Bacterial diversity in the rhizosphere of maize genotypes contrasting for phosphorus use efficiency;Diversidade bacteriana da rizosfera de genótipos de milho contrastantes na eficiência de uso de fósforo

Pesquisa Agropecuaria Brasileira

Volumn 44, Issue 11, 2009, Pages 1473-1482

  de Oliveira, Christiane Abreu ^a   Marriel, Ivanildo Evódio ^b   Gomes, Eliane Aparecida ^b   de Paula Lana, Ubiraci Gomes ^b   Scotti, Maria Rita ^a   Carvalho Alves, Vera Maria ^b  

^a FEDERAL UNIVERSITY OF MINAS GERAIS   (Brazil)

^b EMBRAPA MILHO E SORGO   (Brazil)

Author keywords

EcoPlate system; Microbial ecology; Pcr DGGE; Phosphorus deficiency; Zea mays

Indexed keywords

BACTERIA (MICROORGANISMS); ZEA MAYS;

EID: 77953736660     PISSN: 0100204X     EISSN: 16783921     Source Type: Journal    
DOI: 10.1590/s0100-204x2009001100015     Document Type: Article

References (33)

1. ALTSCHUL, S.F.; MADDEN, T.L.; SCHÄFFER, A.A.; ZHANG, J.; ZHANG, Z.; MILLER, W.; LIPMAN, D.J. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Research, v.25, p.3389-3402, 1997.
2. ALVES, V.M.C.; MAGALHÃES, J.V.; VASCONCELLOS, C.A.; NOVAIS, R.F.; BAHIA FILHO, A.F.C.; FRANÇA, G.E.; OLIVEIRA, C.A.; FRANÇA, C.C.M. Acúmulo de nitrogênio e de fósforo em plantas de milho afetadas pelo suprimento parcial de fósforo às raízes. Revista Brasileira de Ciência do Solo, v.23, p.299-305, 1999.
3. BAREA, J.-M.; POZO, M.J.; AZCÓN, R.; AZCÓN-AGUILAR, C. Microbial co-operation in the rhizosphere. Journal of Experimental Botany, v.56, p.1761-1778, 2005.
4. BAUDOIN, E.; BENIZRI, E.; GUCKERT, A. Impact of artificial root exudates on the bacterial community structure in bulk soil and maize rhizosphere. Soil Biology and Biochemistry, v.35, p.1183-1192, 2003.
5. BAUDOIN, E.; BENIZRI, E.; GUCKERT, A. Metabolic fingerprint of microbial communities from distinct maize rhizosphere compartments. European Journal of Soil Biology, v.37, p.85-93, 2001.
6. BENIZRI, E.; DEDOURGE, O.; DIBATTISTA-LEBOEUF, C.; PIUTTI, S.; NGUYEN, C.; GUCKERT, A. Effect of maize rhizodeposits on soil microbial community structure. Applied Soil Ecology, v.21, p.261-265, 2002.
7. BLAST. Basic Local Alignment Search Tool. Disponível em:. Acesso em: 15 dez. 2009.
8. BRASIL, E.C. Mecanismos envolvidos na eficiência de aquisição de fósforo em genótipos de milho. 2003. 161p. Tese (Doutorado) - Universidade Federal de Lavras, Lavras.
9. COLE, J.R.; CHAI, B.; MARSH, T.L.; FARRIS, R.J.; WANG, Q.; KULAM, S.A.; CHANDRA, S.; MCGARRELL, D.M.; SCHMIDT, T.M.; GARRITY, G.M.; TIEDJE, J.M.;, The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Research, v.31, p.442-443, 2003.
10. CRESTE, S.; TULLMAN-NETO, A.; FIGUEIRA, A. Detection of single sequence repeat polymorphisms in denaturing polyacrilamide sequencing gels by silver staining. Plant Molecular Biology Reporter, v.19, p.299-306, 2001.
11. GARLAND, J.L. Patterns of potential C source utilization by rhizosphere communities. Soil Biology and Biochemistry, v.28, p.223-230, 1996.
