-
1
-
-
19944421744
-
Qua n-tifying the percent increase in minimum sample size for SNP genotyping errors in genetic model-based association studies
-
Kang S, Finch S, Haynes C, Gordon D: Qua n-tifying the percent increase in minimum sample size for SNP genotyping errors in genetic model-based association studies. Hum Hered 2004; 58: 139-144.
-
(2004)
Hum Hered
, vol.58
, pp. 139-144
-
-
Kang, S.1
Finch, S.2
Haynes, C.3
Gordon, D.4
-
2
-
-
0942276432
-
What SNP geno-typing errors are most costly for genetic association studies?
-
Kang S, Gordon D, Finch S: What SNP geno-typing errors are most costly for genetic association studies? Genet Epidemiol 20 04; 26: 132-141.
-
(2004)
Genet Epidemiol
, vol.26
, pp. 132-141
-
-
Kang, S.1
Gordon, D.2
Finch, S.3
-
3
-
-
0039245568
-
Aninvestigation of the effect of misclassification on the properties of chi-2-tests in the analysis of categorical data
-
Mote V, Anderson R: Aninvestigation of the effect of misclassification on the properties of chi-2-tests in the analysis of categorical data. Biometrika 1965; 52:95-109.
-
(1965)
Biometrika
, vol.52
, pp. 95-109
-
-
Mote, V.1
Anderson, R.2
-
4
-
-
1842859051
-
Power and sample size calculations for case-control genetic association tests when errors are present: Application to single nucleotide polymorphisms
-
Gordon D, Finch S, Nothnagel M, Ott J: Power and sample size calculations for case-control genetic association tests when errors are present: application to single nucleotide polymorphisms. Hum Hered 2002; 54:22-33.
-
(2002)
Hum Hered
, vol.54
, pp. 22-33
-
-
Gordon, D.1
Finch, S.2
Nothnagel, M.3
Ott, J.4
-
5
-
-
0035235036
-
Assessment and management of single nucleotide polymorphism genotype errors in genetic association analysis
-
Gordon D, Ott J: Assessment and management of single nucleotide polymorphism genotype errors in genetic association analysis. Pac Symp Biocomput 2001: 18-29.
-
(2001)
Pac Symp Biocomput
, pp. 18-29
-
-
Gordon, D.1
Ott, J.2
-
6
-
-
34047274759
-
The effects of SNP genotyping errors on the power of the Cochran-Armit-age linear trend test for case/control association studies
-
Ahn K, Haynes C, Kim W, Fleur R, Gordon D, Finch S: The effects of SNP genotyping errors on the power of the Cochran-Armit-age linear trend test for case/control association studies. Ann Hum Genet 2007; 71: 249-261.
-
(2007)
Ann Hum Genet
, vol.71
, pp. 249-261
-
-
Ahn, K.1
Haynes, C.2
Kim, W.3
Fleur, R.4
Gordon, D.5
Finch, S.6
-
7
-
-
30344454257
-
Characteristics of replicated single-nucleotide polymorphism genotypes from Coga: Affymetrix and Center for Inherited Disease Research
-
Tintle N, Ahn K, Mendell N, Gordon D, Finch S: Characteristics of replicated single-nucleotide polymorphism genotypes from Coga: Affymetrix and Center for Inherited Disease Research. BMC Genet 2005; 6:S154.
-
(2005)
BMC Genet
, vol.6
-
-
Tintle, N.1
Ahn, K.2
Mendell, N.3
Gordon, D.4
Finch, S.5
-
8
-
-
65449170784
-
The cost effectiveness of duplicate geno-typing for testing genetic association
-
Tintle N, Gordon D, Van Bruggen D, Finch S: The cost effectiveness of duplicate geno-typing for testing genetic association. Ann Hum Genet 2009; 73: 370-378.
