-
1
-
-
0042197522
-
Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers
-
Avrahami, S., W. Liesack, and R. Conrad. 2003. Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers. Environ. Microbiol. 5:691-705.
-
(2003)
Environ. Microbiol
, vol.5
, pp. 691-705
-
-
Avrahami, S.1
Liesack, W.2
Conrad, R.3
-
2
-
-
0018401930
-
Population ecology of nitrifying bacteria
-
Belser, L.W. 1979. Population ecology of nitrifying bacteria. Ann. Rev. Microbiol. 33:309-333.
-
(1979)
Ann. Rev. Microbiol
, vol.33
, pp. 309-333
-
-
Belser, L.W.1
-
3
-
-
0000000468
-
Use of nitrifier activity measurements to estimate the efficiency of viable nitrifier counts in soils and sediments
-
Belser, L.W., and E.L. Mays. 1982. Use of nitrifier activity measurements to estimate the efficiency of viable nitrifier counts in soils and sediments. Appl. Environ. Microbiol. 43:945-948.
-
(1982)
Appl. Environ. Microbiol
, vol.43
, pp. 945-948
-
-
Belser, L.W.1
Mays, E.L.2
-
4
-
-
26844541457
-
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
-
Francis, C.A., K.J. Roberts, J.M. Beman, A.E. Santoro, and B.B. Oakley. 2005. Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc. Natl. Acad. Sci. USA 102:14683-14688.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 14683-14688
-
-
Francis, C.A.1
Roberts, K.J.2
Beman, J.M.3
Santoro, A.E.4
Oakley, B.B.5
-
5
-
-
33750884954
-
Reduction of nitrous oxide emission from pig manure composting by addition of nitrite-oxidizing bacteria
-
Fukumoto, Y., K. Suzuki, T. Osada, K. Kuroda, D. Hanajima, T. Yasuda, and K. Haga. 2006. Reduction of nitrous oxide emission from pig manure composting by addition of nitrite-oxidizing bacteria. Environ. Sci. Technol. 40:6787-6791.
-
(2006)
Environ. Sci. Technol
, vol.40
, pp. 6787-6791
-
-
Fukumoto, Y.1
Suzuki, K.2
Osada, T.3
Kuroda, K.4
Hanajima, D.5
Yasuda, T.6
Haga, K.7
-
6
-
-
0028161639
-
Ammonia oxidation in nitrosomonas at NH3 concentrations near Km: Effects of pH and temperature
-
Groeneweg, J., B. Sellner, and W. Tappe. 1994. Ammonia oxidation in nitrosomonas at NH3 concentrations near Km: effects of pH and temperature. Water Res. 28:2561-2566.
-
(1994)
Water Res
, vol.28
, pp. 2561-2566
-
-
Groeneweg, J.1
Sellner, B.2
Tappe, W.3
-
7
-
-
0032941279
-
Characteristics of a high-concentration-ammonium sulfate-requiring ammonia-oxidizing bacterium isolated from deodorization plants of chicken farms
-
Hatayama, R., K. Chiba, K. Noda, R. Takahashi, T. Kanehira, K. Serata, M. Shinohara, and T. Tokuyama. 1999. Characteristics of a high-concentration-ammonium sulfate-requiring ammonia-oxidizing bacterium isolated from deodorization plants of chicken farms. J. Biosci. Bioeng. 87:245-248.
-
(1999)
J. Biosci. Bioeng
, vol.87
, pp. 245-248
-
-
Hatayama, R.1
Chiba, K.2
Noda, K.3
Takahashi, R.4
Kanehira, T.5
Serata, K.6
Shinohara, M.7
Tokuyama, T.8
-
8
-
-
41149153310
-
A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring
-
Hatzenpichler, R., E.V. Lebedeva, E. Spieck, K. Stoecker, A. Richter, H. Daims, and M. Wagner. 2008. A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring. Proc. Natl. Acad. Sci. USA 105:2134-2139.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 2134-2139
-
-
Hatzenpichler, R.1
Lebedeva, E.V.2
Spieck, E.3
Stoecker, K.4
Richter, A.5
Daims, H.6
Wagner, M.7
-
9
-
-
0032878687
-
Comparison of Nitrosospira strains isolated from terrestrial environments
-
Jiang, Q.Q., and L.R. Bakken. 1999. Comparison of Nitrosospira strains isolated from terrestrial environments. FEMS Microbiol. Ecol. 30:171-186.
