메뉴 건너뛰기




Volumn 465, Issue 1-2, 2010, Pages 53-60

Characterization of the human PANK2 promoter

Author keywords

FOXN4; HnRNPA B; NF Y; Pantothenate kinase; PKAN

Indexed keywords

HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN; NUCLEAR FACTOR Y; PANTOTHENATE KINASE 2; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR FOXN1; UNCLASSIFIED DRUG;

EID: 77955587648     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2010.06.011     Document Type: Article
Times cited : (12)

References (35)
  • 1
    • 0025278259 scopus 로고
    • Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences
    • Bucher P. Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences. J. Mol. Biol. 1990, 212:563-578.
    • (1990) J. Mol. Biol. , vol.212 , pp. 563-578
    • Bucher, P.1
  • 2
    • 0038239281 scopus 로고    scopus 로고
    • Specific interaction of heterogeneous nuclear ribonucleoprotein A1 with the -219T allelic form modulates APOE promoter activity
    • Campillos M., Lamas J.R., Garcia M.A., Bullido M.J., Valdivieso F., Vazquez J. Specific interaction of heterogeneous nuclear ribonucleoprotein A1 with the -219T allelic form modulates APOE promoter activity. Nucleic Acids Res. 2003, 31:3063-3070.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3063-3070
    • Campillos, M.1    Lamas, J.R.2    Garcia, M.A.3    Bullido, M.J.4    Valdivieso, F.5    Vazquez, J.6
  • 3
    • 21444443478 scopus 로고    scopus 로고
    • MatInspector and beyond: promoter analysis based on transcription factor binding sites
    • Cartharius K., et al. MatInspector and beyond: promoter analysis based on transcription factor binding sites. Bioinformatics 2005, 21:2933-2942.
    • (2005) Bioinformatics , vol.21 , pp. 2933-2942
    • Cartharius, K.1
  • 4
    • 0038623773 scopus 로고    scopus 로고
    • Heterogeneous nuclear ribonucleoprotein (hnRNP) binding to hormone response elements: a cause of vitamin D resistance
    • Chen H., Hewison M., Hu B., Adams J.S. Heterogeneous nuclear ribonucleoprotein (hnRNP) binding to hormone response elements: a cause of vitamin D resistance. Proc. Nat. Acad. Sci. USA 2003, 100:6109-6114.
    • (2003) Proc. Nat. Acad. Sci. USA , vol.100 , pp. 6109-6114
    • Chen, H.1    Hewison, M.2    Hu, B.3    Adams, J.S.4
  • 5
    • 0034891327 scopus 로고    scopus 로고
    • Foxn4-a new member of the forkhead gene family is expressed in the retina
    • Gouge A., Holt J., Hardy A.P., Sowden J.C., Smith H.K. Foxn4-a new member of the forkhead gene family is expressed in the retina. Mech. Dev. 2001, 107:203-206.
    • (2001) Mech. Dev. , vol.107 , pp. 203-206
    • Gouge, A.1    Holt, J.2    Hardy, A.P.3    Sowden, J.C.4    Smith, H.K.5
  • 6
    • 70350241253 scopus 로고    scopus 로고
    • Heterogeneous nuclear ribonucleoprotein A2 is a common transcriptional coactivator in the nuclear transcription response to mitochondrial respiratory stress
    • Guha M., Pan H., Fang J.K., Avadhani N.G. Heterogeneous nuclear ribonucleoprotein A2 is a common transcriptional coactivator in the nuclear transcription response to mitochondrial respiratory stress. Mol. Biol. Cell 2009, 20:4107-4119.
    • (2009) Mol. Biol. Cell , vol.20 , pp. 4107-4119
    • Guha, M.1    Pan, H.2    Fang, J.K.3    Avadhani, N.G.4