-
(2009)
Ann Hum Genet
, vol.73
, pp. 370-378
-
-
Tintle, N.1
Gordon, D.2
Van Bruggen, D.3
Finch, S.4
-
9
-
-
71249150319
-
Inclusion of a priori information in genome-wide association analysis
-
Tintle N, Lantieri F, Lebrec J, Sohns M, Bal-lard D, Bickeböller H: Inclusion of a priori information in genome-wide association analysis. Genet Epidemiol 2009; 33:S74-S80.
-
(2009)
Genet Epidemiol
, vol.33
-
-
Tintle, N.1
Lantieri, F.2
Lebrec, J.3
Sohns, M.4
Bal-Lard, D.5
Bickeböller, H.6
-
10
-
-
67650954439
-
Incorporating duplicate genotype data into linear trend tests of genetic association: Methods and cost-effectiveness
-
Borchers B, Brown M, McLellan B, Bek-metjev A, Tintle N: Incorporating duplicate genotype data into linear trend tests of genetic association: methods and cost-effectiveness. Stat Appl Genet Mol Biol 2009; 8:Article 24.
-
(2009)
Stat Appl Genet Mol Biol
, vol.8
, pp. 24
-
-
Borchers, B.1
Brown, M.2
McLellan, B.3
Bek-Metjev, A.4
Tintle, N.5
-
11
-
-
33846897439
-
Using duplicate genotyped data in genetic analyses: Testing association and estimating error rates
-
Tintle N, Gordon D, McMahon F, Finch S: Using duplicate genotyped data in genetic analyses: Testing association and estimating error rates. Stat Appl Genet Mol Biol 2007; 6:Article 4.
-
(2007)
Stat Appl Genet Mol Biol
, vol.6
, pp. 4
-
-
Tintle, N.1
Gordon, D.2
McMahon, F.3
Finch, S.4
-
12
-
-
34249693630
-
A method to address differential bias in geno-typing in large-scale association studies
-
Plagnol V, Cooper J, Todd J, Clayton D: A method to address differential bias in geno-typing in large-scale association studies. PLoS Genet 2007; 3:e74.
-
(2007)
PLoS Genet
, vol.3
-
-
Plagnol, V.1
Cooper, J.2
Todd, J.3
Clayton, D.4
-
13
-
-
27644546712
-
Population structure, differential bias and genomic control in a large-scale, case-control association study
-
Clayton D, Walker N, Smyth D, Pask R, Coo-per J, Maier L, Smink L, Lam A, Ovington N, Stevens H, Nutland S, Howson J, Faham M, Moorhead M, Jones H, Falkowski M, Har-denbol P, Willis T, Todd J: Population structure, differential bias and genomic control in a large-scale, case-control association study. Nat Genet 2005; 37: 1243-124 6.
-
(2005)
Nat Genet
, vol.37
, pp. 1243-1246
-
-
Clayton, D.1
Walker, N.2
Smyth, D.3
Pask, R.4
Coo-Per, J.5
Maier, L.6
Smink, L.7
Lam, A.8
Ovington, N.9
Stevens, H.10
Nutland, S.11
Howson, J.12
Faham, M.13
Moorhead, M.14
Jones, H.15
Falkowski, M.16
Har-Denbol, P.17
Willis, T.18
Todd, J.19
-
14
-
-
33744481021
-
Effects of differential ge-notyping error rate on the type i error probability of case-control studies
-
Moskvina V, Craddock N, Holmans P, Owen M, O'Donovan M: Effects of differential ge-notyping error rate on the type I error probability of case-control studies. Hum Hered 2006; 61:55-64.
-
(2006)
Hum Hered
, vol.61
, pp. 55-64
-
-
Moskvina, V.1
Craddock, N.2
Holmans, P.3
Owen, M.4
O'Donovan, M.5
-
15
-
-
48249097794
-
No association between the SRD5A2 gene A49T missense variant and prostate cancer risk: Lessons learned
-
Pearce C, Van Den Berg D, Makridakis N, Reichardt J, Ross R, Pike M, Kolonel L, Henderson B: No association between the SRD5A2 gene A49T missense variant and prostate cancer risk: lessons learned. Hum Mol Genet 2008; 17:2456-2461.
