Quantitative PCR assays to survey the bovine adenovirus levels in environmental samples

Journal of Applied Microbiology

Volumn 109, Issue 2, 2010, Pages 605-612

  Wong, K ^a   Xagoraraki, I ^a  

^a Michigan State University   (United States)

Author keywords

bovine adenoviruses; faecal indicator; quantitative PCR

Indexed keywords

ASSAYS; CULTIVATION; FARMS; MAMMALS; MANURES; POLYMERASE CHAIN REACTION; SURFACE WATERS;

BOVINE ADENOVIRUS; DAIRY MANURES; ENVIRONMENTAL SAMPLE; FECAL INDICATORS; GENOME EQUIVALENT; PCR ASSAY; QUANTITATIVE PCR; QUANTITATIVE POLYMERASE CHAIN REACTION; SAMPLE CONCENTRATION; TILE DRAINAGE;

FERTILIZERS;

ASSAY; CATTLE; GENOME; MANURE; PHYLOGENETICS; POLYMERASE CHAIN REACTION; QUANTITATIVE ANALYSIS; SPECIES DIVERSITY; SURFACE WATER; VIRUS; WATER POLLUTION;

ARTICLE; BOVINE ADENOVIRUS; BOVINE ADENOVIRUS 1; BOVINE ADENOVIRUS 2; BOVINE ADENOVIRUS 4; CATTLE; FECES; MANURE; NONHUMAN; PHYLOGENY; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; SEROTYPE; WATER SUPPLY;

BOS; BOVINAE; BOVINE ADENOVIRUS;

EID: 77954480057     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2010.04684.x     Document Type: Article

References (11)

1. Haramoto, E., Katayama, H., Oguma, K. Ohgaki, S. (2005) Application of cation-coated filter method to detection of noroviruses, enteroviruses, adenoviruses, and torque teno viruses in the Tamagawa River in Japan. Appl Environ Microbiol 71, 2403 2411.
2. He, J.W. Jiang, S. (2005) Quantification of enterococci and human adenoviruses in environmental samples by real-time PCR. Appl Environ Microbiol 71, 2250 2255. (Pubitemid 40646963)
3. Heim, A., Ebnet, C., Harste, G. Pring-Akerblom, P. (2003) Rapid and quantitative detection of human adenovirus DNA by real-time PCR (vol 70, pg 228, 2003). J Med Virol 71, 320 320.
4. Hrudey, S.E. Hrudey, E.J. (2004) Safe Drinking Water: Lessons from Recent Outbreaks in Affluent Nations.
5. Hundesa, A., de Motes, C.M., Bofill-Mas, S., Albinana-Gimenez, N. Girones, R. (2006) Identification of human and animal adenoviruses and polyomaviruses for determination of sources of fecal contamination in the environment. Appl Environ Microbiol 72, 7886 7893.
6. Jimenez-Clavero, M.A., Fernandez, C., Ortiz, J.A., Pro, J., Carbonell, G., Tarazona, J.V., Roblas, N. Ley, V. (2003) Teschoviruses as indicators of porcine fecal contamination of surface water. Appl Environ Microbiol 69, 6311 6315.
7. Jimenez-Clavero, M.A., Escribano-Romero, E., Mansilla, C., Gomez, N., Cordoba, L., Roblas, N., Ponz, F., Ley, V. et al. (2005) Survey of bovine enterovirus in biological and environmental samples by a highly sensitive real-time reverse transcription-PCR. Appl Environ Microbiol 71, 3536 3543.
8. de Motes, C.M., Clemente-Casares, P., Hundesa, A., Martin, M. Girones, R. (2004) Detection of bovine and porcine adenoviruses for tracing the source of fecal contamination. Appl Environ Microbiol 70, 1448 1454.
9. Pell, A.N. (1997) Manure and microbes: public and animal health problem? J Dairy Sci 80, 2673 2681.
10. USEPA 2006) Prepublication of the Groundwater Rule. Federal Register Notice. EPA-HQ-OW-2002-0061; FRL-RIN2040-AA97.
11. Yates, M.V. (2007) Classical indicators in the 21st century - far and beyond the coliform. Water Environ Res 79, 279 286.