-
(1999)
FEMS Microbiol. Ecol
, vol.30
, pp. 171-186
-
-
Jiang, Q.Q.1
Bakken, L.R.2
-
10
-
-
65649091783
-
Ammonia biofiltration and community analysis of ammonia-oxidizing bacteria in biofilters
-
Jun, Y., and X. Wenfeng. 2009. Ammonia biofiltration and community analysis of ammonia-oxidizing bacteria in biofilters. Bioresour. Technol. 100:3869-3876.
-
(2009)
Bioresour. Technol
, vol.100
, pp. 3869-3876
-
-
Jun, Y.1
Wenfeng, X.2
-
11
-
-
0032189479
-
The "cut-off probability" as the measure of quantal improbability in the dilution method
-
Kohno, T., and S. Fukunaga. 1998. The "cut-off probability" as the measure of quantal improbability in the dilution method. Water Res. 32:3099-3107.
-
(1998)
Water Res
, vol.32
, pp. 3099-3107
-
-
Kohno, T.1
Fukunaga, S.2
-
12
-
-
25644435673
-
Isolation of an autotrophic ammonia-oxidizing marine archaeon
-
Konneke, M., A.E. Bernhard, J.R. de la Torre, C.B. Walker, J.B. Waterbury, and D.A. Stahl. 2005. Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 437:543-546.
-
(2005)
Nature
, vol.437
, pp. 543-546
-
-
Konneke, M.1
Bernhard, A.E.2
Torre, J.R.D.L.3
Walker, C.B.4
Waterbury, J.B.5
Stahl, D.A.6
-
13
-
-
0034868585
-
Distribution and ecophysiology of the nitrifying bacteria emphasizing cultured species
-
Koops, H.-P., and A. Pommerening-Röser. 2001. Distribution and ecophysiology of the nitrifying bacteria emphasizing cultured species. FEMS Microbiol. Ecol. 37:1-9.
-
(2001)
FEMS Microbiol. Ecol
, vol.37
, pp. 1-9
-
-
Koops, H.-P.1
Pommerening-Röser, A.2
-
14
-
-
0034548634
-
Changes in the community structure ofammonia-oxidizing bacteria during secondary succession of calcareous grasslands
-
Kowalchuk, G.A., A.W. Stienstra, G.H.J. Heilig, J.R. Stephen, and J.W. Woldendorp. 2000. Changes in the community structure ofammonia-oxidizing bacteria during secondary succession of calcareous grasslands. Environ. Microbiol. 2:99-110.
-
(2000)
Environ. Microbiol
, vol.2
, pp. 99-110
-
-
Kowalchuk, G.A.1
Stienstra, A.W.2
Heilig, G.H.J.3
Stephen, J.R.4
Woldendorp, J.W.5
-
15
-
-
3242810318
-
MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar, S., K. Tamura, and M. Nei. 2004. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform. 5:150-163.
-
(2004)
Brief. Bioinform
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
16
-
-
0030152606
-
Emissions of malodorous compounds and greenhouse gases from composting swine feces
-
Kuroda, K., T. Osada, M. Yonaga, A. Kanematsu, T. Nitta, S. Mouri, and T. Kojima. 1996. Emissions of malodorous compounds and greenhouse gases from composting swine feces. Bioresour. Technol. 56:265-271.