-
(2008)
Hum Mol Genet
, vol.17
, pp. 2456-2461
-
-
Pearce, C.1
Van Den Berg, D.2
Makridakis, N.3
Reichardt, J.4
Ross, R.5
Pike, M.6
Kolonel, L.7
Henderson, B.8
-
16
-
-
61849168179
-
Impact of genotyping errors on the type i error rate and the power of haplotype-based association methods
-
Marquard V, Beckmann L, Heid I, Lamina C, Chang-Claude J: Impact of genotyping errors on the type I error rate and the power of haplotype-based association methods. BMC Genet 2009; 10:3.
-
(2009)
BMC Genet
, vol.10
, pp. 3
-
-
Marquard, V.1
Beckmann, L.2
Heid, I.3
Lamina, C.4
Chang-Claude, J.5
-
17
-
-
57449095032
-
The effects of misclassifica-tion in studies of gene-environment interactions
-
Cheng K, Lin W: The effects of misclassifica-tion in studies of gene-environment interactions. Hum Hered 2009; 67:77-87.
-
(2009)
Hum Hered
, vol.67
, pp. 77-87
-
-
Cheng, K.1
Lin, W.2
-
18
-
-
67650964051
-
Increase of rejection rate in case-control studies with the differential genotyping error rates
-
Ahn K, Gordon D, Finch S: Increase of rejection rate in case-control studies with the differential genotyping error rates. Stat Appl Genet Mol Biol 2009; 8:Article 25.
-
(2009)
Stat Appl Genet Mol Biol
, vol.8
, pp. 25
-
-
Ahn, K.1
Gordon, D.2
Finch, S.3
-
19
-
-
0033581453
-
Association of mis-sense substitution in SRD5A2 gene with prostate cancer in African-American and hispanic men in Los Angeles, USA
-
Makridakis N, Ross R, Pike M, Crocitto L, Kolonel L, Pearce C, Henderson B, Reichardt J: Association of mis-sense substitution in SRD5A2 gene with prostate cancer in African-American and hispanic men in Los Angeles, USA. Lancet 1999; 354: 975-978.
-
(1999)
Lancet
, vol.354
, pp. 975-978
-
-
Makridakis, N.1
Ross, R.2
Pike, M.3
Crocitto, L.4
Kolonel, L.5
Pearce, C.6
Henderson, B.7
Reichardt, J.8
-
20
-
-
31344461801
-
Optimal genotype determination in highly multiplexed SNP data
-
Moorhead M, Hardenbol P, Siddiqui F, Falkowski M, Bruckner C, Ireland J, Jones H, Jain M, Willis T, Faham M: Optimal genotype determination in highly multiplexed SNP data. Eur J Hum Genet 2006; 14:207-215.
-
(2006)
Eur J Hum Genet
, vol.14
, pp. 207-215
-
-
Moorhead, M.1
Hardenbol, P.2
Siddiqui, F.3
Falkowski, M.4
Bruckner, C.5
Ireland, J.6
Jones, H.7
Jain, M.8
Willis, T.9
Faham, M.10
-
21
-
-
55849140187
-
Computing power and sample size for case-control association studies with copy number polymorphism: Application of mixture-based likelihood ratio test
-
Kim W, Gordon D, Sebat J, Ye K, Finch S: Computing power and sample size for case-control association studies with copy number polymorphism: application of mixture-based likelihood ratio test. PLoS ONE 2008; 3:e3475.
-
(2008)
PLoS ONE
, vol.3
-
-
Kim, W.1
Gordon, D.2
Sebat, J.3
Ye, K.4
Finch, S.5
-
22
-
-
18544362940
-
Increasing power for tests of genetic association in the presence of phenotype and/or genotype error by use of double-sampling
-
Gordon D, Yang Y, Haynes C, Finch S, Men-dell N, Brown A, Haroutunian V: Increasing power for tests of genetic association in the presence of phenotype and/or genotype error by use of double-sampling. Stat Appl Genet Mol Biol 2004; 3:Article 26.
