메뉴 건너뛰기




Volumn 266, Issue 4, 2010, Pages 536-549

On the stability of metabolic cycles

Author keywords

Autocatalytic cycles; Metabolic networks; Structural kinetic modeling

Indexed keywords

ANALYTICAL METHOD; EVOLUTIONARY BIOLOGY; HYPOTHESIS TESTING; METABOLISM; MODELING;

EID: 77955298900     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2010.07.023     Document Type: Article
Times cited : (31)

References (25)
  • 1
  • 2
    • 72049099058 scopus 로고    scopus 로고
    • Graph theoretic criteria to injectivity in chemical reaction systems
    • Banaji M., Craciun G. Graph theoretic criteria to injectivity in chemical reaction systems. Advances in Applied Mathematics 2010, 44:168-184.
    • (2010) Advances in Applied Mathematics , vol.44 , pp. 168-184
    • Banaji, M.1    Craciun, G.2
  • 3
    • 67651245842 scopus 로고    scopus 로고
    • An examination of the role of autocatalytic cycles in the chemistry of proposed primordial reactions
    • Blackmond D. An examination of the role of autocatalytic cycles in the chemistry of proposed primordial reactions. Angewandte Chemie 2009, 121:392-396.
    • (2009) Angewandte Chemie , vol.121 , pp. 392-396
    • Blackmond, D.1
  • 5
    • 27844475135 scopus 로고    scopus 로고
    • Multiple equilibria in complex chemical reaction networks: 1. The injectivity property
    • Craciun G., Feinberg M. Multiple equilibria in complex chemical reaction networks: 1. The injectivity property. SIAM Journal of Applied Mathematics 2005, 65:1526-1546.
    • (2005) SIAM Journal of Applied Mathematics , vol.65 , pp. 1526-1546
    • Craciun, G.1    Feinberg, M.2
  • 6
    • 2942579562 scopus 로고    scopus 로고
    • Metabolic flux balance analysis and the in silico analysis of Escherichia coli k-12 gene deletions
    • Edwards J., Palsson B. Metabolic flux balance analysis and the in silico analysis of Escherichia coli k-12 gene deletions. BMC Bioinformatics 2000, 1:1.
    • (2000) BMC Bioinformatics , vol.1 , pp. 1
    • Edwards, J.1    Palsson, B.2
  • 9
    • 0023531427 scopus 로고
    • Chemical reaction network structure and the stability of complex isothermal reactors-1 the deficiency zero and deficiency one theorems
    • Feinberg M. Chemical reaction network structure and the stability of complex isothermal reactors-1 the deficiency zero and deficiency one theorems. Chemical Engineering Science 1987, 42:2229-2268.
    • (1987) Chemical Engineering Science , vol.42 , pp. 2229-2268
    • Feinberg, M.1
  • 10
    • 0026802334 scopus 로고
    • Metabolic control analysis: a survey of its theoretical and experimental development
    • Fell D.A. Metabolic control analysis: a survey of its theoretical and experimental development. Biochemical Journal 1992, 286(Part 2):313-330.
    • (1992) Biochemical Journal , vol.286 , Issue.PART 2 , pp. 313-330
    • Fell, D.A.1
  • 12
    • 36248952170 scopus 로고    scopus 로고
    • The stability and robustness of metabolic states: identifying stabilizing sites in metabolic networks
    • Grimbs S., Selbig J., Bulik S., Holzhutter H., Steuer R. The stability and robustness of metabolic states: identifying stabilizing sites in metabolic networks. Molecular Systems Biology 2007, 3:146.
    • (2007) Molecular Systems Biology , vol.3 , pp. 146
    • Grimbs, S.1    Selbig, J.2    Bulik, S.3    Holzhutter, H.4    Steuer, R.5
  • 13
    • 32844460213 scopus 로고    scopus 로고
    • Generalized models as a universal approach to the analysis of nonlinear dynamical systems
    • Gross T., Feudel U. Generalized models as a universal approach to the analysis of nonlinear dynamical systems. Physical Review E 2006, 73:16205-16214.
    • (2006) Physical Review E , vol.73 , pp. 16205-16214
    • Gross, T.1    Feudel, U.2
  • 16
    • 34247609189 scopus 로고    scopus 로고
    • Inverse bifurcation analysis: application to simple gene systems
    • Lu J., Engl H., Schuster P. Inverse bifurcation analysis: application to simple gene systems. Algorithms for Molecular Biology 2006, 1(1):11.
    • (2006) Algorithms for Molecular Biology , vol.1 , Issue.1 , pp. 11
    • Lu, J.1    Engl, H.2    Schuster, P.3
  • 18
    • 38949186487 scopus 로고    scopus 로고
    • The implausibility of metabolic cycles on the prebiotic earth
    • Orgel L. The implausibility of metabolic cycles on the prebiotic earth. PLoS Biology 2008, 6:5-13.
    • (2008) PLoS Biology , vol.6 , pp. 5-13
    • Orgel, L.1
  • 20
    • 34548530660 scopus 로고    scopus 로고
    • Monotone and near-monotone biochemical networks
    • Sontag E. Monotone and near-monotone biochemical networks. Systems and Synthetic Biology 2007, 1:59-87.
    • (2007) Systems and Synthetic Biology , vol.1 , pp. 59-87
    • Sontag, E.1
  • 21
    • 70350672602 scopus 로고    scopus 로고
    • Ernest: a toolbox for chemical reaction network theory
    • Soranzo N., Altafini C. Ernest: a toolbox for chemical reaction network theory. Bioinformatics 2009, 25:2853-2854.
    • (2009) Bioinformatics , vol.25 , pp. 2853-2854
    • Soranzo, N.1    Altafini, C.2
  • 23
    • 34447314196 scopus 로고    scopus 로고
    • From structure to dynamics of metabolic pathways: applications to the plant mitochondrial TCA cycle
    • Steuer R., Nesi A., Fernie A., Gross T., Blasius B., Selbig J. From structure to dynamics of metabolic pathways: applications to the plant mitochondrial TCA cycle. Bioinformatics 2007, 23:1378-1385.
    • (2007) Bioinformatics , vol.23 , pp. 1378-1385
    • Steuer, R.1    Nesi, A.2    Fernie, A.3    Gross, T.4    Blasius, B.5    Selbig, J.6
  • 24
    • 33748853173 scopus 로고    scopus 로고
    • Evolutionary potentials and minimal requirements for protocells
    • Szathmary E., Santos M., Fernando C. Evolutionary potentials and minimal requirements for protocells. Topics in Current Chemistry 2005, 259:167-211.
    • (2005) Topics in Current Chemistry , vol.259 , pp. 167-211
    • Szathmary, E.1    Santos, M.2    Fernando, C.3
  • 25
    • 77956443560 scopus 로고
    • The Dynamics of Feedback Control Circuits in Biochemical Pathways. Progress in Theoretical Biology, Academic Press
    • Tyson, J., Othmer, H., 1978. The Dynamics of Feedback Control Circuits in Biochemical Pathways. Progress in Theoretical Biology, vol. 5. Academic Press.
    • (1978) , vol.5
    • Tyson, J.1    Othmer, H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.