-
(1996)
Bioresour. Technol
, vol.56
, pp. 265-271
-
-
Kuroda, K.1
Osada, T.2
Yonaga, M.3
Kanematsu, A.4
Nitta, T.5
Mouri, S.6
Kojima, T.7
-
17
-
-
34249862426
-
Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea
-
Lam, P., M.M. Jensen, G. Lavik, D.F. McGinnis, B. Muller, C.J. Schubert, R. Amann, B. Thamdrup, and M.M.M. Kuypers. 2007. Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea. Proc. Natl. Acad. Sci. USA 104:7104-7109.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 7104-7109
-
-
Lam, P.1
Jensen, M.M.2
Lavik, G.3
McGinnis, D.F.4
Muller, B.5
Schubert, C.J.6
Amann, R.7
Thamdrup, B.8
Kuypers, M.M.M.9
-
18
-
-
33747479446
-
Archaea predominate among ammonia-oxidizing prokaryotes in soils
-
Leininger, S., T. Urich, M. Schloter, L. Schwark, J. Qi, G.W. Nicol, J.I. Prosser, S.C. Schuster, and C. Schleper. 2006. Archaea predominate among ammonia-oxidizing prokaryotes in soils. Nature 442:806-809.
-
(2006)
Nature
, vol.442
, pp. 806-809
-
-
Leininger, S.1
Urich, T.2
Schloter, M.3
Schwark, L.4
Qi, J.5
Nicol, G.W.6
Prosser, J.I.7
Schuster, S.C.8
Schleper, C.9
-
19
-
-
0032874459
-
Use of molecular and isotopic techniques to monitor the response of autotrophic ammonia-oxidizing populations of the β-subdivision of the class proteobacteria in arable soils to nitrogen fertilizer
-
Mendum, T.A., R.E. Sockett, and P.R. Hirsch. 1999. Use of molecular and isotopic techniques to monitor the response of autotrophic ammonia-oxidizing populations of the β-subdivision of the class proteobacteria in arable soils to nitrogen fertilizer. Appl. Environ. Microbiol. 65:4155-4162.
-
(1999)
Appl. Environ. Microbiol
, vol.65
, pp. 4155-4162
-
-
Mendum, T.A.1
Sockett, R.E.2
Hirsch, P.R.3
-
20
-
-
18144367380
-
Microbial processes responsible for nitrous oxide production from acid soils in different land-use patterns in Pasirmayang, central Sumatra
-
Nakajima, Y., S. Ishizuka, H. Tsuruta, A. Iswandi, and D. Murdiyarso. 2005. Microbial processes responsible for nitrous oxide production from acid soils in different land-use patterns in Pasirmayang, central Sumatra, Indonesia. Nutr. Cycl. Agroecosyst. 71:33-42.
-
(2005)
Indonesia. Nutr. Cycl. Agroecosyst
, vol.71
, pp. 33-42
-
-
Nakajima, Y.1
Ishizuka, S.2
Tsuruta, H.3
Iswandi, A.4
Murdiyarso, D.5
-
21
-
-
0036167265
-
Diversity of ammonia monooxygenase operon in autotrophic ammonia-oxidizing bacteria
-
Norton, J.M., J.J. Alzerreca, Y. Suwa, and M.G. Klotz. 2002. Diversity of ammonia monooxygenase operon in autotrophic ammonia-oxidizing bacteria. Arch. Microbiol. 177:139-149.
-
(2002)
Arch. Microbiol
, vol.177
, pp. 139-149
-
-
Norton, J.M.1
Alzerreca, J.J.2
Suwa, Y.3
Klotz, M.G.4
-
22
-
-
2342655672
-
Application of real-time PCR to study effects of ammonium on population size of ammonia-oxidizing bacteria in soil
-
Okano, Y., K.R. Hristova, C.M. Leutenegger, L.E. Jackson, R.F. Denison, B. Gebreyesus, D. Lebauer, and K.M. Scow. 2004. Application of real-time PCR to study effects of ammonium on population size of ammonia-oxidizing bacteria in soil. Appl. Environ. Microbiol. 70:1008-1016.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 1008-1016
-
-
Okano, Y.1
Hristova, K.R.2
Leutenegger, C.M.3
Jackson, L.E.4
Denison, R.F.5
Gebreyesus, B.6
Lebauer, D.7
Scow, K.M.8
-
23
-
-
3342882929
-
Evaluating the effect of dissolved oxygen on ammonia-oxidizing bacterial communities in activated sludge
-
Park, H.-D., and D.R. Noguera. 2004. Evaluating the effect of dissolved oxygen on ammonia-oxidizing bacterial communities in activated sludge. Water Res. 38:3275-3286.
