-
1
-
-
0037445316
-
Composition and diversity of ammonia-oxidizing bacterial communities in wastewater treatment reactors of different design treating identical wastewater
-
Arlene, K. R., J. R. Snape, D. Fearnside, M. R. Barer, T. P. Curtis, and I. M. Head. 2003. Composition and diversity of ammonia-oxidizing bacterial communities in wastewater treatment reactors of different design treating identical wastewater. FEMS Microbiol. Ecol. 43: 195-206.
-
(2003)
FEMS Microbiol. Ecol
, vol.43
, pp. 195-206
-
-
Arlene, K.R.1
Snape, J.R.2
Fearnside, D.3
Barer, M.R.4
Curtis, T.P.5
Head, I.M.6
-
2
-
-
0037641131
-
Detection and enumeration of aromatic oxygenase genes by multiplex and real-time PCR
-
Baldwin, B., C. H. Nakatsu, and L. Nies. 2003. Detection and enumeration of aromatic oxygenase genes by multiplex and real-time PCR. Appl. Environ. Microbiol. 69: 3350-3358.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 3350-3358
-
-
Baldwin, B.1
Nakatsu, C.H.2
Nies, L.3
-
3
-
-
0036202170
-
Evaluation of nested PCR-DGGE (denaturing gradient gel electrophoresis) with group-specific 16S rRNA primers for the analysis of bacterial communities from different wastewater treatment plants
-
Boon, N., W. D. Windt, W. Verstraete, and E. M. Top. 2002. Evaluation of nested PCR-DGGE (denaturing gradient gel electrophoresis) with group-specific 16S rRNA primers for the analysis of bacterial communities from different wastewater treatment plants. FEMS Microbiol. Ecol. 39: 101-112.
-
(2002)
FEMS Microbiol. Ecol
, vol.39
, pp. 101-112
-
-
Boon, N.1
Windt, W.D.2
Verstraete, W.3
Top, E.M.4
-
4
-
-
0031803542
-
The comparison of the diversity of activated sludge plants
-
Curtis, T. P. and N. G. Craine. 1998. The comparison of the diversity of activated sludge plants. Water Sci. Technol. 37: 7178.
-
(1998)
Water Sci. Technol
, vol.37
, pp. 7178
-
-
Curtis, T.P.1
Craine, N.G.2
-
5
-
-
0242657579
-
Power analysis for real-time PCR quantification of genes in activated sludge and analysis of the variability introduced by DNA extraction
-
Dionisi, H. M., G. Hamrs, A. C. Layton, I. R. Gregory, J. Parker, S. A. Hawkins, K. G. Robinson, and G. S. Sayler. 2003. Power analysis for real-time PCR quantification of genes in activated sludge and analysis of the variability introduced by DNA extraction. Appl. Environ. Microbiol. 69: 6597-6604.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 6597-6604
-
-
Dionisi, H.M.1
Hamrs, G.2
Layton, A.C.3
Gregory, I.R.4
Parker, J.5
Hawkins, S.A.6
Robinson, K.G.7
Sayler, G.S.8
-
6
-
-
0037439040
-
Real-time PCR quantification of nitrifying bacteria in a municipal wastewater treatment plant
-
Harms, G., A. C. Layton, H. M. Dionisi, I. R. Garrett, S. A. Hawkins, K. G. Robinson, and G. Sayler. 2003 Real-time PCR quantification of nitrifying bacteria in a municipal wastewater treatment plant. Environ. Sci. Technol. 37: 343-351.
-
(2003)
Environ. Sci. Technol
, vol.37
, pp. 343-351
-
-
Harms, G.1
Layton, A.C.2
Dionisi, H.M.3
Garrett, I.R.4
Hawkins, S.A.5
Robinson, K.G.6
Sayler, G.7
-
7
-
-
0029957181
-
Real-time quantitative PCR
-
Heid, C. A., J. Stevens, K. J. Livak, and P. M. Williams. 1996 Real-time quantitative PCR. Gen. Res. 6: 986-994.
-
(1996)
Gen. Res
, vol.6
, pp. 986-994
-
-
Heid, C.A.1
Stevens, J.2
Livak, K.J.3
Williams, P.M.4
-
8
-
-
0032147190
-
Combined molecular and conventional analyses of nitrifying bacterium diversity in activated sludge: Nitrosococcus mobilis and Nitrospira-like bacteria as dominant populations
-
Juretschko, S., G. Timmermann, M. Schmid, K. Scheifer, A. Pommerening-Roser, H. Koops, and M. Wagner. 1998. Combined molecular and conventional analyses of nitrifying bacterium diversity in activated sludge: Nitrosococcus mobilis and Nitrospira-like bacteria as dominant populations. Appl. Environ. Microbiol. 64: 3042-3051.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 3042-3051
-
-
Juretschko, S.1
Timmermann, G.2
Schmid, M.3
Scheifer, K.4
Pommerening-Roser, A.5
Koops, H.6
Wagner, M.7
-
9
-
-
0030901922
-
Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments
-
Kowalchuk, G. A., J. R. Stephen, W. de Boer, J. I. Prosser, T. M. Embley, and J. W. Woldendorp. 1997. Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments. Appl. Environ. Microbiol. 63:1489-1497.
