Genetic characterization of Raffaelea quercivora isolates collected from areas of oak wilt in Japan

Mycoscience

Volumn 51, Issue 4, 2010, Pages 310-316

  Matsuda, Yosuke ^a   Kimura, Kyoko ^a   Ito, Shin ichiro ^a  

^a MIE UNIVERSITY   (Japan)

Author keywords

Ophiostomatoid fungi; Quercus; rDNA

Indexed keywords

FUNGI; QUERCUS; RAFFAELEA QUERCIVORA;

EID: 77954244568     PISSN: 13403540     EISSN: 16182545     Source Type: Journal    
DOI: 10.1007/s10267-010-0040-0     Document Type: Article

References (39)

1. Batra LR (1967) Ambrosia fungi: a taxonomic revision and nutritional studies of some species. Mycologia 59: 979-1017.
2. Bruns TD, White TJ, Taylor JW (1991) Fungal molecular systematics. Ann Rev Ecol Syst 22: 525-564.
3. Cassar S, Blackwell M (1996) Convergent origins of ambrosia fungi. Mycologia 88: 596-601.
4. Farrell BD, Sequeira AS, O'Meara BC, Normark BB, Chung JH, Jordal BH (2001) The evolution of agriculture in beetles (Curculionidae: Scolytinae and Platypodinae). Evolution 55: 2011-2027.
5. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
6. Fraedrich SW, Harrington TC, Rabaglia RJ, Ulyshen MD, Mayfield AE, Hanula JL, Eickwort JM, Miller DR (2008) A fungal symbiont of the redbay ambrosia beetle causes a lethal wilt in redbay and other Lauraceae in the southeastern United States. Plant Dis 92: 215-224.
7. Funk A (1970) Fungal symbionts of the ambrosia beetle Gnanthotrichus sulcatus. Can J Bot 48: 1445-1448.
8. Gebhardt H, Oberwinkler F (2005) Conidial development in selected ambrosial species of the genus Raffaelea. Antonie van Leeuwenhoek 88: 61-66.
9. Gebhardt H, Begerow D, Oberwinkler F (2004) Identification of the ambrosia fungus of Xyleborus monographus and X. dryographus (Coleoptera: Curculionidae, Scolytinae). Mycol Prog 3: 95-102.
10. Gebhardt H, Weiss M, Oberwinkler F (2005) Dryadomyces amasae: a nutritional fungus associated with ambrosia beetles of the genus Amasa (Coleoptera: Curculionidae, Scolytinae). Mycol Res 109: 687-696.
11. Harrington TC, Fraedrich SW, Aghayeva DN (2008) Raffaelea lauricola, a new ambrosia beetle symbiont and pathogen on the Lauraceae. Mycotaxon 104: 399-404.
12. Hijii N, Kajimura H, Urano T, Kinuura H, Itami H (1991) The mass mortality of oak trees induced by Platypus quercivorus (Murayama) and Platypus calamus Blandford (Coleoptera: Platypodidae)-the density and spatial distribution of attack by the beetles. J Jpn For Soc 73: 471-476.
13. Ito S (2000) Mass mortality of Quercus species (Fagaceae)-mystery in symbiotic relationships between fungi and ambrosia beetle (in Japanese). Trans Nishi-Nippon Branch Mycol Soc Jpn 10: 16-22.
14. Ito S, Yamada T (1998) Distribution and spread of the mass mortality of oak trees (in Japanese). J Jpn For Soc 80: 229-232.
15. Jones KG, Blackwell M (1998) Phylogenetic analysis of ambrosial species in the genus Raffaelea based on 18S rDNA sequences. Mycol Res 102: 661-665.
16. Katoh K, Toh H (2008) Recent developments in the MAFFT multiple sequence alignment program. Brief Bioinform 9: 286-298.
17. Kinuura H, Kobayashi M (2006) Death of Quercus crispula by inoculation with adult Platypus quercivorus (Coleoptera: Platypodidae). Appl Entomol Zool 41: 123-128.
18. Kolařík M, Hulcr J (2009) Mycobiota associated with the ambrosia beetle Scolytodes unipunctatus (Coleoptera: Curculionidae, Scolytinae). Mycol Res 113: 44-60.
19. Kubono T, Ito S (2002) Raffaelea quercivora sp. nov. associated with mass mortality of Japanese oak, and the ambrosia beetle (Platypus quercivorus). Mycoscience 43: 255-260.
