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Volumn 27, Issue 7, 2010, Pages 413-422

There is a steady-state transcriptome in exponentially growing yeast cells

Author keywords

mRNA stability; Saccharomyces cere visiae; Steady state; Transcription rate; Transcriptome

Indexed keywords

AGAR; MESSENGER RNA; TRANSCRIPTOME; CULTURE MEDIUM; FUNGAL RNA;

EID: 77954636295     PISSN: 0749503X     EISSN: 10970061     Source Type: Journal    
DOI: 10.1002/yea.1768     Document Type: Article
Times cited : (29)

References (19)
  • 1
    • 33747859675 scopus 로고    scopus 로고
    • BABELOMICS: A systems biology perspective in the functional annotation of genome-scale experiments
    • Al-Shahrour F, Minguez P, Tarraga J, et al. 2006. BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments. Nucleic Acids Res 34: W472-476.
    • (2006) Nucleic Acids Res , vol.34
    • Al-Shahrour, F.1    Minguez, P.2    Tarraga, J.3
  • 2
    • 16544390970 scopus 로고    scopus 로고
    • A new set of DNA macrochips for the yeast Saccharomyces cerevisiae: Features and uses
    • Alberola TM, García-Martínez J, Ant́unez O, et al. 2004. A new set of DNA macrochips for the yeast Saccharomyces cerevisiae: features and uses. Int Microbiol 7: 199-206.
    • (2004) Int Microbiol , vol.7 , pp. 199-206
    • Alberola, T.M.1    García-Martínez, J.2    Ant́unez, O.3
  • 3
    • 0347513219 scopus 로고    scopus 로고
    • Characterizing gene sets with FuncAssociate
    • Berriz GF, King OD, Bryant B, et al. 2003. Characterizing gene sets with FuncAssociate. Bioinformatics 19: 2502-2504.
    • (2003) Bioinformatics , vol.19 , pp. 2502-2504
    • Berriz, G.F.1    King, O.D.2    Bryant, B.3
  • 5
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • DeRisi JL, Iyer VR, Brown PO. 1997. Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278: 680-686.
    • (1997) Science , vol.278 , pp. 680-686
    • Derisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 6
    • 3242726930 scopus 로고    scopus 로고
    • Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms
    • García-Martínez J, Aranda A, Ṕerez-Ortín JE. 2004. Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms. Mol Cell 15: 303-313.
    • (2004) Mol Cell , vol.15 , pp. 303-313
    • García-Martínez, J.1    Aranda, A.2    Ṕerez-Ortín, J.E.3
  • 8
    • 2942561052 scopus 로고    scopus 로고
    • Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors
    • Grigull J, Mnaimneh S, Pootoolal J, et al. 2004. Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors. Mol Cell Biol 24: 5534-5547.
    • (2004) Mol Cell Biol , vol.24 , pp. 5534-5547
    • Grigull, J.1    Mnaimneh, S.2    Pootoolal, J.3
  • 9
    • 0035991154 scopus 로고    scopus 로고
    • Hybridization array technology coupled with chemostat culture: Tools to interrogate gene expression in Saccharomyces cerevisiae
    • Hayes A, Zhang N, Wu J, et al. 2002. Hybridization array technology coupled with chemostat culture: tools to interrogate gene expression in Saccharomyces cerevisiae. Methods 26: 281-290.
    • (2002) Methods , vol.26 , pp. 281-290
    • Hayes, A.1    Zhang, N.2    Wu, J.3
  • 10
    • 0033067906 scopus 로고    scopus 로고
    • Nuclear run-on assays: Assessing transcription by measuring density of engaged RNA polymerases
    • Hirayoshi K, Lis JT. 1999. Nuclear run-on assays: assessing transcription by measuring density of engaged RNA polymerases. Methods Enzymol 304: 351-362.
    • (1999) Methods Enzymol , vol.304 , pp. 351-362
    • Hirayoshi, K.1    Lis, J.T.2
  • 11
    • 0032567081 scopus 로고    scopus 로고
    • Dissecting the regulatory circuitry of a eukaryotic genome
    • Holstege FC, Jennings EG, Wyrick JJ, et al. 1998. Dissecting the regulatory circuitry of a eukaryotic genome. Cell 95: 717-728.
    • (1998) Cell , vol.95 , pp. 717-728
    • Holstege, F.C.1    Jennings, E.G.2    Wyrick, J.J.3
  • 12
    • 71149121704 scopus 로고    scopus 로고
    • Coordination of gene expression with growth rate: A feedback or a feed-forward strategy?
    • Levy S, Barkai N. 2009. Coordination of gene expression with growth rate: a feedback or a feed-forward strategy? FEBS Lett 583: 3974-3978.
    • (2009) FEBS Lett , vol.583 , pp. 3974-3978
    • Levy, S.1    Barkai, N.2
  • 14
    • 70149113767 scopus 로고    scopus 로고
    • Regulon-specific control of transcription elongation across the yeast genome
    • Pelechano V, Jimeno-Gonźalez S, Rodríguez-Gil A, et al. 2009. Regulon-specific control of transcription elongation across the yeast genome. PLoS Genet 5: e1000614.
    • (2009) PLoS Genet , vol.5
    • Pelechano, V.1    Jimeno-Gonźalez, S.2    Rodríguez-Gil, A.3
  • 16
  • 17
    • 17044399754 scopus 로고    scopus 로고
    • Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit
    • Radonjic M, Andrau JC, Lijnzaad P, et al. 2005. Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit. Mol Cell 18: 171-183.
    • (2005) Mol Cell , vol.18 , pp. 171-183
    • Radonjic, M.1    Andrau, J.C.2    Lijnzaad, P.3
  • 18
    • 33845935641 scopus 로고    scopus 로고
    • Growth-rate regulated genes have profound impact on interpretation of transcriptome profiling in Saccharomyces cerevisiae
    • Regenberg B, Grotkjaer T, Winther O, et al. 2006. Growth-rate regulated genes have profound impact on interpretation of transcriptome profiling in Saccharomyces cerevisiae. Genome Biol 7: R107.
    • (2006) Genome Biol , vol.7
    • Regenberg, B.1    Grotkjaer, T.2    Winther, O.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.