메뉴 건너뛰기




Volumn 7, Issue 3, 2010, Pages 472-480

Ontogene in biocreative II.5

Author keywords

BioCreative; Biomedical text mining; Natural Language Processing (NLP); protein interactions

Indexed keywords

BIOMEDICAL DOMAIN; BIOMEDICAL TEXT; NATURAL LANGUAGE PROCESSING; ORIGINAL SYSTEMS; PROTEIN INTERACTION; PROTEIN-PROTEIN INTERACTIONS; SCIENTIFIC LITERATURE; TEXT MINING;

EID: 77955450675     PISSN: 15455963     EISSN: None     Source Type: Journal    
DOI: 10.1109/TCBB.2010.50     Document Type: Article
Times cited : (52)

References (42)
  • 1
    • 33846041078 scopus 로고    scopus 로고
    • The universal protein resource (uniprot)
    • UniProt Consortium
    • UniProt Consortium, "The Universal Protein Resource (Uniprot)," Nucleic Acids Research, vol.35, pp. D193-D197, 2007.
    • (2007) Nucleic Acids Research , vol.35
  • 4
    • 33751111173 scopus 로고    scopus 로고
    • Text mining and its potential applications in systems biology
    • Dec.
    • S. Ananiadou, D.B. Kell, and J. Tsujii, "Text Mining and Its Potential Applications in Systems Biology," Trends in Biotechnology, vol.24, pp. 571-579, Dec. 2006.
    • (2006) Trends in Biotechnology , vol.24 , pp. 571-579
    • Ananiadou, S.1    Kell, D.B.2    Tsujii, J.3
  • 5
    • 33344468683 scopus 로고    scopus 로고
    • S. Ananiadou and J. McNaught, eds. Artech House Books
    • Text Mining for Biology and Biomedicine, S. Ananiadou and J. McNaught, eds. Artech House Books, 2006.
    • (2006) Text Mining for Biology and Biomedicine
  • 10
    • 33947368247 scopus 로고    scopus 로고
    • An environment for relation mining over richly annotated corpora: The case of genia
    • F. Rinaldi, G. Schneider, K. Kaljurand, M. Hess, and M. Romacker, "An Environment for Relation Mining over Richly Annotated Corpora: The Case of GENIA," BMC Bioinformatics, vol.7, suppl. 3, p. S3, 2006.
    • (2006) BMC Bioinformatics , vol.7 , Issue.SUPPL. 3
    • Rinaldi, F.1    Schneider, G.2    Kaljurand, K.3    Hess, M.4    Romacker, M.5
  • 12
    • 33847095048 scopus 로고    scopus 로고
    • Benchmarking natural-language parsers for biological applications using dependency graphs
    • A.B. Clegg and A.J. Shepherd, "Benchmarking Natural-Language Parsers for Biological Applications Using Dependency Graphs," BMC Bioinformatics, vol.8, p. 24, 2007.
    • (2007) BMC Bioinformatics , vol.8 , pp. 24
    • Clegg, A.B.1    Shepherd, A.J.2
  • 13
    • 33847294345 scopus 로고    scopus 로고
    • Relex-relation extraction using dependency parse trees
    • K. Fundel, R. Küffner, and R. Zimmer, "RelEx-Relation Extraction Using Dependency Parse Trees," Bioinformatics, vol.23, no.3 pp. 365-371, 2007.
    • (2007) Bioinformatics , vol.23 , Issue.3 , pp. 365-371
    • Fundel, K.1    Küffner, R.2    Zimmer, R.3
  • 14
    • 75849153303 scopus 로고    scopus 로고
    • The universal protein resource (uniprot) in 2010
    • The UniProt Consortium
    • The UniProt Consortium, "The Universal Protein Resource (UniProt) in 2010," Nucleic Acids Research, vol.38, suppl. 1, pp. D142-D148, 2010.
    • (2010) Nucleic Acids Research , vol.38 , Issue.SUPPL. 1
  • 15
    • 79958837534 scopus 로고    scopus 로고
    • Apr.
    • NCBI, "The NCBI Taxonomy Homepage," http://www.ncbi.nlm. nih.gov/Taxonomy/, Apr. 2010.
    • (2010) The NCBI Taxonomy Homepage
  • 16
    • 77955440847 scopus 로고    scopus 로고
    • HUPO Proteomics Standards Initiative. Apr.
    • HUPO Proteomics Standards Initiative, "PSI-MI," http://psidev. sourceforge.net/mi/psi-mi.obo, Apr. 2010.
    • (2010) PSI-MI
  • 17
    • 77955433443 scopus 로고    scopus 로고
    • University of Michigan Medical School. Apr.
