-
1
-
-
68949209789
-
HLA-associated immune escape pathways in HIV-1 subtype B Gag, Pol and Nef proteins
-
Brumme Z.L., John M., Carlson J.M., Brumme C.J., Chan D., Brockman M.A., et al. HLA-associated immune escape pathways in HIV-1 subtype B Gag, Pol and Nef proteins. PLoS One 2009, 4(8):e6687.
-
(2009)
PLoS One
, vol.4
, Issue.8
-
-
Brumme, Z.L.1
John, M.2
Carlson, J.M.3
Brumme, C.J.4
Chan, D.5
Brockman, M.A.6
-
2
-
-
0038806352
-
Enhanced detection of human immunodeficiency virus type 1-specific T-cell responses to highly variable regions by using peptides based on autologous virus sequences
-
Altfeld M., Addo M.M., Shankarappa R., Lee P.K., Allen T.M., Yu X.G., et al. Enhanced detection of human immunodeficiency virus type 1-specific T-cell responses to highly variable regions by using peptides based on autologous virus sequences. J Virol 2003, 77(13):7330-7340.
-
(2003)
J Virol
, vol.77
, Issue.13
, pp. 7330-7340
-
-
Altfeld, M.1
Addo, M.M.2
Shankarappa, R.3
Lee, P.K.4
Allen, T.M.5
Yu, X.G.6
-
3
-
-
48749103238
-
Impact of MHC class I diversity on immune control of immunodeficiency virus replication
-
Goulder P.J., Watkins D.I. Impact of MHC class I diversity on immune control of immunodeficiency virus replication. Nat Rev 2008, 8(8):619-630.
-
(2008)
Nat Rev
, vol.8
, Issue.8
, pp. 619-630
-
-
Goulder, P.J.1
Watkins, D.I.2
-
4
-
-
33846822070
-
Precise identification of a human immunodeficiency virus type 1 antigen processing mutant
-
Zimbwa P., Milicic A., Frater J., Scriba T.J., Willis A., Goulder P.J.R., et al. Precise identification of a human immunodeficiency virus type 1 antigen processing mutant. J Virol 2007, 81(4):2031-2038.
-
(2007)
J Virol
, vol.81
, Issue.4
, pp. 2031-2038
-
-
Zimbwa, P.1
Milicic, A.2
Frater, J.3
Scriba, T.J.4
Willis, A.5
Goulder, P.J.R.6
-
5
-
-
0035115840
-
Identification of most frequent HLA class I antigen specificities in Botswana: relevance for HIV vaccine design
-
Novitsky V., Flores-Villanueva P.O., Chigwedere P., Gaolekwe S., Bussman H., Sebetso G., et al. Identification of most frequent HLA class I antigen specificities in Botswana: relevance for HIV vaccine design. Hum Immunol 2001, 62(2):146-156.
-
(2001)
Hum Immunol
, vol.62
, Issue.2
, pp. 146-156
-
-
Novitsky, V.1
Flores-Villanueva, P.O.2
Chigwedere, P.3
Gaolekwe, S.4
Bussman, H.5
Sebetso, G.6
-
6
-
-
0037165969
-
Evidence of HIV-1 adaptation to HLA-restricted immune responses at a population level
-
Moore C.B., John M., James I.R., Christiansen F.T., Witt C.S., Mallal S.A. Evidence of HIV-1 adaptation to HLA-restricted immune responses at a population level. Science 2002, 296(5572):1439-1443.
-
(2002)
Science
, vol.296
, Issue.5572
, pp. 1439-1443
-
-
Moore, C.B.1
John, M.2
James, I.R.3
Christiansen, F.T.4
Witt, C.S.5
Mallal, S.A.6
-
7
-
-
34547643061
-
Evidence of differential HLA class I-mediated viral evolution in functional and accessory/regulatory genes of HIV-1
-
Brumme Z.L., Brumme C.J., Heckerman D., Korber B.T., Daniels M., Carlson J., et al. Evidence of differential HLA class I-mediated viral evolution in functional and accessory/regulatory genes of HIV-1. PLoS Pathog 2007, 3(8):e121.
-
(2007)
PLoS Pathog
, vol.3
, Issue.8
-
-
Brumme, Z.L.1
Brumme, C.J.2
Heckerman, D.3
Korber, B.T.4
Daniels, M.5
Carlson, J.6
-
8
-
-
43849084874
-
HIV evolution in response to HLA-restricted CTL selection pressures: a population-based perspective
-
Carlson J.M., Brumme Z.L. HIV evolution in response to HLA-restricted CTL selection pressures: a population-based perspective. Microbes Infect 2008, 10(5):455-461.
-
(2008)
Microbes Infect
, vol.10
, Issue.5
, pp. 455-461
-
-
Carlson, J.M.1
Brumme, Z.L.2
-
9
-
-
45749104088
-
HLA class I-driven evolution of human immunodeficiency virus type 1 subtype c proteome: immune escape and viral load
-
Rousseau C.M., Daniels M.G., Carlson J.M., Kadie C., Crawford H., Prendergast A., et al. HLA class I-driven evolution of human immunodeficiency virus type 1 subtype c proteome: immune escape and viral load. J Virol 2008, 82(13):6434-6446.