-
(2004)
Water Res
, vol.38
, pp. 3275-3286
-
-
Park, H.-D.1
Noguera, D.R.2
-
24
-
-
33747341311
-
Occurrence of ammonia-oxidizing archaea in wastewater treatment plant bioreactors
-
Park, H.-D., G.F. Wells, H. Bae, C.S. Criddle, and C.A. Francis. 2006. Occurrence of ammonia-oxidizing archaea in wastewater treatment plant bioreactors. Appl. Environ. Microbiol. 72:5643-5647.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 5643-5647
-
-
Park, H.-D.1
Wells, G.F.2
Bae, H.3
Criddle, C.S.4
Francis, C.A.5
-
25
-
-
0034016511
-
Quantitative analysis of ammonia oxidizing bacteria using competitive PCR
-
Phillips, C.J., E.A. Paul, and J.I. Prosser. 2000. Quantitative analysis of ammonia oxidizing bacteria using competitive PCR. FEMS Microbiol. Ecol. 32:167-175.
-
(2000)
FEMS Microbiol. Ecol
, vol.32
, pp. 167-175
-
-
Phillips, C.J.1
Paul, E.A.2
Prosser, J.I.3
-
26
-
-
1242347139
-
Effects of pH and oxygen and ammonium concentrations on the community structure of nitrifying bacteria from wastewater
-
Prinčič, A., I. Mahne, F. Megušar, E.A. Paul, and J.M. Tiedje. 1998. Effects of pH and oxygen and ammonium concentrations on the community structure of nitrifying bacteria from wastewater. Appl. Environ. Microbiol. 64:3584-3590.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 3584-3590
-
-
Prinčič, A.1
Mahne, I.2
Megušar, F.3
Paul, E.A.4
Tiedje, J.M.5
-
27
-
-
0024822090
-
Autotrophic nitrification in bacteria
-
Prosser, J.I. 1989. Autotrophic nitrification in bacteria. Adv. Microbiol. Physiol. 30:125-181.
-
(1989)
Adv. MicroBiol. Physiol
, vol.30
, pp. 125-181
-
-
Prosser, J.I.1
-
28
-
-
0031736055
-
Assessment of changes in microbial community structure during operation of an ammonia biofilter with molecular tools
-
Sakano, Y., and L. Kerkhof. 1998. Assessment of changes in microbial community structure during operation of an ammonia biofilter with molecular tools. Appl. Environ. Microbiol. 64:4877-4882.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 4877-4882
-
-
Sakano, Y.1
Kerkhof, L.2
-
29
-
-
6944223848
-
Two kinds of ammonia-oxidizing bacteria isolated from biologically deodorizing plants in cold district
-
Satoh, K., R. Takizawa, M. Sarai, N. Sato, R. Takahashi, and T. Tokuyama. 2004. Two kinds of ammonia-oxidizing bacteria isolated from biologically deodorizing plants in cold district. J. Biosci. Bioeng. 98:207-210.
-
(2004)
J. Biosci. Bioeng
, vol.98
, pp. 207-210
-
-
Satoh, K.1
Takizawa, R.2
Sarai, M.3
Sato, N.4
Takahashi, R.5
Tokuyama, T.6
-
30
-
-
85103230076
-
Autotrophic Nitrifying Bacteria
-
In R.W. Weaver, S. Angle, and P. Bottomley (ed.), Microbiological and Biochemical Properties. Soil Science Society of America, Madison
-
Schmidt, E.L., and L.W. Belser. 1994. Autotrophic Nitrifying Bacteria, p. 159-177. In R.W. Weaver, S. Angle, and P. Bottomley (ed.), Methods of Soil Analysis, Part 2, Microbiological and Biochemical Properties. Soil Science Society of America, Madison.