  • 7
    • 63449132795 scopus 로고    scopus 로고
    • Nuclear functions of heterogeneous nuclear ribonucleoproteins A/B
    • He Y., Smith R. Nuclear functions of heterogeneous nuclear ribonucleoproteins A/B. Cell. Mol. Life Sci. 2009, 66:1239-1256.
    • (2009) Cell. Mol. Life Sci. , vol.66 , pp. 1239-1256
    • He, Y.1    Smith, R.2
  • 8
    • 0037322485 scopus 로고    scopus 로고
    • An isoform of hPANK2, deficient in pantothenate kinase-associated neurodegeneration, localizes to mitochondria
    • Hortnagel K., Prokisch H., Meitinger T. An isoform of hPANK2, deficient in pantothenate kinase-associated neurodegeneration, localizes to mitochondria. Hum. Mol. Genet. 2003, 12:321-327.
    • (2003) Hum. Mol. Genet. , vol.12 , pp. 321-327
    • Hortnagel, K.1    Prokisch, H.2    Meitinger, T.3
  • 9
    • 69049116234 scopus 로고    scopus 로고
    • Subtype specification of GABAergic amacrine cells by the orphan nuclear receptor Nr4a2/Nurr1
    • Jiang H., Xiang M. Subtype specification of GABAergic amacrine cells by the orphan nuclear receptor Nr4a2/Nurr1. J. Neurosci. 2009, 29:10449-10459.
    • (2009) J. Neurosci. , vol.29 , pp. 10449-10459
    • Jiang, H.1    Xiang, M.2
  • 10
  • 11
    • 1842504252 scopus 로고    scopus 로고
    • Mitochondrial localization of human PANK2 and hypotheses of secondary iron accumulation in pantothenate kinase-associated neurodegeneration
    • Johnson M.A., et al. Mitochondrial localization of human PANK2 and hypotheses of secondary iron accumulation in pantothenate kinase-associated neurodegeneration. Ann. NY Acad. Sci. 2004, 1012:282-298.
    • (2004) Ann. NY Acad. Sci. , vol.1012 , pp. 282-298
    • Johnson, M.A.1
  • 12
    • 16644382513 scopus 로고    scopus 로고
    • Human FOX gene family (Review)
    • Katoh M. Human FOX gene family (Review). Int. J. Oncol. 2004, 25:1495-1500.
    • (2004) Int. J. Oncol. , vol.25 , pp. 1495-1500
    • Katoh, M.1
  • 13
    • 0036079158 scopus 로고    scopus 로고
    • The human genome browser at UCSC
    • Kent W.J., et al. The human genome browser at UCSC. Genome Res. 2002, 12:996-1006.
    • (2002) Genome Res. , vol.12 , pp. 996-1006
    • Kent, W.J.1
  • 14
    • 30044442791 scopus 로고    scopus 로고
    • Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes
    • Kimura K., et al. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Genome Res. 2006, 16:55-65.
    • (2006) Genome Res. , vol.16 , pp. 55-65
    • Kimura, K.1
  • 15
    • 12744280679 scopus 로고    scopus 로고
    • Altered neuronal mitochondrial coenzyme A synthesis in neurodegeneration with brain iron accumulation caused by abnormal processing, stability, and catalytic activity of mutant pantothenate kinase 2
    • Kotzbauer P.T., Truax A.C., Trojanowski J.Q., Lee V.M. Altered neuronal mitochondrial coenzyme A synthesis in neurodegeneration with brain iron accumulation caused by abnormal processing, stability, and catalytic activity of mutant pantothenate kinase 2. J. Neurosci. 2005, 25:689-698.
    • (2005) J. Neurosci. , vol.25 , pp. 689-698
    • Kotzbauer, P.T.1    Truax, A.C.2    Trojanowski, J.Q.3    Lee, V.M.4
  • 16
    • 36448991500 scopus 로고    scopus 로고
    • Clustal W and Clustal X version 2.0
