Cytochrome c oxidase subunit 1 analysis of Xiphinema diversicaudatum, X. pachtaicum, X. simile and X. vuittenezi (Nematoda, Dorylaimida)

European Journal of Plant Pathology

Volumn 127, Issue 4, 2010, Pages 493-499

  Kumari, Shesh ^a   Decraemer, Wilfrida ^b,c   de Luca, Francesca ^d   Tiefenbrunner, Wolfgang ^e  

^a CROP RESEARCH INSTITUTE   (Czech Republic)

^b ROYAL BELGIAN INSTITUTE OF NATURAL SCIENCES   (Belgium)

^c GHENT UNIVERSITY   (Belgium)

^d INSTITUTE FOR SUSTAINABLE PLANT PROTECTION   (Italy)

^e Bundesamt fuer Weinbau ^*  (Austria)

Author keywords

Czech Republic; Dagger nematode; Mitochondrial DNA

Indexed keywords

CYTOCHROME; ENZYME; GENETIC ANALYSIS; GENETIC VARIATION; MITOCHONDRIAL DNA; NEMATODE; POPULATION STRUCTURE; SPECIES DIVERSITY;

DORYLAIMIDA; NEMATODA; XIPHINEMA DIVERSICAUDATUM;

EID: 77954217017     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10658-010-9614-0     Document Type: Article

References (15)

1. Blouin, M. S., Yowell, C. A., Courtney, C. H., & Dame, J. B. (1998). Substitution bias, rapid saturation, and the use of mtDNA for nematode systematics. Molecular Biology and Evolution, 15, 1719-1727.
2. Derycke, S., Remerie, T., Vierstraete, A., Backeljau, T., Vanfleteren, J., Vincx, M., et al. (2005). Mitochondrial DNA variation and cryptic speciation within the free-living marine nematode Pellioditis marina. Marine Ecology Progress Series, 300, 91-103.
3. Derycke, S., Backeljau, T., Vlaeminck, C., Vierstraete, A., Vanfleteren, J., Vincx, M., et al. (2007). Spatiotemporal analysis of population genetic structure in Geomonhystera disjuncta (Nematoda, Monhysteridae) reveals high levels of molecular diversity. Marine Biology, 151, 1799-1812. doi: 10. 1007/s00227-007-0609-0.
4. Derycke, S., Fonseca, G., Vierstraete, A., Vanfleteren, J., Vincx, M., & Moens, T. (2008). Disentangling taxonomy within the Rhabditis (Pellioditis) marina (Nematoda, Rhabditidae) species complex using molecular and morphological tools. Zoological Journal of the Linnean Society, 152, 1-15.
5. He, Y., Jones, J., Armstrong, M., Lamberti, F., & Moens, M. (2005). The mitochondrial genome of Xiphinema americanum sensu stricto (Nematoda: Enoplea): considerable economization in the length and structural features of encoded genes. Journal of Molecular Evolution, 61, 819-833. doi: 10. 1007/s00239-005-0102-7.
6. Hu, M., & Gasser, R. B. (2006). Mitochondrial genomes of parasitic nematodes-progress and perspectives. Trends in Parasitology, 22, 78-84. doi: 10. 1016/j. pt. 2005. 12. 003.
7. Hugall, A., Stanton, J., & Mortiz, C. (1997). Evolution of the AT-rich mitochondrial DNA of the root knot nematode, Meloidogyne hapla. Molecular Biology and Evolution, 14, 40-48.
8. Kumar, S., Tamura, K., & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics, 5, 150-163.
9. Kumari, S. (2006). Xiphinema simile (Nematoda: Longidoridae) in the Czech Republic and a note on other Xiphinema species. Helminthologia, 43, 43-50.
10. Kumari, S. (2009). Morphometrics of Xiphinema dentatum Sturhan, 1978 from the Czech Republic. Helminthologia, 46, 201-204. doi: 10. 2478/s11687-009-0037-4.
11. Kumari, S., Polák, J., & Choutka, R. (2005). Plant-parasitic nematodes of the genus Xiphinema (Nematoda: Longidoridae) in the vineyards of the Czech Republic. Nematology, 7, 81-93.
12. Kumari, S., Decraemer, W., Traversa, D., & Lišková, M. (2009). Molecular and morphological delineation of Longidorus poessneckensis Altherr, 1974 (Nematoda: Dorylaimida). European Journal of Plant Pathology, 123, 125-137. doi: 10. 1007/s10658-008-9348-4.
13. Lazarova, S. S., Malloch, G., Oliveira, C. M. G., Hübschen, J., & Neilson, R. (2006). Ribosomal and mitochondrial DNA analyses of Xiphinema americanum-group populations. Journal of Nematology, 38, 404-410.
14. Otranto, D., Testini, G., De Luca, F., Hu, M., Shamsi, S., & Gasser, R. B. (2005). Analysis of genetic variability within Thelazia callipaeda (Nematoda: Thelazioidea) from Europe and Asia by sequencing and mutation scanning of the mitochondrial cytochrome c oxidase subunit 1 gene. Molecular and Cellular Probes, 19, 306-313. doi: 10. 1016/j. mcp. 2005. 05. 001.
15. Stanton, J. M., McNicol, C. D., & Steele, V. (1998). Non-manual lysis of second-stage Meloidogyne juveniles for identification of pure and mixed samples based on the polymerase chain reaction. Australasian Plant Pathology, 27, 112-115.