-
(2008)
J Virol
, vol.82
, Issue.13
, pp. 6434-6446
-
-
Rousseau, C.M.1
Daniels, M.G.2
Carlson, J.M.3
Kadie, C.4
Crawford, H.5
Prendergast, A.6
-
10
-
-
34248331317
-
Enhanced detection of human immunodeficiency virus type 1 (HIV-1) Nef-specific T cells recognizing multiple variants in early HIV-1 infection
-
Malhotra U., Li F., Nolin J., Allison M., Zhao H., Mullins J.I., et al. Enhanced detection of human immunodeficiency virus type 1 (HIV-1) Nef-specific T cells recognizing multiple variants in early HIV-1 infection. J Virol 2007, 81(10):5225-5237.
-
(2007)
J Virol
, vol.81
, Issue.10
, pp. 5225-5237
-
-
Malhotra, U.1
Li, F.2
Nolin, J.3
Allison, M.4
Zhao, H.5
Mullins, J.I.6
-
11
-
-
38449086859
-
Increased sequence diversity coverage improves detection of HIV-specific T cell responses
-
Frahm N., Kaufmann D.E., Yusim K., Muldoon M., Kesmir C., Linde C.H., et al. Increased sequence diversity coverage improves detection of HIV-specific T cell responses. J Immunol 2007, 179(10):6638-6650.
-
(2007)
J Immunol
, vol.179
, Issue.10
, pp. 6638-6650
-
-
Frahm, N.1
Kaufmann, D.E.2
Yusim, K.3
Muldoon, M.4
Kesmir, C.5
Linde, C.H.6
-
12
-
-
33846057692
-
Peptide selection for human immunodeficiency virus type 1 CTL-based vaccine evaluation
-
Li F., Malhotra U., Gilbert P.B., Hawkins N.R., Duerr A.C., McElrath J.M., et al. Peptide selection for human immunodeficiency virus type 1 CTL-based vaccine evaluation. Vaccine 2006, 24(47-48):6893-6904.
-
(2006)
Vaccine
, vol.24
, Issue.47-48
, pp. 6893-6904
-
-
Li, F.1
Malhotra, U.2
Gilbert, P.B.3
Hawkins, N.R.4
Duerr, A.C.5
McElrath, J.M.6
-
13
-
-
39849086635
-
Increased detection of HIV-specific T cell responses by combination of central sequences with comparable immunogenicity
-
Frahm N., Nickle D.C., Linde C.H., Cohen D.E., Zuñiga R., Lucchetti A., et al. Increased detection of HIV-specific T cell responses by combination of central sequences with comparable immunogenicity. AIDS 2008, 22(4):447-456.
-
(2008)
AIDS
, vol.22
, Issue.4
, pp. 447-456
-
-
Frahm, N.1
Nickle, D.C.2
Linde, C.H.3
Cohen, D.E.4
Zuñiga, R.5
Lucchetti, A.6
-
14
-
-
0002160179
-
The Western Australian HIV Cohort Study, Perth, Australia
-
Mallal S.A. The Western Australian HIV Cohort Study, Perth, Australia. J Acquir Immune Defic Syndr Hum Retrovirol 1998, 17(Suppl. 1):S23-S27.
-
(1998)
J Acquir Immune Defic Syndr Hum Retrovirol
, vol.17
, Issue.SUPPL. 1
-
-
Mallal, S.A.1
-
15
-
-
77952774582
-
Adaptive interactions between HLA and HIV-1: highly divergent selection imposed by HLA Class I molecules with common supertype motifs
-
John M., Heckerman D., James I., Park L.P., Carlson J.M., Chopra A., et al. Adaptive interactions between HLA and HIV-1: highly divergent selection imposed by HLA Class I molecules with common supertype motifs. J Immunol 2010, 184(8):4368-4377.
-
(2010)
J Immunol
, vol.184
, Issue.8
, pp. 4368-4377
-
-
John, M.1
Heckerman, D.2
James, I.3
Park, L.P.4
Carlson, J.M.5
Chopra, A.6
-
16
-
-
34547653712
-
Leveraging information across HLA alleles/supertypes improves epitope prediction
-
Heckerman D., Kadie C., Listgarten J. Leveraging information across HLA alleles/supertypes improves epitope prediction. J Comput Biol 2007, 14(6):736-746.
-
(2007)
J Comput Biol
, vol.14
, Issue.6
, pp. 736-746
-
-
Heckerman, D.1
Kadie, C.2
Listgarten, J.3
-
17
-
-
0004040193
-
-
Los Alamos National Laboratory, Theoretical Biology and Biophysics, Los Alamos, United States of America
-
Korber B.T.M., Brander C., Haynes B.F., Koup R., Moore J.P., Walker B.D., et al. HIV molecular immunology 2006/2007 2006/2007, Los Alamos National Laboratory, Theoretical Biology and Biophysics, Los Alamos, United States of America.
