Top-down characterization of a native highly intralinked protein: Concurrent cleavages of disulfide and protein backbone bonds

Analytical Chemistry

Volumn 82, Issue 14, 2010, Pages 6079-6089

  Chen, Jianzhong ^a,b   Shiyanov, Pavel ^a   Zhang, Liwen ^b   Schlager, John J ^a   Green Church, Kari B ^b  

^a AIR FORCE RESEARCH LABORATORY   (United States)

^b OHIO STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMIDE BOND; ASPARTIC ACIDS; CHARGED PROTEINS; COLLISION-INDUCED DISSOCIATION; CYSTEINE RESIDUES; DISSOCIATION PATHWAYS; DISULFIDE BONDS; GLUTAMIC ACID RESIDUES; HYDROGEN ATOMS; IDENTIFICATION OF PROTEINS; ION SERIES; MOBILE PROTONS; N-TERMINALS; ORBITRAP; POSITIVE MODE; PROTEIN BACKBONE; SULFHYDRYL GROUPS; TOPDOWN;

AMIDES; DISSOCIATION; ELECTROSPRAY IONIZATION; IONS; MASS SPECTROMETRY; ORGANIC ACIDS;

PROTEINS;

DISULFIDE; HYDROGEN; LYSOZYME; THIOL DERIVATIVE;

ANIMAL; ARTICLE; CHEMISTRY; CHICKEN; ELECTROSPRAY MASS SPECTROMETRY; METHODOLOGY; PROCEDURES;

ANIMALS; CHICKENS; DISULFIDES; HYDROGEN; MURAMIDASE; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; SULFHYDRYL COMPOUNDS;

EID: 77954645520     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac1006766     Document Type: Article

References (37)

1. Ren, D., Pipes, G. D., Liu, D., Shih, L. Y., Nichols, A. C., Treuheit, M. J., Brems, D. N., and Bondarenko, P. V. Anal. Biochem. 2009, 392, 12-21
2. Chait, B. T. Science 2006, 314, 65-66
3. McLafferty, F. W., Breuker, K., Jin, M., Han, X., Infusini, G., Jiang, H., Kong, X., and Begley, T. P. FEBS J. 2007, 274, 6256-6268
4. Kelleher, N. L. Anal. Chem. 2004, 76, 197A-203A
5. Whitelegge, J., Halgand, F., Souda, P., and Zabrouskov, V. Expert Rev. Proteomics 2006, 3, 585-596
6. Han, X. M., Jin, M., Breuker, K., and McLafferty, F. W. Science 2006, 314, 109-112
7. Zubarev, R. A., Haselmann, K. F., Budnik, B., Kjeldsen, F., and Jensen, F. Eur. J. Mass Spectrom. 2002, 8, 337-349
8. Zubarev, R. A., Kruger, N. A., Fridriksson, E. K., Lewis, M. A., Horn, D. M., Carpenter, B. K., and McLafferty, F. W. J. Am. Chem. Soc. 1999, 121, 2857-2862
9. Ryan, C. M., Souda, P., Halgand, F., Wong, D. T., Loo, J. A., Faull, K. F., and Whitelegge, J. P. J. Am. Soc. Mass Spectrom. 2010, 21, 908-917
10. Chrisman, P. A. and McLuckey, S. A. J. Proteome Res. 2002, 1, 549-557
11. Stephenson, J. L., Jr., Cargile, B. J., and McLuckey, S. A. Rapid Commun. Mass Spectrom. 1999, 13, 2040-2048
12. Wells, J. M., Stephenson, J. L., and McLuckey, S. A. Int. J. Mass Spectrom. 2000, 203, A1-A9
13. Kalli, A. and Hakansson, K. Int. J. Mass Spectrom. 2007, 263, 71-81
14. Fung, Y. M. E., Kjeldsen, F., Silivra, O. A., Chan, T. W. D., and Zubarev, R. A. Angew. Chem., Int. Ed. 2005, 44, 6399-6403
15. Zhang, M. X. and Kaltashov, I. A. Anal. Chem. 2006, 78, 4820-4829
16. Bean, M. F. and Carr, S. A. Anal. Biochem. 1992, 201, 216-226
17. Tie, J. K., Mutucumarana, V. P., Straight, D. L., Carrick, K. L., Pope, R. M., and Stafford, D. W. J. Biol. Chem. 2003, 278, 45468-45475
18. Wallis, T. P., Huang, C. Y., Nimkar, S. B., Young, P. R., and Gorman, J. J. J. Biol. Chem. 2004, 279, 20729-20741
19. Kim, H. I. and Beauchamp, J. L. J. Am. Chem. Soc. 2008, 130, 1245-1257
20. Kim, H. I. and Beauchamp, J. L. J. Am. Soc. Mass Spectrom. 2009, 20, 157-166
21. Lioe, H. and O'Hair, R. A. J. J. Am. Soc. Mass Spectrom. 2007, 18, 1109-1123
22. Senko, M. W., Beu, S. C., and Mclafferty, F. W. J. Am. Soc. Mass Spectrom. 1995, 6, 229-233
23. Horn, D. M., Zubarev, R. A., and McLafferty, F. W. J. Am. Soc. Mass Spectrom. 2000, 11, 320-332
24. Gu, C., Tsaprailis, G., Breci, L., and Wysocki, V. H. Anal. Chem. 2000, 72, 5804-5813
25. Huang, Y., Triscari, J. M., Tseng, G. C., Pasa-Tolic, L., Lipton, M. S., Smith, R. D., and Wysocki, V. H. Anal. Chem. 2005, 77, 5800-5813
26. Wysocki, V. H., Tsaprailis, G., Smith, L. L., and Breci, L. A. J. Mass Spectrom. 2000, 35, 1399-1406
27. Loo, J. A., Loo, R. R., Udseth, H. R., Edmonds, C. G., and Smith, R. D. Rapid Commun. Mass Spectrom. 1991, 5, 101-105
28. Tabb, D. L., Smith, L. L., Breci, L. A., Wysocki, V. H., Lin, D., and Yates, J. R., III Anal. Chem. 2003, 75, 1155-1163
29. Lioe, H., Duan, M., and O'Hair, R. A. J. Rapid Commun. Mass Spectrom. 2007, 21, 2727-2733
30. Farrugia, J. M. and O'Hair, R. A. J. Int. J. Mass Spectrom. 2003, 222, 229-242
31. Farrugia, J. M., Taverner, T., and O'Hair, R. A. J. Int. J. Mass Spectrom. 2001, 209, 99-112
32. Mcmillen, D. F. and Golden, D. M. Annu. Rev. Phys. Chem. 1982, 33, 493-532
33. Benson, S. W. In Thermochemical Kinetics; Wiley-Interscience: New York, 1976; p 309.
34. Rockwood, A. L., Busman, M., and Smith, R. D. Int. J. Mass Spectrom. 1991, 111, 103-129
35. Busman, M., Rockwood, A. L., and Smith, R. D. J. Phys. Chem. 1992, 96, 2397-2400
36. Hale, J. E., Butler, J. P., Knierman, M. D., and Becker, G. W. Anal. Biochem. 2000, 287, 110-117
37. Kundrot, C. E. and Richards, F. M. J. Mol. Biol. 1987, 193, 157-170