    • Larkin M.A., et al. Clustal W and Clustal X version 2.0. Bioinformatics 2007, 23:2947-2948.
    • (2007) Bioinformatics , vol.23 , pp. 2947-2948
    • Larkin, M.A.1
  • 17
    • 0034618358 scopus 로고    scopus 로고
    • Heterogeneous nuclear ribonucleoproteins as regulators of gene expression through interactions with the human thymidine kinase promoter
    • Lau J.S., et al. Heterogeneous nuclear ribonucleoproteins as regulators of gene expression through interactions with the human thymidine kinase promoter. J. Cell. Biochem. 2000, 79:395-406.
    • (2000) J. Cell. Biochem. , vol.79 , pp. 395-406
    • Lau, J.S.1
  • 20
    • 23044502252 scopus 로고    scopus 로고
    • Foxn4 acts synergistically with Mash1 to specify subtype identity of V2 interneurons in the spinal cord
    • Li S., Misra K., Matise M.P., Xiang M. Foxn4 acts synergistically with Mash1 to specify subtype identity of V2 interneurons in the spinal cord. Proc. Nat. Acad. Sci. USA 2005, 102:10688-10693.
    • (2005) Proc. Nat. Acad. Sci. USA , vol.102 , pp. 10688-10693
    • Li, S.1    Misra, K.2    Matise, M.P.3    Xiang, M.4
  • 21
    • 0032030308 scopus 로고    scopus 로고
    • A survey of 178 NF-Y binding CCAAT boxes
    • Mantovani R. A survey of 178 NF-Y binding CCAAT boxes. Nucleic Acids Res. 1998, 26:1135-1143.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 1135-1143
    • Mantovani, R.1
  • 22
    • 0032851812 scopus 로고    scopus 로고
    • The molecular biology of the CCAAT-binding factor NF-Y
    • Mantovani R. The molecular biology of the CCAAT-binding factor NF-Y. Gene 1999, 239:15-27.
    • (1999) Gene , vol.239 , pp. 15-27
    • Mantovani, R.1
  • 23
    • 3242878193 scopus 로고    scopus 로고
    • ECR Browser: a tool for visualizing and accessing data from comparisons of multiple vertebrate genomes
    • Ovcharenko I., Nobrega M.A., Loots G.G., Stubbs L. ECR Browser: a tool for visualizing and accessing data from comparisons of multiple vertebrate genomes. Nucleic Acids Res. 2004, 32:W280-W286.
    • (2004) Nucleic Acids Res. , vol.32
    • Ovcharenko, I.1    Nobrega, M.A.2    Loots, G.G.3    Stubbs, L.4
  • 24
    • 12744253685 scopus 로고    scopus 로고
    • Mulan: multiple-sequence local alignment and visualization for studying function and evolution
    • Ovcharenko I., et al. Mulan: multiple-sequence local alignment and visualization for studying function and evolution. Genome Res. 2005, 15:184-194.
    • (2005) Genome Res. , vol.15 , pp. 184-194
    • Ovcharenko, I.1
  • 25
    • 0033954772 scopus 로고    scopus 로고
    • Pantothenate kinase regulation of the intracellular concentration of coenzyme A
    • Rock C.O., Calder R.B., Karim M.A., Jackowski S. Pantothenate kinase regulation of the intracellular concentration of coenzyme A. J. Biol. Chem. 2000, 275:1377-1383.
    • (2000) J. Biol. Chem. , vol.275 , pp. 1377-1383
    • Rock, C.O.1    Calder, R.B.2    Karim, M.A.3    Jackowski, S.4
  • 26
    • 0037193667 scopus 로고    scopus 로고
    • The murine pantothenate kinase (Pank1) gene encodes two differentially regulated pantothenate kinase isozymes
    • Rock C.O., Karim M.A., Zhang Y.M., Jackowski S. The murine pantothenate kinase (Pank1) gene encodes two differentially regulated pantothenate kinase isozymes. Gene 2002, 291:35-43.