-
(2006)
HIV molecular immunology 2006/2007
-
-
Korber, B.T.M.1
Brander, C.2
Haynes, B.F.3
Koup, R.4
Moore, J.P.5
Walker, B.D.6
-
18
-
-
65049088939
-
Automation of the ELISpot assay for high-throughput detection of antigen-specific T-cell responses
-
Almeida C.A., Roberts S.G., Laird R., McKinnon E., Ahmed I., Pfafferott K., et al. Automation of the ELISpot assay for high-throughput detection of antigen-specific T-cell responses. J Immunol Methods 2009, 344(1):1-5.
-
(2009)
J Immunol Methods
, vol.344
, Issue.1
, pp. 1-5
-
-
Almeida, C.A.1
Roberts, S.G.2
Laird, R.3
McKinnon, E.4
Ahmed, I.5
Pfafferott, K.6
-
19
-
-
10744227803
-
Comparison of the ELISPOT and cytokine flow cytometry assays for the enumeration of antigen-specific T cells
-
Karlsson A.C., Martin J.N., Younger S.R., Bredt B.M., Epling L., Ronquillo R., et al. Comparison of the ELISPOT and cytokine flow cytometry assays for the enumeration of antigen-specific T cells. J Immunol Methods 2003, 283(1-2):141-153.
-
(2003)
J Immunol Methods
, vol.283
, Issue.1-2
, pp. 141-153
-
-
Karlsson, A.C.1
Martin, J.N.2
Younger, S.R.3
Bredt, B.M.4
Epling, L.5
Ronquillo, R.6
-
20
-
-
39649122106
-
HLA class I supertypes: a revised and updated classification
-
Sidney J., Peters B., Frahm N., Brander C., Sette A. HLA class I supertypes: a revised and updated classification. BMC Immunol 2008, 9:1.
-
(2008)
BMC Immunol
, vol.9
, pp. 1
-
-
Sidney, J.1
Peters, B.2
Frahm, N.3
Brander, C.4
Sette, A.5
-
21
-
-
10744226946
-
Consistent cytotoxic-T-lymphocyte targeting of immunodominant regions in human immunodeficiency virus across multiple ethnicities
-
Frahm N., Korber B.T., Adams C.M., Szinger J.J., Draenert R., Addo M.M., et al. Consistent cytotoxic-T-lymphocyte targeting of immunodominant regions in human immunodeficiency virus across multiple ethnicities. J Virol 2004, 78(5):2187-2200.
-
(2004)
J Virol
, vol.78
, Issue.5
, pp. 2187-2200
-
-
Frahm, N.1
Korber, B.T.2
Adams, C.M.3
Szinger, J.J.4
Draenert, R.5
Addo, M.M.6
-
22
-
-
4043176043
-
Comprehensive analysis of human immunodeficiency virus type 1-specific CD4 responses reveals marked immunodominance of gag and nef and the presence of broadly recognized peptides
-
Kaufmann D.E., Bailey P.M., Sidney J., Wagner B., Norris P.J., Johnston M.N., et al. Comprehensive analysis of human immunodeficiency virus type 1-specific CD4 responses reveals marked immunodominance of gag and nef and the presence of broadly recognized peptides. J Virol 2004, 78(9):4463-4477.
-
(2004)
J Virol
, vol.78
, Issue.9
, pp. 4463-4477
-
-
Kaufmann, D.E.1
Bailey, P.M.2
Sidney, J.3
Wagner, B.4
Norris, P.J.5
Johnston, M.N.6
-
23
-
-
40149105252
-
Magnitude, breadth, and functional profile of T-cell responses during human immunodeficiency virus primary infection with B and BF viral variants
-
Turk G., Gherardi M.M., Laufer N., Saracco M., Luzzi R., Cox J.H. Magnitude, breadth, and functional profile of T-cell responses during human immunodeficiency virus primary infection with B and BF viral variants. J Virol 2008, 82(6):2853-2866.
-
(2008)
J Virol
, vol.82
, Issue.6
, pp. 2853-2866
-
-
Turk, G.1
Gherardi, M.M.2
Laufer, N.3
Saracco, M.4
Luzzi, R.5
Cox, J.H.6
-
24
-
-
55949107366
-
Optimizing peptide matrices for identifying T-cell antigens
-
Precopio M.L., Butterfield T.R., Casazza J.P., Little S.J., Richman D.D., Koup R.A., et al. Optimizing peptide matrices for identifying T-cell antigens. Cytometry A 2008, 73(11):1071-1078.
-
(2008)
Cytometry A
, vol.73
, Issue.11
, pp. 1071-1078
-
-
Precopio, M.L.1
Butterfield, T.R.2
Casazza, J.P.3
Little, S.J.4
Richman, D.D.5
Koup, R.A.6
|