-
(1997)
Appl. Environ. Microbiol
, vol.63
, pp. 1489-1497
-
-
Kowalchuk, G.A.1
Stephen, J.R.2
de Boer, W.3
Prosser, J.I.4
Embley, T.M.5
Woldendorp, J.W.6
-
10
-
-
13544254298
-
Emergence of competitive dominant ammonia-oxidizing bacterial populations in a full-scale industrial wastewater treatment plant
-
Layton, A. C., H. M. Dionisi, H. W. Kuo, K. G. Robinson, V. M. Garrett, A. Meyers, and G. S. Salyer. 2005. Emergence of competitive dominant ammonia-oxidizing bacterial populations in a full-scale industrial wastewater treatment plant. Appl. Environ. Microbiol. 71: 1105-1108.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 1105-1108
-
-
Layton, A.C.1
Dionisi, H.M.2
Kuo, H.W.3
Robinson, K.G.4
Garrett, V.M.5
Meyers, A.6
Salyer, G.S.7
-
11
-
-
24944576652
-
Communities of ammonia-oxidizing bacteria in activated sludge of various sewage treatment plants in Tokyo
-
Limpiyakorn, T., Y. Shinohara, F. Kurisu, and O. Yagi. 2005. Communities of ammonia-oxidizing bacteria in activated sludge of various sewage treatment plants in Tokyo. FEMS Microbiol. Ecol. 54: 205-217.
-
(2005)
FEMS Microbiol. Ecol
, vol.54
, pp. 205-217
-
-
Limpiyakorn, T.1
Shinohara, Y.2
Kurisu, F.3
Yagi, O.4
-
12
-
-
2342501363
-
Quantification of a novel group of nitrate-reducing bacteria in environment by real-time PCR
-
Lopez-Gutierrez, J. C., S. Henry, S. Hallet, F. Martin-Laurent, G Catroux, and L. Philippot. 2004. Quantification of a novel group of nitrate-reducing bacteria in environment by real-time PCR. J. Microbiol. Methods 57: 399-407.
-
(2004)
J. Microbiol. Methods
, vol.57
, pp. 399-407
-
-
Lopezgutierrez, J.C.1
Henry, S.2
Hallet, S.3
Martinlaurent, F.4
Catroux, G.5
Philippot, L.6
-
13
-
-
0027460328
-
Profiling of complex microbial populations using denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer, G., E. C. de Waal, and A. Uitterlinden. 1993. Profiling of complex microbial populations using denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59: 695-700.
-
(1993)
Appl. Environ. Microbiol
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
De2
Waal, E.C.3
Uitterlinden, A.4
-
14
-
-
0036242855
-
Denaturing gradient gel electrophoresis (DGGE) approaches to study the diversity of ammonia-oxidizing bacteria
-
Nicolaisen, M. H. and N. B. Ramsing. 2002. Denaturing gradient gel electrophoresis (DGGE) approaches to study the diversity of ammonia-oxidizing bacteria. J. Microbiol. Methods 50: 189-203.
-
(2002)
J. Microbiol. Methods
, vol.50
, pp. 189-203
-
-
Nicolaisen, M.H.1
Ramsing, N.B.2
-
15
-
-
2342655672
-
Amplification of real-time PCR to study effects of ammonium on population size of ammonia-oxidizing bacteria in soil
-
Okano, Y., K. R. Hristova, C. M. Leutenegger, L. E. Jackson, R. F. Denison, B. Gebreyesus, D. Lebauer, and K. M. Scow. 2004. Amplification of real-time PCR to study effects of ammonium on population size of ammonia-oxidizing bacteria in soil. Appl. Environ. Microbiol. 70: 1008-1016.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 1008-1016
-
-
Okano, Y.1
Hristova, K.R.2
Leutenegger, C.M.3
Jackson, L.E.4
Denison, R.F.5
Gebreyesus, B.6
Lebauer, D.7
Scow, K.M.8
-
16
-
-
0345341911
-
Simulation of nitrogen dynamics in flooded soils
-
Rao, P. S. C., R. E. Jessup, and K. R. Reddy. 1984. Simulation of nitrogen dynamics in flooded soils. Soil Sci. 138: 54-62.
