메뉴 건너뛰기




Volumn 16, Issue 8, 2010, Pages 601-616

Providing a stable methodological basis for comparing transcript abundance of developing embryos using microarrays

Author keywords

Bovine; Embryo; Microarray; MRna; Oocyte

Indexed keywords

MESSENGER RNA; POLYADENYLIC ACID;

EID: 77955127767     PISSN: 13609947     EISSN: 14602407     Source Type: Journal    
DOI: 10.1093/molehr/gaq038     Document Type: Article
Times cited : (22)

References (41)
  • 2
    • 0026747759 scopus 로고
    • A maternal tail of poly(A): the long and the short of it
    • Bachvarova RF. A maternal tail of poly(A): the long and the short of it. Cell 1992;69:895-897.
    • (1992) Cell , vol.69 , pp. 895-897
    • Bachvarova, R.F.1
  • 3
    • 0021845254 scopus 로고
    • Changes in total RNA, polyadenylated RNA, and actin mRNA during meiotic maturation of mouse oocytes
    • Bachvarova R, De Leon V, Johnson A, Kaplan G, Paynton BV. Changes in total RNA, polyadenylated RNA, and actin mRNA during meiotic maturation of mouse oocytes. Dev Biol 1985;108:325-331.
    • (1985) Dev Biol , vol.108 , pp. 325-331
    • Bachvarova, R.1    De Leon, V.2    Johnson, A.3    Kaplan, G.4    Paynton, B.V.5
  • 5
    • 0023874053 scopus 로고
    • Human gene expression first occurs between the four-and eight-cell stages of preimplantation development
    • Braude P, Bolton V, Moore S. Human gene expression first occurs between the four-and eight-cell stages of preimplantation development. Nature 1988;332:459-461.
    • (1988) Nature , vol.332 , pp. 459-461
    • Braude, P.1    Bolton, V.2    Moore, S.3
  • 6
    • 84984932472 scopus 로고    scopus 로고
    • Exploring the new world of the genome with DNA microarrays
    • Brown PO, Botstein D. Exploring the new world of the genome with DNA microarrays. Nat Genet 1999;21(Suppl.):33-37.
    • (1999) Nat Genet , vol.21 , Issue.SUPPL , pp. 33-37
    • Brown, P.O.1    Botstein, D.2
  • 9
    • 0031037865 scopus 로고    scopus 로고
    • Nucleus ultrastructure and transcriptional activity of bovine oocytes in preantral and early antral follicles
    • Fair T, Hulshof SC, Hyttel P, Greve T, Boland M. Nucleus ultrastructure and transcriptional activity of bovine oocytes in preantral and early antral follicles. Mol Reprod Dev 1997;46:208-215.
    • (1997) Mol Reprod Dev , vol.46 , pp. 208-215
    • Fair, T.1    Hulshof, S.C.2    Hyttel, P.3    Greve, T.4    Boland, M.5
  • 10
    • 65849492419 scopus 로고    scopus 로고
    • Real-time monitoring of aRNA production during T7 amplification to prevent the loss of sample representation during microarray hybridization sample preparation
    • Gilbert I, Scantland S, Dufort I, Gordynska O, Labbe A, Sirard MA, Robert C. Real-time monitoring of aRNA production during T7 amplification to prevent the loss of sample representation during microarray hybridization sample preparation. Nucleic Acids Res 2009a; 37:e65.
    • (2009) Nucleic Acids Res , vol.37
    • Gilbert, I.1    Scantland, S.2    Dufort, I.3    Gordynska, O.4    Labbe, A.5    Sirard, M.A.6    Robert, C.7
  • 12
    • 34547431071 scopus 로고    scopus 로고
    • Evaluation of small sample cDNA amplification for microdissected airway expression profiling in COPD
    • Gosselink JV, Hayashi S, Chau E, Cooper J, Elliott WM, Hogg JC. Evaluation of small sample cDNA amplification for microdissected airway expression profiling in COPD. COPD 2007;4:91-105.
    • (2007) COPD , vol.4 , pp. 91-105
    • Gosselink, J.V.1    Hayashi, S.2    Chau, E.3    Cooper, J.4    Elliott, W.M.5    Hogg, J.C.6
  • 13
    • 0347763875 scopus 로고    scopus 로고
