The possible involvement of copper-containing nitrite reductase (NirK) and flavohemoglobin in denitrification by the fungus Cylindrocarpon tonkinense

Bioscience, Biotechnology and Biochemistry

Volumn 74, Issue 7, 2010, Pages 1403-1407

  Kim, Sang Wan ^a   Fushinobu, Shinya ^a   Zhou, Shengmin ^a   Wakagi, Takayoshi ^a   Shoun, Hirofumi ^a  

^a UNIVERSITY OF TOKYO   (Japan)

Author keywords

Copper containing nitrite reductase; Cytochrome P450 nitric oxide reductase; Flavohemoglobin; Fungal denitrification; Suppression subtraction hybridization

Indexed keywords

CYTOCHROME P450; FUNGAL DENITRIFICATION; NITRIC OXIDE REDUCTASE; NITRITE REDUCTASE; SUPPRESSION SUBTRACTION HYBRIDIZATION;

COPPER; GENE EXPRESSION; NITRIC OXIDE;

DENITRIFICATION;

COPPER; FUNGAL PROTEIN; NITRITE REDUCTASE;

ARTICLE; CHEMISTRY; DNA SEQUENCE; ENZYMOLOGY; FUSARIUM; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; MOLECULAR CLONING;

CLONING, MOLECULAR; COPPER; FUNGAL PROTEINS; FUSARIUM; GENE EXPRESSION REGULATION, FUNGAL; NITRITE REDUCTASES; SEQUENCE ANALYSIS, DNA;

CYLINDROCARPON; EUKARYOTA; FUNGI; FUSARIUM LICHENICOLA;

EID: 77955208664     PISSN: 09168451     EISSN: 13476947     Source Type: Journal    
DOI: 10.1271/bbb.100071     Document Type: Article

References (33)

1. Zumft WG, Microbiol. Mol. Biol. Rev., 61, 533-616 (1997).
2. Finlay BJ, Span ASW, and Harman JMP, Nature, 303, 333-336 (1983).
3. Shoun H and Tanimoto T, J. Biol. Chem., 266, 11078-11082 (1991).
4. Shoun H, Kim DH, Uchiyama H, and Sugiyama J, FEMS Microbiol. Lett., 73, 277-281 (1992).
5. Tanimoto T, Hatano K, Kim DH, Uchiyama H, and Shoun H, FEMS Microbiol. Lett., 93, 177-180 (1992).
6. Risgaard-Petersen N, Langezaal AM, Ingvardsen S, Schmid MC, Jetten MSM, Op den Camp HJM, Derksen JWM, Pina-Ochoa E, Eriksson SP, Nielsen LP, Revsbech NP, Cedhagen T, and van der Zwaan GJ, Nature, 443, 93-96 (2006).
7. Kobayashi M, Matsuo Y, Takimoto A, Suzuki S, Maruo F, and Shoun H, J. Biol. Chem., 271, 16263-16267 (1996).
8. Takaya N, Kuwazaki S, Adachi Y, Suzuki S, Kikuchi T, Nakamura H, Shiro Y, and Shoun H, J. Biochem. (Tokyo), 133, 461-465 (2003).
9. Nakahara K, Tanimoto T, Hatano K, Usuda K, and Shoun H, J. Biol. Chem., 268, 8350-8355 (1993).
10. Uchimura H, Enjoji H, Seki T, Taguchi A, Takaya N, and Shoun H, J. Biochem. (Tokyo), 131, 579-586 (2002).
11. Kobayashi M and Shoun H, J. Biol. Chem., 270, 4146-4151 (1995).
12. Kizawa H, Tomura D, Oda M, Fukamizu A, Hoshino T, Gotoh O, Yasui T, and Shoun H, J. Biol. Chem., 266, 10632-10637 (1991).
13. Takaya N, J. Biosci. Bioeng., 94, 506-510 (2002).
14. Zhang L, Kudo T, Takaya N, and Shoun H, J. Biol. Chem., 277, 33842-33847 (2002).
15. Usuda K, Toritsuka N, Matsuo Y, Kim DH, and Shoun H, Appl. Environ. Microbiol., 61, 883-889 (1995).
16. Watsuji TO, Takaya N, Nakamura A, and Shoun H, Biosci. Biotechnol. Biochem., 67, 1115-1120 (2003).
17. Kubota Y, Takaya N, and Shoun H, Arch. Microbiol., 171, 210-213 (1999).
18. Kim SW, Fushinobu S, Zhou S, Wakagi T, and Shoun H, Appl. Environ. Microbiol., 75, 2652-2658 (2009).
19. Diatchenko L, Lau YF, Campbell AP, Chenchik A, Moqadam F, Huang B, Lukyanov S, Lukyanov K, Gurskaya N, Sverdlov ED, and Siebert PD, Proc. Natl. Acad. Sci. USA, 93, 6025-6030 (1996).
20. Rebrikov DV, Britanova OV, Gurskaya NG, Lukyanov KA, Tarabykin VS, and Lukyanov SA, Nucleic Acids Res., 28, E90 (2000).
21. Boengler K, Pipp F, Schaper W, and Deindl E, Lab. Invest., 83, 759-761 (2003).
22. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, and Lipman DJ, Nucleic Acids Res., 25, 3389-3402 (1997).
23. Kudo T, Tomura D, Liu DL, Dai XQ, and Shoun H, Biochimie, 78, 792-799 (1996).
24. Watsuji TO, Takaya N, Nakamura A, and Shoun H, Biosci. Biotechnol. Biochem., 67, 1109-1114 (2003).
25. Iijima M, Shimizu H, Tanaka Y, and Urushihara H, Cell Struct. Funct., 25, 47-55 (2000).
26. Ullmann BD, Myers H, Chiranand W, Lazzell AL, Zhao Q, Vega LA, Lopez-Ribot JL, Gardner PR, and Gustin MC, Eukaryot. Cell, 3, 715-723 (2004).
27. Zhou SM, Fushinobu S, Nakanishi Y, Kim SW, Wakagi T, and Shoun H, Biochem. Biophys. Res. Commun., 381, 7-11 (2009).
28. Membrillo-Hernandez J, Coopamah MD, Anjum MF, Stevanin TM, Kelly A, Hughes MN, and Poole RK, J. Biol. Chem., 274, 748-754 (1999).
29. Moore CM, Nakano MM, Wang T, Ye RW, and Helmann JD, J. Bacteriol., 186, 4655-4664 (2004).
30. Zhou Z, Takaya N, Sakairi MA, and Shoun H, Arch. Microbiol., 175, 19-25 (2001).
31. Berks BC, Ferguson SJ, Moir JW, and Richardson DJ, Biochim. Biophys. Acta, 1232, 97-173 (1995).
32. Kuwazaki S, Takaya N, Nakamura A, and Shoun H, Biosci. Biotechnol. Biochem., 67, 937-939 (2003).
33. Akhmanova A, Voncken FGJ, Hosea KM, Harhangi H, Keltjens JT, den Camp HJMO, Vogels GD, and Hackstein JHP, Mol. Microbiol., 32, 1103-1114 (1999).