QTLs for important breeding characteristics in the doubled haploid oat progeny

Genome

Volumn 53, Issue 6, 2010, Pages 482-493

  Tanhuanpää, Pirjo ^a   Manninen, Outi ^a   Kiviharju, Elina ^a  

^a FINNISH FOREST RESEARCH INSTITUTE   (Finland)

Author keywords

Agronomic characters; Avenasativa; DNA markers; Doubled haploid; Marker assisted selection; Quantitative trait loci

Indexed keywords

BETA GLUCAN; VEGETABLE OIL; VEGETABLE PROTEIN;

ARTICLE; ASCOMYCETES; BIOMASS; BREEDING; CHROMOSOME MAP; DIPLOIDY; GENETICS; GROWTH, DEVELOPMENT AND AGING; HAPLOIDY; INNATE IMMUNITY; METABOLISM; MICROBIOLOGY; OAT; PLANT CHROMOSOME; PLANT DISEASE; QUANTITATIVE TRAIT LOCUS; SINGLE NUCLEOTIDE POLYMORPHISM;

ASCOMYCOTA; AVENA SATIVA; BETA-GLUCANS; BIOMASS; BREEDING; CHROMOSOME MAPPING; CHROMOSOMES, PLANT; DIPLOIDY; HAPLOIDY; IMMUNITY, INNATE; PLANT DISEASES; PLANT OILS; PLANT PROTEINS; POLYMORPHISM, SINGLE NUCLEOTIDE; QUANTITATIVE TRAIT LOCI;

AVENA SATIVA; PYRENOPHORA AVENAE;

EID: 77953949742     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/G10-022     Document Type: Article

References (32)