-
(1984)
Soil Sci
, vol.138
, pp. 54-62
-
-
Rao, P.S.C.1
Jessup, R.E.2
Reddy, K.R.3
-
17
-
-
0034466757
-
Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: Implications for molecular diversity surveys
-
Purkhold, U., A. Pommerening-Roser, S. Juretschko, M. C. Schmid, H. Koops, and M. Wagner. 2000. Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: Implications for molecular diversity surveys. Appl. Environ. Microbiol. 66: 5368-5382.
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 5368-5382
-
-
Purkhold, U.1
Pommerening-Roser, A.2
Juretschko, S.3
Schmid, M.C.4
Koops, H.5
Wagner, M.6
-
18
-
-
0030814870
-
The ammonia monooxygenase structural gene amoA as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
-
Rotthauwe, J. H., K. P. Witzel, and W. Liesack. 1997. The ammonia monooxygenase structural gene amoA as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl. Environ. Microbiol. 63: 4704-4712.
-
(1997)
Appl. Environ. Microbiol
, vol.63
, pp. 4704-4712
-
-
Rotthauwe, J.H.1
Witzel, K.P.2
Liesack, W.3
-
19
-
-
26844579157
-
Use of 16S rRNA gene terminal restriction fragment analysis to assess the impact of solid retention time on the bacterial diversity of activated sludge
-
Saikaly, P. E., P. G. Stroot, and D. B. Oerther. 2005. Use of 16S rRNA gene terminal restriction fragment analysis to assess the impact of solid retention time on the bacterial diversity of activated sludge. Appl. Environ. Microbiol. 71: 5814-5822.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 5814-5822
-
-
Saikaly, P.E.1
Stroot, P.G.2
Oerther, D.B.3
-
20
-
-
0003685012
-
The Mathematical Theory of Communication
-
University of Illinois Press, Urbana, IL
-
Shannon, C. E. and W. Weaver, 1949. The Mathematical Theory of Communication. University of Illinois Press, Urbana, IL.
-
(1949)
-
-
Shannon, C.E.1
Weaver, W.2
-
21
-
-
3342920601
-
Prospects for inferring very large phylogenies by using the neighbor-joining method
-
Tamura, K., M. Nei, and S. Kumar. 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc. Natl. Acad. Sci. U.S.A. 101: 11030-11035.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A
, vol.101
, pp. 11030-11035
-
-
Tamura, K.1
Nei, M.2
Kumar, S.3
-
22
-
-
24944576652
-
Communities of ammonia-oxidizing bacteria in activated sludge of various sewage treatment plants in Tokyo
-
Tawan, L., S. Yuko, K. Futoshi, and Y. Osami. 2005. Communities of ammonia-oxidizing bacteria in activated sludge of various sewage treatment plants in Tokyo. FEMS Microbiol. Ecol. 54: 205-217.
-
(2005)
FEMS Microbiol. Ecol
, vol.54
, pp. 205-217
-
-
Tawan, L.1
Yuko, S.2
Futoshi, K.3
Osami, Y.4
-
23
-
-
33746615380
-
Development and application of real-time PCR for quantification of specific ammonia-oxidizing bacteria in activated sludge of sewage treatment systems
-
Tawan, L., K. Futoshi, and Y. Osami. 2006. Development and application of real-time PCR for quantification of specific ammonia-oxidizing bacteria in activated sludge of sewage treatment systems, Appl. Microbiol. Biotechnol. 72: 1004-1013.
-
(2006)
Appl. Microbiol. Biotechnol
, vol.72
, pp. 1004-1013
-
-
Tawan, L.1
Futoshi, K.2
Osami, Y.3
-
24
-
-
0029161102
-
In situ identification of ammonia-oxidizing bacteria
-
Wagner, M., G. Rath, G. Amann, H. Koops, and K. Schleifer. 1995 In situ identification of ammonia-oxidizing bacteria. Syst. Appl. Microbiol. 18: 251-264.
-
(1995)
Syst. Appl. Microbiol
, vol.18
, pp. 251-264
-
-
Wagner, M.1
Rath, G.2
Amann, G.3
Koops, H.4
Schleifer, K.5
-
25
-
-
0036624935
-
Bacterial community composition and function in sewage treatment systems
-
Wagner, M. and A. Loy. 2002. Bacterial community composition and function in sewage treatment systems. Curr. Opin. Biotechnol. 13: 218-227.
-
(2002)
Curr. Opin. Biotechnol
, vol.13
, pp. 218-227
-
-
Wagner, M.1
Loy, A.2
|