-
(1994)
Methods of Soil Analysis, Part 2
, pp. 159-177
-
-
Schmidt, E.L.1
Belser, L.W.2
-
31
-
-
0029659250
-
Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of micro-electrodes
-
Schramm, A., L.H. Larsen, N.P. Revsbech, N.B. Ramsing, R. Amann, and K.-H. Schleifer. 1996. Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of micro-electrodes. Appl. Environ. Microbiol. 62:4641-4647.
-
(1996)
Appl. Environ. Microbiol
, vol.62
, pp. 4641-4647
-
-
Schramm, A.1
Larsen, L.H.2
Revsbech, N.P.3
Ramsing, N.B.4
Amann, R.5
Schleifer, K.-H.6
-
32
-
-
38949163276
-
Limitations of the use of group-specific primers in real-time PCR as appear from quantitative analyses of closely related ammonia-oxidising species
-
Sekido, T., P.L.E. Bodelier, T. Shoji, Y. Suwa, and H.J. Laanbroek. 2008. Limitations of the use of group-specific primers in real-time PCR as appear from quantitative analyses of closely related ammonia-oxidising species. Water Res. 42:1093-1101.
-
(2008)
Water Res
, vol.42
, pp. 1093-1101
-
-
Sekido, T.1
Bodelier, P.L.E.2
Shoji, T.3
Suwa, Y.4
Laanbroek, H.J.5
-
33
-
-
0030250971
-
Kinetic characteristics of ammonium-oxidizer communities in a california oak woodland-annual grassland
-
Stark, J.M., and M.K. Firestone. 1996. Kinetic characteristics of ammonium-oxidizer communities in a california oak woodland-annual grassland. Soil Biol. Biochem. 28:1307-1317.
-
(1996)
Soil Biol. Biochem Elbe estuary. FEMS Microbiol
, vol.28
, pp. 1307-1317
-
-
Stark, J.M.1
Firestone, M.K.2
-
34
-
-
0028991717
-
The ammonia-oxidizing nitrifying population of the River Elbe estuary
-
Stehr, G., B. Böttcher, P. Dittberner, G. Rath, and H.-P. Koops. 1995. The ammonia-oxidizing nitrifying population of the River Elbe estuary. FEMS Microbiol. Ecol. 17:177-186.
-
(1995)
FEMS Microbiol. Ecol
, vol.17
, pp. 177-186
-
-
Stehr, G.1
Böttcher, B.2
Dittberner, P.3
Rath, G.4
Koops, H.-P.5
-
35
-
-
0028002061
-
Ammonia-oxidizing bacteria with different sensitivities to (NH4)2SO4 in activated sludges
-
Suwa, Y., Y. Imamura, T. Suzuki, T. Tashiro, and Y. Urushigawa. 1994. Ammonia-oxidizing bacteria with different sensitivities to (NH4)2SO4 in activated sludges. Water Res. 28:1523-1532.
-
(1994)
Water Res
, vol.28
, pp. 1523-1532
-
-
Suwa, Y.1
Imamura, Y.2
Suzuki, T.3
Tashiro, T.4
Urushigawa, Y.5
-
36
-
-
0031421454
-
Phylogenetic relationships of activated sludge isolates of ammonia oxidizers with different sensitivities to ammonia sulfate
-
Suwa, Y., T. Sumino, and K. Noto. 1997. Phylogenetic relationships of activated sludge isolates of ammonia oxidizers with different sensitivities to ammonia sulfate. J. Gen. Appl. Microbiol. 43:373-379.