-
(2004)
Stat Appl Genet Mol Biol
, vol.3
, pp. 26
-
-
Gordon, D.1
Yang, Y.2
Haynes, C.3
Finch, S.4
Men-Dell, N.5
Brown, A.6
Haroutunian, V.7
-
23
-
-
84950649045
-
A double sampling scheme for estimating from binomial data with misclas-sifications
-
Tenenbein A: A double sampling scheme for estimating from binomial data with misclas-sifications. J Am Stat Assoc 1970; 65:1350-1361.
-
(1970)
J Am Stat Assoc
, vol.65
, pp. 1350-1361
-
-
Tenenbein, A.1
-
24
-
-
0015300666
-
A double sampling scheme for estimating from misclassified multinomial data with applications to sampling inspection
-
Tenenbein A: A double sampling scheme for estimating from misclassified multinomial data with applications to sampling inspection. Technometrics 1972; 14: 187-202.
-
(1972)
Technometrics
, vol.14
, pp. 187-202
-
-
Tenenbein, A.1
-
25
-
-
0002629270
-
Maximum likelihood from incomplete data via the em algorithm
-
Dempster A, Laird N, Rubin D: Maximum likelihood from incomplete data via the EM algorithm. J R Stat Soc B Met 1977; 39:1-38.
-
(1977)
J R Stat Soc B Met
, vol.39
, pp. 1-38
-
-
Dempster, A.1
Laird, N.2
Rubin, D.3
-
26
-
-
0036154960
-
Probability of detection of genotyping errors and mutations as inheritance inconsistencies in nuclear-family data
-
Douglas J, Skol A, Boehnke M: Probability of detection of genotyping errors and mutations as inheritance inconsistencies in nuclear-family data. Am J Hum Genet 2002; 70: 487-495.
-
(2002)
Am J Hum Genet
, vol.70
, pp. 487-495
-
-
Douglas, J.1
Skol, A.2
Boehnke, M.3
-
28
-
-
25444509248
-
Power and sample size calculations in the presence of phenotype errors for case/control genetic association studies
-
Edwards BJ, Haynes C, Levenstien MA, Finch SJ, Gordon D: Power and sample size calculations in the presence of phenotype errors for case/control genetic association studies. BMC Genet 20 05; 6: 18.
-
(2005)
BMC Genet
, vol.6
, pp. 18
-
-
Edwards, B.J.1
Haynes, C.2
Levenstien, M.A.3
Finch, S.J.4
Gordon, D.5
-
29
-
-
30044440451
-
Genotyping errors: Causes, consequences and solutions
-
Pompanon F, Bonin A, Bellemain E, Taberlet P: Genotyping errors: causes, consequences and solutions. Nat Rev Genet 2005; 6:847-859.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 847-859
-
-
Pompanon, F.1
Bonin, A.2
Bellemain, E.3
Taberlet, P.4
-
30
-
-
17144411157
-
Assessment of two flexible and compatible SNP genotyping platforms: Taqman SNP Genotyping Assays and the SNPlex Geno-typing System
-
Dela Vega F, Lazaruk K, Rhodes M, Wenz M: Assessment of two flexible and compatible SNP genotyping platforms: Taqman SNP Genotyping Assays and the SNPlex Geno-typing System. Mutat Res 2005; 573:111-135.
-
(2005)
Mutat Res
, vol.573
, pp. 111-135
-
-
Dela Vega, F.1
Lazaruk, K.2
Rhodes, M.3
Wenz, M.4
-
31
-
-
38049087506
-
Linear trend tests for case-control genetic association that incorporate random phenotype and genotype misclassification error
-
Gordon D, Haynes C, Yang Y, Kramer P, Finch S: Linear trend tests for case-control genetic association that incorporate random phenotype and genotype misclassification error. Genet Epidemiol 2007; 31:853-870.
-
(2007)
Genet Epidemiol
, vol.31
, pp. 853-870
-
-
Gordon, D.1
Haynes, C.2
Yang, Y.3
Kramer, P.4
Finch, S.5
|