    • (2002) Gene , vol.291 , pp. 35-43
    • Rock, C.O.1    Karim, M.A.2    Zhang, Y.M.3    Jackowski, S.4
  • 27
    • 0030991733 scopus 로고    scopus 로고
    • The nude gene encodes a sequence-specific DNA binding protein with homologs in organisms that lack an anticipatory immune system
    • Schlake T., Schorpp M., Nehls M., Boehm T. The nude gene encodes a sequence-specific DNA binding protein with homologs in organisms that lack an anticipatory immune system. Proc. Nat. Acad. Sci. USA 1997, 94:3842-3847.
    • (1997) Proc. Nat. Acad. Sci. USA , vol.94 , pp. 3842-3847
    • Schlake, T.1    Schorpp, M.2    Nehls, M.3    Boehm, T.4
  • 28
    • 0028920041 scopus 로고
    • Recombinant rat CBF-C, the third subunit of CBF/NFY, allows formation of a protein-DNA complex with CBF-A and CBF-B and with yeast HAP2 and HAP3
    • Sinha S., Maity S.N., Lu J., de Crombrugghe B. Recombinant rat CBF-C, the third subunit of CBF/NFY, allows formation of a protein-DNA complex with CBF-A and CBF-B and with yeast HAP2 and HAP3. Proc. Nat. Acad. Sci. USA 1995, 92:1624-1628.
    • (1995) Proc. Nat. Acad. Sci. USA , vol.92 , pp. 1624-1628
    • Sinha, S.1    Maity, S.N.2    Lu, J.3    de Crombrugghe, B.4
  • 29
    • 0345603004 scopus 로고    scopus 로고
    • The CpG island searcher: a new WWW resource
    • Takai D., Jones P.A. The CpG island searcher: a new WWW resource. In Silico Biol. 2003, 3:235-240.
    • (2003) In Silico Biol. , vol.3 , pp. 235-240
    • Takai, D.1    Jones, P.A.2
  • 30
    • 16844386315 scopus 로고    scopus 로고
    • Regulation of gamma-fibrinogen chain expression by heterogeneous nuclear ribonucleoprotein A1
    • Xia H. Regulation of gamma-fibrinogen chain expression by heterogeneous nuclear ribonucleoprotein A1. J. Biol. Chem. 2005, 280:13171-13178.
    • (2005) J. Biol. Chem. , vol.280 , pp. 13171-13178
    • Xia, H.1
  • 31
    • 0031967332 scopus 로고    scopus 로고
    • Identification of human gene core promoters in silico
    • Zhang M.Q. Identification of human gene core promoters in silico. Genome Res. 1998, 8:319-326.
    • (1998) Genome Res. , vol.8 , pp. 319-326
    • Zhang, M.Q.1
  • 32
    • 33644864274 scopus 로고    scopus 로고
    • Biochemical properties of human pantothenate kinase 2 isoforms and mutations linked to pantothenate kinase-associated neurodegeneration
    • Zhang Y.M., Rock C.O., Jackowski S. Biochemical properties of human pantothenate kinase 2 isoforms and mutations linked to pantothenate kinase-associated neurodegeneration. J. Biol. Chem. 2006, 281:107-114.
    • (2006) J. Biol. Chem. , vol.281 , pp. 107-114
    • Zhang, Y.M.1    Rock, C.O.2    Jackowski, S.3
  • 35
    • 3142696224 scopus 로고    scopus 로고
    • CCAAT/enhancer-binding protein alpha (C/EBPalpha) activates transcription of the human microsomal epoxide hydrolase gene (EPHX1) through the interaction with DNA-bound NF-Y
    • Zhu Q.S., Qian B., Levy D. CCAAT/enhancer-binding protein alpha (C/EBPalpha) activates transcription of the human microsomal epoxide hydrolase gene (EPHX1) through the interaction with DNA-bound NF-Y. J. Biol. Chem. 2004, 279:29902-29910.
    • (2004) J. Biol. Chem. , vol.279 , pp. 29902-29910
    • Zhu, Q.S.1    Qian, B.2    Levy, D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.