    • University of Michigan Medical School, "Cell Line Knowledge Base," http://clkb.ncbi.org, Apr. 2010.
    • (2010) Cell Line Knowledge Base
  • 19
    • 77955457585 scopus 로고    scopus 로고
    • Apr.
    • Alias-i, "Lingpipe," http://alias-i.com/lingpipe, Apr. 2010.
    • (2010) Lingpipe
  • 22
    • 49549095524 scopus 로고    scopus 로고
    • Gene mention normalization and interaction extraction with context models and sentence motifs
    • J. Hakenberg, C. Plake, L. Royer, H. Strobelt, U. Leser, and M. Schroeder, "Gene Mention Normalization and Interaction Extraction with Context Models and Sentence Motifs," Genome Biology, vol.9, suppl. 2, p. S14, 2008.
    • (2008) Genome Biology , vol.9 , Issue.SUPPL. 2
    • Hakenberg, J.1    Plake, C.2    Royer, L.3    Strobelt, H.4    Leser, U.5    Schroeder, M.6
  • 23
    • 56649083754 scopus 로고    scopus 로고
    • Distinguishing the species of biomedical named entities for term identification
    • X. Wang and M. Matthews, "Distinguishing the Species of Biomedical Named Entities for Term Identification," BMC Bioinformatics, vol.9, suppl. 11, p. S6, 2008.
    • (2008) BMC Bioinformatics , vol.9 , Issue.SUPPL.11
    • Wang, X.1    Matthews, M.2
  • 24
    • 0036678776 scopus 로고    scopus 로고
    • Tagging gene and protein names in biomedical text
    • L. Tanabe and W.J. Wilbur, "Tagging Gene and Protein Names in Biomedical Text," Bioinformatics, vol.18, no.8, pp. 1124-1132, 2002.
    • (2002) Bioinformatics , vol.18 , Issue.8 , pp. 1124-1132
    • Tanabe, L.1    Wilbur, W.J.2
  • 27
    • 51049088875 scopus 로고    scopus 로고
    • Overview of the protein-protein interaction annotation extraction task of biocreative II
    • M. Krallinger, F. Leitner, C. Rodriguez-Penagos, and A. Valencia, "Overview of the Protein-Protein Interaction Annotation Extraction Task of BioCreative II," Genome Biology, vol.9, suppl. 2, p. S4, 2008.
    • (2008) Genome Biology , vol.9 , Issue.SUPPL. 2
    • Krallinger, M.1    Leitner, F.2    Rodriguez-Penagos, C.3    Valencia, A.4
  • 30
    • 4944229711 scopus 로고    scopus 로고
    • Genia corpus-semantically annotated corpus for bio-textmining
    • J.D. Kim, T. Ohta, Y. Tateisi, and J. Tsujii, "GENIA Corpus-Semantically Annotated Corpus for Bio-Textmining," Bioinformatics, vol.19, suppl. 1, pp. i180-i182, 2003.
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL.1
    • Kim, J.D.1    Ohta, T.2    Tateisi, Y.3    Tsujii, J.4
  • 34
    • 37549050918 scopus 로고    scopus 로고
    • Kernel approaches for genic interaction extraction
    • S. Kim, J. Yoon, and J. Yang, "Kernel Approaches for Genic Interaction Extraction," Bioinformatics, vol.24, no.1, pp. 118-126, 2008.
    • (2008) Bioinformatics , vol.24 , Issue.1 , pp. 118-126
    • Kim, S.1    Yoon, J.2    Yang, J.3
  • 38
    • 4043082208 scopus 로고    scopus 로고
    • Head-driven statistical models for natural language parsing
    • M. Collins, "Head-Driven Statistical Models for Natural Language Parsing," Computational Linguistics, vol.29, pp. 589-637, 2003.
    • (2003) Computational Linguistics , vol.29 , pp. 589-637
    • Collins, M.1
  • 39
    • 0023312404 scopus 로고
    • Estimation of probabilities from sparse data for the language model com-ponent of a speech recogniser
    • Mar.
    • S. Katz, "Estimation of Probabilities from Sparse Data for the Language Model Com-Ponent of a Speech Recogniser," IEEE Trans. Acoustics, Speech, and Signal Processing, vol.ASSP-35, no.3, pp. 400-401, Mar. 1987.
    • (1987) IEEE Trans. Acoustics, Speech, and Signal Processing , vol.ASSP-35 , Issue.3 , pp. 400-401
    • Katz, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.