    • Dynamics of global gene expression changes during mouse preimplantation development
    • Hamatani T, Carter MG, Sharov AA, Ko MS. Dynamics of global gene expression changes during mouse preimplantation development. Dev Cell 2004;6:117-131.
    • (2004) Dev Cell , vol.6 , pp. 117-131
    • Hamatani, T.1    Carter, M.G.2    Sharov, A.A.3    Ko, M.S.4
  • 16
    • 34447298590 scopus 로고    scopus 로고
    • Optimization of oligonucleotide microarray fabricated by spotting 65-mer
    • Lee M, Trent JM, Bittner ML. Optimization of oligonucleotide microarray fabricated by spotting 65-mer. Anal Biochem 2007;368:61-69.
    • (2007) Anal Biochem , vol.368 , pp. 61-69
    • Lee, M.1    Trent, J.M.2    Bittner, M.L.3
  • 19
    • 0031829142 scopus 로고    scopus 로고
    • Onset of transcription in bovine oocytes and preimplantation embryos
    • Memili E, Dominko T, First NL. Onset of transcription in bovine oocytes and preimplantation embryos. Mol Reprod Dev 1998;51:36-41.
    • (1998) Mol Reprod Dev , vol.51 , pp. 36-41
    • Memili, E.1    Dominko, T.2    First, N.L.3
  • 24
    • 0032433721 scopus 로고    scopus 로고
    • RNA-binding proteins in mouse oocytes and embryos: expression of genes encoding Y box, DEAD box RNA helicase, and polyA binding proteins
    • Paynton BV. RNA-binding proteins in mouse oocytes and embryos: expression of genes encoding Y box, DEAD box RNA helicase, and polyA binding proteins. Dev Genet 1998;23:285-298.
    • (1998) Dev Genet , vol.23 , pp. 285-298
    • Paynton, B.V.1
  • 25
    • 0028343765 scopus 로고
    • Polyadenylation and deadenylation of maternal mRNAs during oocyte growth and maturation in the mouse
    • Paynton BV, Bachvarova R. Polyadenylation and deadenylation of maternal mRNAs during oocyte growth and maturation in the mouse. Mol Reprod Dev 1994;37:172-180.
    • (1994) Mol Reprod Dev , vol.37 , pp. 172-180
    • Paynton, B.V.1    Bachvarova, R.2
  • 26
    • 0034653961 scopus 로고    scopus 로고
    • Use of cDNA microarrays to probe and understand the toxicological consequences of altered gene expression
    • Pennie WD. Use of cDNA microarrays to probe and understand the toxicological consequences of altered gene expression. Toxicol Lett 2000;112-113:473-477.
    • (2000) Toxicol Lett , vol.112-113 , pp. 473-477
    • Pennie, W.D.1
  • 27
    • 0021006238 scopus 로고
    • The legacy from the oocyte and its role in controlling early development of the mouse embryo
    • Pratt HP, Bolton VN, Gudgeon KA. The legacy from the oocyte and its role in controlling early development of the mouse embryo. Ciba Found Symp 1983;98:197-227.
    • (1983) Ciba Found Symp , vol.98 , pp. 197-227
    • Pratt, H.P.1    Bolton, V.N.2    Gudgeon, K.A.3
  • 28
    • 0036281003 scopus 로고    scopus 로고
    • RNA amplification results in reproducible microarray data with slight ratio bias
    • Puskas LG, Zvara A, Hackler L Jr, Van Hummelen P. RNA amplification results in reproducible microarray data with slight ratio bias. Biotechniques 2002;32:1330-1340.
    • (2002) Biotechniques , vol.32 , pp. 1330-1340
    • Puskas, L.G.1    Zvara, A.2    Hackler L. Jr3    Van Hummelen, P.4
  • 29
    • 0027646128 scopus 로고
    • Regulation of zygotic gene activation in the mouse
    • Schultz RM. Regulation of zygotic gene activation in the mouse. Bioessays 1993;15:531-538.
    • (1993) Bioessays , vol.15 , pp. 531-538
    • Schultz, R.M.1
  • 31
    • 33745025941 scopus 로고    scopus 로고
    • Comparative evaluation of linear and exponential amplification techniques for expression profiling at the single-cell level