1. Becher, R. 2007. EST-derived microsatellites as a rich source of molecular markers for oats. Plant Breed. 126(3): 274-278. doi:10.1111/j.1439-0523.2007.01330.x.
2. Branson, V., and Frey, K.J. 1989. Recurrent selection for groat oil content in oat. Crop Sci. 29: 1382-1387.
3. Campbell, A.R., and Frey, K.J. 1972. Inheritance of groat protein in interspecific oat crosses. Can. J. Plant Sci. 52(5): 735-742. doi:10.4141/cjps72-120.
4. De Koeyer, D.L., Tinker, N.A., Wight, C.P., Deyl, J., Burrows, V.D., O'Donoughue, L.S., et al. 2004. A molecular linkage map with associated QTLs from a hulless covered spring oat population. Theor. Appl. Genet. 108(7): 1285-1298. doi:10.1007/ s00122-003-1556-x. PMID:14767596.
5. Frey, K.J. 1975. Heritability of groat protein percentage of hexaploid oats. Crop Sci. 15: 277-279.
6. Gullord, M. 1986. Oil and protein contents in oats (Avena sativa L.). In Proceedings of the 2nd International Oats Conference, the University College of Wales, Welsh Plant Breeding Station, Aberystwyth, Wales, 15-18 July 1985. Edited by D.A. Lawes and H. Thomas. Martinus Nijhoff Publishers, Dordrecht, Netherlands. pp. 210-213.
7. Han, F., Ullrich, S.E., Chirat, S., Menteur, S., Jestin, L., Sarrafi, A., et al. 1995. Mapping of b-glucan content and b-glucanase activity loci in barley grain and malt. Theor. Appl. Genet. 91(91): 921-927. doi:10.1007/BF00223901.
8. Holthaus, J.F., Holland, J.B., White, P.J., and Frey, K.J. 1996. Inheritance of b-glucan content of oat grain. Crop Sci. 36: 567-572.
9. Iwig, M.M., and Ohm, H.W. 1978. Genetic control for percentage groat protein in 424 advanced generation lines from an oat cross. Crop Sci. 18: 1045-1049.
10. Jackson, E.W., Obert, D.E., Menz, M., Hu, G., and Bonman, J.M. 2008. Qualitative and quantitative trait loci conditioning resistance to Puccinia coronata pathotypes NQMG and LGCG in the oat (Avena sativa L.) cultivars Ogle and TAM O-301. Theor. Appl. Genet. 116(4): 517-527. doi:10.1007/s00122-007-0687-x. PMID:18193188.
11. Jackson, E., Jellen, E., Oliver, R., Lazo, G., Tinker, N., Rossnagel, B., et al. 2009. Resolving the oat mapping story by weaving together a consensus map. In Proceedings of the Plant and Animal Genomes XVII Conference, San Diego, Calif., 10-14 January 2009. Abstr. W337.
12. Kianian, S.F., Egli, M.A., Phillips, R.L., Rines, H.W., Somers, D.A., Gengenbach, B.G., et al. 1999. Association of a major groat oil content QTL and an acetyl-CoA carboxylase gene in oat. Theor. Appl. Genet. 98(6-7): 884-894. doi:10.1007/ s001220051147.
13. Kianian, S.F., Phillips, R.L., Rines, H.W., Fulcher, R.G., Webster, F.H., and Stuthman, D.D. 2000. Quantitative trait loci influencing b-glucan content in oat (Avena sativa, 2n = 6x = 42). Theor. Appl. Genet. 101(7): 1039-1048. doi:10.1007/ s001220051578.
14. McCleary, B.V., and Codd, R. 1991. Measurement of (1-3)(1-4)-b-D-glucan in barley and oats: a streamlined enzymic procedure. J. Sci. Food Agric. 55(2): 303-312. doi:10.1002/jsfa.2740550215.
15. Ohlrogge, J.B., and Jaworski, J.G. 1997. Regulation of fatty acid synthesis. Annu. Rev. Plant Physiol. Plant Mol. Biol. 48(1): 109-136. doi:10.1146/annurev.arplant.48.1.109. PMID: 15012259.
16. Orr, W., and Molnar, S.J. 2007. Development and mapping of PCR-based SCAR and CAPS markers linked to oil QTLs in oat. Crop Sci. 47: 848-852.
17. Orr, W., and Molnar, S.J. 2008. Development of PCR-based SCAR and CAPS markers linked to b-glucan and protein content QTL regions in oat. Genome, 51(6): 421-425. doi:10.1139/G08-026. PMID:18521120.
18. Paterson, A.H., Damon, S., Hewitt, J.D., Zamir, D., Rabinowitch, H.D., Lincoln, S.E., et al. 1991. Mendelian factors underlying quantitative traits in tomato: comparison across species, generations, and environments. Genetics, 127(1): 181-197. PMID: 1673106.
19. Paul, G., Onk, S.L., and Geiger, C. 1999. The Quaker Oats health claim: a case study. J. Diet Suppl. 1: 5-32.
20. Pillen, K., Zacharias, A., and Léon, J. 2003. Advanced backcross QTL analysis in barley (Hordeum vulgare L.). Theor. Appl. Genet. 107(2): 340-352. doi:10.1007/s00122-003-1253-9. PMID:12677407.
21. Rines, H.W., Molnar, S.J., Tinker, N.A., and Phillips, R.L. 2006. Oat. In Genome mapping and molecular breeding in plants, Cereals and millets. Vol. 1. Edited by C. Kole. Springer-Verlag, Berlin. pp. 211-242.
22. Ripsin, C.M., Keenan, J.M., Jacobs, D.R., Jr., Elmer, P.J., Welch, R.R., Van Horn, L., et al. 1992. Oat products and lipid lowering. A meta-analysis. JAMA, 267(24): 3317-3325. doi:10.1001/jama. 267.24.3317. PMID:1317928.
23. Schipper, H., and Frey, K.J. 1991. Selection for groat-oil content in oats grown in field and greenhouse. Crop Sci. 31: 661-665.
24. Tanhuanpää, P., Kalendar, R., Schulman, A.H., and Kiviharju, E. 2008. The first doubled haploid linkage map for cultivated oat. Genome, 51(8): 560-569. doi:10.1139/G08-040. PMID: 18650946.
25. Thro, A.M., and Frey, K.J. 1985. Inheritance of groat-oil content and high-oil selection in oats (Avena sativa L.). Euphytica, 34(2): 251-263. doi:10.1007/BF00022917.
26. Tinker, N.A., and Mather, D.E. 1995. MQTL: software for simplified composite interval mapping of QTL in multiple environments. J. Agric. Genomics, 1:2.
27. Tinker, N.A., Kilian, A., Wight, C.P., Heller-Uszynska, K., Wenzl, P., Rines, H.W., et al. 2009. New DArT markers for oat provide enhanced map coverage and global germplasm characterization. BMC Genomics, 10(1): 39. doi:10.1186/1471-2164-10-39. PMID:19159465.
28. Yan, W., Molnar, S.J., Fregeau-Reid, J., McElroy, A., and Tinker, N.A. 2007. Associations among oat traits and their responses to the environment. J. Crop Improv. 20(1-2): 1-29. doi:10.1300/ J411v20n01_01.
29. Youngs, V.L., and Forsberg, R.A. 1979. Protein-oil relationships in oats. Crop Sci. 19: 798-802.
30. Zhu, S., and Kaeppler, H.F. 2003. A genetic linkage map for hexa-ploid, cultivated oat (Avena sativa L.) based on an intraspecific cross 'Ogle/MAM17-5'. Theor. Appl. Genet. 107(1): 26-35. PMID:12721634.
31. Zhu, S., Kolb, F.L., and Kaeppler, H.F. 2003. Molecular mapping of genomic regions underlying barley yellow dwarf tolerance in cultivated oat (Avena sativa L.). Theor. Appl. Genet. 106(7): 1300-1306. PMID:12748782.
32. Zhu, S., Rossnagel, B.G., and Kaeppler, H.F. 2004. Genetic analysis of quantitative trait loci for groat protein and oil content in oat. Crop Sci. 44: 254-260.