-
(1997)
J. Gen. Appl. Microbiol
, vol.43
, pp. 373-379
-
-
Suwa, Y.1
Sumino, T.2
Noto, K.3
-
37
-
-
0001478523
-
Removal of NH3 by a peat biofilter without and with nitrifier
-
Togashi, I., M. Suzuki, M. Hirai, M. Shoda, and H. Kubota. 1986. Removal of NH3 by a peat biofilter without and with nitrifier. J. Ferment. Technol. 64:425-432.
-
(1986)
J. Ferment. Technol
, vol.64
, pp. 425-432
-
-
Togashi, I.1
Suzuki, M.2
Hirai, M.3
Shoda, M.4
Kubota, H.5
-
38
-
-
28644435323
-
Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling
-
Treusch, A.H., S. Leininger, A. Kletzin, S.C. Schuster, H.-P. Klenk, and C. Schleper. 2005. Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling. Environ. Microbiol. 7:1985-1995.
-
(2005)
Environ. Microbiol
, vol.7
, pp. 1985-1995
-
-
Treusch, A.H.1
Leininger, S.2
Kletzin, A.3
Schuster, S.C.4
Klenk, H.-P.5
Schleper, C.6
-
39
-
-
11144354360
-
Environmental genome shotgun sequencing of the sargasso sea
-
Venter, J.C., K. Remington, and J.F. Heidelberg et al. 2004. Environmental genome shotgun sequencing of the sargasso sea. Science 304:66-74.
-
(2004)
Science
, vol.304
, pp. 66-74
-
-
Venter, J.C.1
Remington, K.2
Heidelberg, J.F.3
-
40
-
-
0031214761
-
Biofiltration: A promising and cost-effective control technology for odors, VOCs and air toxics
-
Wani, A.H., R.M.R. Branion, and A.K. Lau. 1997. Biofiltration: a promising and cost-effective control technology for odors, VOCs and air toxics. J. Environ. Sci. Health, Part A 32:2027-2055.
-
(1997)
J. Environ. Sci. Health, Part A
, vol.32
, pp. 2027-2055
-
-
Wani, A.H.1
Branion, R.M.R.2
Lau, A.K.3
-
41
-
-
1842576603
-
DGGE method for analyzing 16S rDNA of methanogenic archaeal community in paddy field soil
-
Watanabe, T., S. Asakawa, A. Nakamura, K. Nagaoka, and M. Kimura. 2004. DGGE method for analyzing 16S rDNA of methanogenic archaeal community in paddy field soil. FEMS Microbiol. Lett. 232:153-163.
-
(2004)
FEMS Microbiol. Lett.
, vol.232
, pp. 153-163
-
-
Watanabe, T.1
Asakawa, S.2
Nakamura, A.3
Nagaoka, K.4
Kimura, M.5
-
42
-
-
0344547854
-
Composting facility odor control using biofilters
-
In H.A. Hoitink, and H.M. Keener (ed.), Ohio State University, Wooster
-
Williams, T.O., and F.C. Miller. 1993. Composting facility odor control using biofilters, p. 262-281. In H.A. Hoitink, and H.M. Keener (ed.), Science and Engineering of Composting: Design, Environmental, Microbiological and Utilization Aspects. Ohio State University, Wooster.
-
(1993)
Science and Engineering of Composting: Design, Environmental, Microbiological and Utilization Aspects
, pp. 262-281
-
-
Williams, T.O.1
Miller, F.C.2
-
43
-
-
56249084571
-
Evaluation of full-scale biofilter with rockwool mixture treating ammonia gas from livestock manure composting
-
Yasuda, T., K. Kuroda, Y. Fukumoto, D. Hanajima, and K. Suzuki. 2009. Evaluation of full-scale biofilter with rockwool mixture treating ammonia gas from livestock manure composting. Bioresour. Technol. 100:1568-1572.
-
(2009)
Bioresour. Technol
, vol.100
, pp. 1568-1572
-
-
Yasuda, T.1
Kuroda, K.2
Fukumoto, Y.3
Hanajima, D.4
Suzuki, K.5
|