Identification of quantitative trait loci for grain traits in japonica rice

Agricultural Sciences in China

Volumn 9, Issue 7, 2010, Pages 929-936

  Li, Mao Mao ^a,b,c   Xu, Lei ^a   Ren, Jun Fang ^a   Cao, Gui Lan ^a   Yu, Li Qin ^c   He, Hao Hua ^b   Han, Long Zhi ^a   Koh, Hee Jong ^d  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b JIANGXI AGRICULTURAL UNIVERSITY   (China)

^c Jiangxi Academy of Agricultural Sciences   (China)

^d Seoul National University   (South Korea)

Author keywords

Drain trait; Gene action; Japonica rice; Quantitative trait locus; SSR marker

Indexed keywords

JAPONICA;

EID: 77954943595     PISSN: 16712927     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1671-2927(09)60173-5     Document Type: Article

References (27)

1. Basten C J, Weir B S, Zeng Z B. 2005. QTL Cartographer. ver. 2.5. Department of Statistics, North Carolina State University, Raleigh, NC.
2. KH Cui, SB Peng, YZ Xing, SB Yu, CG Xu, Zhang Q Molecular dissection of the genetic relationships of source, sink and transport tissue with yield traits in rice. Theoretical and Applied Genetics 2003, 106:649-658.
3. Edwards K, Johnstone C, Thompson C A simple and rapid method for the preparation of plant genomic DNA for PCR analysis. Nucleic Acids Research 1991, 9:1349.
4. Fan CC, Xing YZ, Mao HL, Lu TT, Han B, Xu CG, Li XH, Zhang QF GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encode a putative transmembrane protein. Theortical Applied Genetic 2006, 112:1164-1171.
5. Han LZ Descriptors and Data Standard for Rice (Oryza sative L.) 2006, 1-132. China Agriculture Press, Beijing, (in Chinese).
6. Hittalmani S, Shashidhar HE, Bagali PG, Huang N, Sidhu JS, Sing VP, Khush GS Molecular mapping of quantitative trait loci for plant growth, yield and yield related traits across three diverse locations in a doubled haploid rice population. Euphytica 2002, 125:207-214.
7. Huang N, Parco A, Mew T, Magpantay G, McCouch S, Guiderdoni E, Xu JC, Subudhi P, Angeles ER, Khush GS RFLP mapping of isozymes, RAPD and QTLs for grain shape, brown planthopper resistance in a doubled haploid rice population. Molecular Breeding 1997, 3:105-113.
8. Li MM, Xu L, Liu CW, Cao GL, He HH, Han LZ Progress of genetic research and QTL analysis for grain shape in rice. Chinese Journal of Agricultural Science and Technology 2008, 10:34-42. (in Chinese).
9. Li ZK, Pinaon SRM, Park WD, Paterson AH, Stansel JW Epistasis for three grain yield components in rice (Oryza sativa L.). Genetics 1997, 145:453-465.
10. Lin HX, Min SK, Xiong ZM, Qian HR, Zhuang JY, Lu J, Zheng KL, Huang N RFLP mapping of QTLs for grain shape traits in indica rice (Oryza sativa L. subsp. indica). Scientia Agricultural Sinica 1995, 28:1-7. (in Chinese).
11. Manly KF, Cudmore RH, Meer JM Map manager QTX, cross-platform software for genetic mapping. Mammalian Genome 2001, 12:930-932.
12. McCouch SR, Cho YG, Yano M, Paul E, Blinstrub M, Morishima H, Kinoshita T Report on QTL nomenclature. Rice Genetics Newsletter 1997, 14:11-13.
13. Rabiei B, Valizadeh M, Ghareyazie B, Moghaddam M, Ali AJ Identification of QTLs for rice grain size and shape of Iranian cultivars using SSR markers. Euphytica 2004, 11:325-332.
14. Shi CH Seed shape and breeding for good quality in rice. Chinese Agricultural Science Bulletin 1994, 10:41-45. (in Chinese).
15. Shinya Y, Masaru I, Junko K, Keiko S, Zentaro H, Takashiqe I, Chiharu N, Osamu K QTL analysis for plant and grain characters of sake-brewing rice using a doubled haploid population. Breeding Science 2002, 57:309-317.
16. Song XJ, Huang W, Shi M, Zhu MZ, Lin HX A QTL for rice grain width and weight encodes a previously unknown ring-type E3 ubiquitin ligase. Nature Genetics 2007, 39:623-630.
17. Stuber CW, Lincoln SE, Wolff DW, Helentjaris T, Lander ES Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers. Genetics 1992, 132:823-839.
18. Takite T Breeding for grain shape in rice. Agricultural Science 1989, 44:39-42.
19. Tan YF, Xing YZ, Li JX, Yu SB, Xu CG, Zhang QF Genetic bases of appearance quality of rice grains in Shanyou 63, an elite rice. Theoretical and Applied Genetics 2000, 101:823-829.
20. Wan XY, Wan JM, Weng JF, Jiang L, Bi JC, Wang CM, Zhai HQ Stability of QTLs for rice grain dimension and endosperm chalkiness characteristics across eight environments. Theoretical and Applied Genetics 2005, 110:1334-1346.
21. Wu CM, Sun CQ, Chen L, Li ZC, Wang XK Analysis QTL of grain shape by using of RFLP map in rice. Journal of Jilin Agricultural Sciences 2002, 27:3-7. (in Chinese).
22. Xing YZ, Tan YF, Xu CG, Hua JP, Sun XL Mapping quantitative trait loci for grain appearance traits of rice using a recombinant inbred line population. Acta Botanica Sinica 2001, 43:840-845. (in Chinese).
23. Xu JL, Xue QZ, Luo LJ, Li ZK Genetic dissection of grain weight and its related traits in rice (Oryza sativa L.). Chinese Journal of Rice Science 2002, 16:6-10. (in Chinese).
24. Yan CJ, Liang GH, Chen F, Li X, Tang SZ, Yi CD, Tian S, Lu JF, Gu MH Mapping quantitative trait loci associated with rice grain shape based on an indica/japonica backcross population. Acta Genetica Sinica 2003, 30:711-716. (in Chinese).
25. Zeng RZ, Akshay T, Liu F, Zhang GQ Mapping of the QTLs for grain shape using single segment substitution lines in rice. Scientia Agricultura Sinica 2006, 39:647-654. (in Chinese).
26. Zhang GH, Zhang GP, Qian Q, Xu LP, Zeng DL, Teng S, Bao JS QTL analysis of grain shape traits in different environments. Chinese Journal of Rice Science 2004, 18:16-22. (in Chinese).
27. Zhuang JY, Fan YY, Wu JL, Xia YW, Zheng KL Comparison of the detection of QTL for yield traits in different generations of a rice cross using two mapping approaches. Acta Genetica 2001, 28:458-464. (in Chinese).