    • Subkhankulova T, Livesey FJ. Comparative evaluation of linear and exponential amplification techniques for expression profiling at the single-cell level. Genome Biol 2006;7:R18.
    • (2006) Genome Biol , vol.7
    • Subkhankulova, T.1    Livesey, F.J.2
  • 32
    • 33745083376 scopus 로고    scopus 로고
    • Cross-species hybridizations on a multi-species cDNA microarray to identify evolutionarily conserved genes expressed in oocytes
    • Vallee M, Robert C, Methot S, Palin MF, Sirard MA. Cross-species hybridizations on a multi-species cDNA microarray to identify evolutionarily conserved genes expressed in oocytes. BMC Genomics 2006;7:113.
    • (2006) BMC Genomics , vol.7 , pp. 113
    • Vallee, M.1    Robert, C.2    Methot, S.3    Palin, M.F.4    Sirard, M.A.5
  • 35
    • 34247583289 scopus 로고    scopus 로고
    • Using the histone H2a transcript as an endogenous standard to study relative transcript abundance during bovine early development
    • Vigneault C, Gilbert I, Sirard MA, Robert C. Using the histone H2a transcript as an endogenous standard to study relative transcript abundance during bovine early development. Mol Reprod Dev 2007; 74:703-715.
    • (2007) Mol Reprod Dev , vol.74 , pp. 703-715
    • Vigneault, C.1    Gilbert, I.2    Sirard, M.A.3    Robert, C.4
  • 36
    • 2642549853 scopus 로고    scopus 로고
    • Transcription factor expression patterns in bovine in vitro-derived embryos prior to maternal-zygotic transition
    • Vigneault C, McGraw S, Massicotte L, Sirard MA. Transcription factor expression patterns in bovine in vitro-derived embryos prior to maternal-zygotic transition. Biol Reprod 2004;70:1701-1709.
    • (2004) Biol Reprod , vol.70 , pp. 1701-1709
    • Vigneault, C.1    McGraw, S.2    Massicotte, L.3    Sirard, M.A.4
  • 37
    • 0034065808 scopus 로고    scopus 로고
    • Translation of maternal messenger ribonucleic acids encoding transcription factors during genome activation in early mouse embryos
    • Wang Q, Latham KE. Translation of maternal messenger ribonucleic acids encoding transcription factors during genome activation in early mouse embryos. Biol Reprod 2000;62:969-978.
    • (2000) Biol Reprod , vol.62 , pp. 969-978
    • Wang, Q.1    Latham, K.E.2
  • 38
    • 0025302185 scopus 로고
    • In the beginning is the end: regulation of poly(A) addition and removal during early development
    • Wickens M. In the beginning is the end: regulation of poly(A) addition and removal during early development. Trends Biochem Sci 1990;15:320-324.
    • (1990) Trends Biochem Sci , vol.15 , pp. 320-324
    • Wickens, M.1
  • 39
    • 33646938983 scopus 로고    scopus 로고
    • Systematic comparison of the T7-IVT and SMART-based RNA preamplification techniques for DNA microarray experiments
    • Wilhelm J, Muyal JP, Best J, Kwapiszewska G, Stein MM, Seeger W, Bohle RM, Fink L. Systematic comparison of the T7-IVT and SMART-based RNA preamplification techniques for DNA microarray experiments. Clin Chem 2006;52:1161-1167.
    • (2006) Clin Chem , vol.52 , pp. 1161-1167
    • Wilhelm, J.1    Muyal, J.P.2    Best, J.3    Kwapiszewska, G.4    Stein, M.M.5    Seeger, W.6    Bohle, R.M.7    Fink, L.8
  • 41
    • 29344457601 scopus 로고    scopus 로고
    • An evaluation of linear RNA amplification in cDNA microarray gene expression analysis
    • Zhu B, Xu F, Baba Y. An evaluation of linear RNA amplification in cDNA microarray gene expression analysis. Mol Genet Metab 2006; 87:71-79.
    • (2006) Mol Genet Metab , vol.87 , pp. 71-79
    • Zhu, B.1    Xu, F.2    Baba, Y.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.