20. Kusaba M, Tsuge T (1995) Phylogeny of Alternaria fungi known to produce host-specific toxins on the basis of variation in internal transcribed spacer of ribosomal DNA. Curr Genet 28: 491-498.
21. Lee SB, Taylor JW (1992) Phylogeny of five fungus-like protoctistan Phytophthora species, inferred from the internal transcribed spacers of ribosomal DNA. Mol Biol Evol 9: 636-653.
22. Massoumi Alamouti S, Tsui CKM, Breuil C (2009) Multigene phylogeny of filamentous ambrosia fungi associated with ambrosia and bark beetles. Mycol Res 113: 822-835.
23. Masuya H, Wingfield MJ, Kubono T, Ichihara Y (2004) Leptographium pruni sp. nov. from bark beetle-infested Prunus jamasakura in Japan. Mycologia 96: 548-557.
24. Matsuda Y, Hijii N (1999) Characterization and Identification of Strobilomyces confusus ectomycorrhizas on Momi fir by RFLP analysis of the PCR-amplified ITS region of the rDNA. J For Res 4: 145-150.
25. Morelet M (1998) Une espèce nouvelle de Raffaelea, isolée de Platypus cylindrus, coléoptère xylomycétophage des chênes. Ann Soc Sci Nat Archeol Toulon 50: 185-193.
26. Mullineux T, Hausner G (2009) Evolution of rDNA ITS1 and ITS2 sequences and RNA secondary structures within members of the fungal genera Grosmannia and Leptographium. Fungal Genet Biol 46: 855-867.
27. Murata M, Yamada T, Ito S (2005) Changes in water status in seedlings of six species in the Fagaceae after inoculation with Raffaelea quercivora Kubono et Shin-Ito. J For Res 10: 251-255.
28. Murata M, Yamada T, Matsuda Y, Ito S (2007) Discolored and non-conductive sapwood among six Fagaceae species inoculated with Raffaelea quercivora. For Pathol 37: 73-79.
29. Nei M, Kumar S (2000) Molecular evolution and phylogenetics. Oxford University Press, New York.
30. Nilsson RH, Kristiansson E, Ryberg M, Hallenberg N, Larsson K-H (2008) Intraspecific ITS variability in the kingdom Fungi as expressed in the international sequence databases and its implications for molecular species identification. Evol Bioinform 4: 193-201.
31. O'Donnell K (1993) Fusarium and its near relatives. In: Reynolds DR, Taylor JW (eds) The Fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematic. CAB International, Wallingford, pp 225-233.
32. Ohtaka N, Masuya H, Yamaoka Y, Kaneko S (2006) Two new Ophiostoma species lacking conidial states isolated from bark beetles and bark beetle-infested Abies species in Japan. Can J Bot 84: 282-293.
33. Rollins F, Jones KG, Krokene P, Solheim H, Blackwell M (2001) Phylogeny of asexual fungi associated with bark and ambrosia beetles. Mycologia 93: 991-996.
34. Scott DB, du Toit JW (1970) Three new Raffaelea species. Trans Br Mycol Soc 55: 181-186.
35. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software, version 4. 0. Mol Biol Evol 24: 1596-1599.
36. Tsuneda A, Currah R (2006) Toward a deeper understanding of the nature of pleomorphism in conidial fungi. Rep Tottori Mycol Inst 44: 1-52.
37. White TM, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, San Diego, pp 315-321.
38. Wingfield MJ, Kendrick B, van Wyk PS (1991) Analysis of conidium ontogeny in anamorphs of Ophiostoma: Pesotum and Phialographium are synonyms of Graphium. Mycol Res 95: 1328-1333.
39. Zipfel RD, de Beer ZW, Jacobs K, Wingfield BD, Wingfield MJ (2006) Multi-gene phylogenies define Ceratocystiopsis and Grosmannia distinct from Ophiostoma. Stud Mycol 55: 75-97.