Identification of yersinia pestis and escherichia coli strains by whole cell and outer membrane protein extracts with mass spectrometry-based proteomics

Journal of Proteome Research

Volumn 9, Issue 7, 2010, Pages 3647-3655

  Jabbour, Rabih E ^a   Wade, Mary Margaret ^b   Deshpande, Samir V ^c   Stanford, Michael F ^b   Wick, Charles H ^b   Zulich, Alan W ^b   Snyder, A Peter ^b  

^a SAIC FREDERICK INC   (United States)

^b EDGEWOOD CHEMICAL BIOLOGICAL CENTER   (United States)

^c SCIENCE AND TECHNOLOGY CORPORATION   (United States)

Author keywords

Bioinformatics; Dendrogram; E. coli; Electrospray; Liquid chromatography; Outer membrane proteins OMP; Protein extract; Proteomics; spectrometry; Tandem mass; Whole cell proteins; Yersinia pestis

Indexed keywords

BACTERIAL PROTEIN; CELL PROTEIN; OUTER MEMBRANE PROTEIN; CELL EXTRACT;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; BACTERIAL STRAIN; BACTERIAL VIRULENCE; BACTERIUM IDENTIFICATION; BIOINFORMATICS; COMPUTER PROGRAM; DATA ANALYSIS; ESCHERICHIA COLI; EXTRACTION; GRAM NEGATIVE BACTERIUM; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN ISOLATION; PROTEOMICS; STRAIN DIFFERENCE; TANDEM MASS SPECTROMETRY; ULTRACENTRIFUGATION; UNINDEXED SEQUENCE; WHOLE CELL; YERSINIA PESTIS; BIOLOGY; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; ELECTROSPRAY MASS SPECTROMETRY; ESCHERICHIA COLI O157; ISOLATION AND PURIFICATION; PROCEDURES; PROTEIN DATABASE; SPECIES DIFFERENCE;

BACTERIAL OUTER MEMBRANE PROTEINS; BACTERIAL PROTEINS; CELL EXTRACTS; CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; DATABASES, PROTEIN; ESCHERICHIA COLI O157; PROTEOMICS; SPECIES SPECIFICITY; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; TANDEM MASS SPECTROMETRY; YERSINIA PESTIS;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA; YERSINIA PESTIS;

EID: 77954379960     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr100402y     Document Type: Article

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