans les selles diarrheiques a Abidjan. Med Afr Noire 1993; 40:599-602.
11. Akran VA, Akoua-Koffi C, Hette K, Dosso M. Electrophoretypes of rotavirus in children <5 years of age in Abidjan, Cote d'Ivoire in 1997. Afr J Health Sci 2001; 8:33-38
12. Niangue-Beugre NN, Couitchere L, Oulai SM, Cisse L, Enoh J. Aspects epidemiologiques, cliniques et etiologiques des diarrhees aigues des enfants ages de 1 mois a 5 ans recus dans le service de pediatrie du CHU de Treichville (Cote d'Ivoire). Arch de Pediatrie 2006; 13 : 395-398.
13. Akoua-Koffi C, Akran V, Peenze I et al Epidemiological and virological aspects rotavirus diarrhoea in Abidjan, Cote d'Ivoire (1997-2000). Bull Soc Pathol Exot 2007; 100 :246-249.
14. Centers for Disease Control and Prevention. Rotavirus surveillance: worldwide, 2001-2007. MMWR Morb MOrtal Wkly Rep 2008; 57: 1255-1257.
15. Armah GE, Hori H, Anyanful A et al Human rotavirus subgroups and severity of associated diarrhoea in Ghana. Afr J Health Sci 1995;2: 388-391.
16. Adah MI, Rohwedder A, Olaleye OD, Durojaiye OA, Werchau H. Further characterization of field strains of rotavirus from Nigeria. VP4 P[6] most frequently identified among symptomatically infected children. J Trop Pediatr 1997; 43(5):267-274.
17. Fischer TK, Valentiner-Branth P, Steinsland H. Protective immunity after natural rotavirus infection: a community cohort study of newborn children in Guinea-Bissau, West Africa. J Infect Dis 2002; 186:593-597.
18. Aminu M, Ahmad AA, Umoh JU, Dewar J, Esona MD, Steele A.D. Epidemiology of rotavirus in North-Western Nigeria. J Trop Pediatr 2008; 54:340-342.
19. Armah GE, Pager CT, Asmah RH et al Prevalence of unusual human rotavirus strains in Ghanaian children. J Med Virol 2001; 63:67-71.
20. Steele AD, Ivanoff B. Rotavirus strains circulating in Africa during 1997-1999: emergence of G9 and P[6] strains. Vaccine 2003; 21: 361-367.
21. Dennehy P.H. Rotavirus vaccines: an overview. Clin Microbiol Rev 2008; 21:198-208.
22. Steele AD, Alexander J.J. Molecular epidemiology of rotavirus in black infants in South Africa. J Clin Microbiol 1987; 25:2384-2387.
23. Gouvea V, Glass RI, Woods P et al Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens. J Clin Microbiol 1990; 28:276-282.
24. Das BK, Gentsch JR, Cicirello HG et al Characterization of rotavirus strains from newborns in New Delhi, India. J Clin Microbiol 1994; 32:1820-1822.
25. Cunliffe NA, Gondwe JS, Broadhead RL et al Rotavirus G and P types in children with acute diarrhoea in Blantyre, Malawi from 1997-1998: predominance of novel P[6]G8 strains. J Med Virol 1999; 57:308-312.
26. Gentsch J, Woods PA, Ramachandran M et al Review of G and P typing results from a global collection of rotavirus strains: implications for vaccine development. J Infect Dis 1996; 174:S30-S36.
27. Iturriza-Gómara M, Kang G, Gray J. Rotavirus genotyping: keeping up with an evolving population of human rotaviruses. J Clin Virol 2004; 31:259-265.
28. Cunliffe NA, Kilgore PE, Bresee JS et al Epidemiology of rotavirus diarrhoea in Africa: a review to assess the need for rotavirus immunization. Bull WHO 1998; 76:525-537.
29. Pennap G, Peenze I, de Beer MC et al VP6 subgroup and VP7 serotype of human rotaviruses in Zaria, Northern Nigeria. J Trop Paediatr 2000; 46:344-347.
30. Adah MI, Rohwedder A, Olaleyle OD, Werchau H. Nigerian rotavirus serotype G8 could not be typed by PCR due to nucleotide mutation at the 3' end of the primer binding site. Arch Virol 1997; 142: 1881-1887.
31. Fischer TK, Page NA, Griffin DD et al Characterization of incompletely typed rotavirus strains from Guinea-Bissau: identification of G8 and G9 types and a high frequency of mixed infections. Virology 2003; 311(1):125-133.
32. Salu OB, Audu R, Geyer A, Steele AD, Oyefolu A.O. Molecular epidemiology of rotavirus strains in Nigeria: detection of unusual strains with G2P[6] and G8P[1] specificities. J Clin Microbiol 2003; 41: 913-914.