12. GARLAND, J.L.; MILLS, A.L. Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source utilization. Applied and Environmental Microbiology, v.57, p.2351-2359, 1991.
13. GOMES, N.C.M.; HEUER, H.; SCHÖNFELD, J.; COSTA, R.; MENDONÇA-HAGLER, L.; SMALLA, K. Bacterial diversity of the rhizosphere of maize (Zea mays) grown in tropical soil studied by temperature gradient gel electrophoresis. Plant and Soil, v.232, p.167-180, 2001.
14. GOMEZ, E.; FERRERAS, L.; TORESANI, S. Soil bacterial functional diversity as influenced by organic amendment application. Bioresource Technology, v.97, p.1484-1489, 2006.
15. GRAYSTON, S.J.; WANG, S.; CAMPBELL, C.D.; EDWARDS, A.C. Selective influence of plant species on microbial diversity in the rhizosphere. Soil Biology and Biochemistry, v.30, p.369-378, 1998.
16. HINSINGER, P. Bioavailability of soil inorganic P in the rhizosphere as affected by root-induced chemical changes: a review. Plant and Soil, v.237, p.173-195, 2001.
17. KIRK, J.L.; BEAUDETTE, L.A.; HART, M.; MOUTOGLIS, P.; KLIRONOMOS, J.N.; LEE, H.; TREVORS, J.T. Methods of studying soil microbial diversity. Journal of Microbiological Methods, v.58, p.169-188, 2004.
18. LI, Q.C.; ALLEN, H.L.; WOLLUM, A.G. Microbial biomass and bacterial functional diversity in forest soils: effects of organic matter removal, compaction, and vegetation control. Soil Biology and Biochemistry, v.36, p.571-579, 2004.
19. LIU, Y.; MI, G.; CHEN, F.; ZHANG, J.; ZHANG, F. Rhizosphere effect and root growth of two maize (Zea mays L.) genotypes with contrasting P efficiency at low P availability. Plant Science, v.167, p.217-223, 2004.
20. MARSCHNER, P.; SOLAIMAN, Z.; RENGEL, Z. Rhizosphere properties of Poaceae genotypes under P-limiting conditions. Plant and Soil, v.283, p.11-24, 2006.
21. MARSCHNER, P.; YANG, C.-H.; LIEBEREI, R.; CROWLEY, D.E. Soil and plant specific effects on bacterial community composition in the rhizosphere. Soil Biology and Biochemistry, v.33, p.1437-1445, 2001.
22. MOTA, F.F. da; GOMES, E.A.; MARRIEL, I.E.; PAIVA, E.; SELDIN, L. Bacterial and fungal communities in bulk soil and rhizospheres of aluminum-tolerant and aluminum-sensitive maize (Zea mays L.) lines cultivated in unlimed and limed Cerrado soil. Journal of Microbiology and Biotechnology, v.18, p.805-814, 2008.
23. MOTA, F.F. da; NÓBREGA, A.; MARRIEL, I.E.; PAIVA, E.; SELDIN, L. Genetic diversity of Paenibacillus polymyxa populations isolated from the rhizosphere of four cultivars of maize (Zea mays) in Cerrado soil. Applied Soil Ecology, v.20, p.119-132, 2002.
24. MUYZER, G.; DE WAAL, E.C.; UITTERLINDEN, A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Applied and Environmental Microbiology, v.59, p.695-700, 1993.
25. NANNIPIERI, P.; ASCHER, J.; CECCHERINI, M.T.; LANDI, L.; PIETRAMELLARA, G.; RENELLA, G. Microbial diversity and soil functions. European Journal of Soil Science, v.54, p.655-670, 2003.
26. NOVAIS, R.F. de; SMYTH, T.J. Fósforo em solo e planta em condições tropicais. Viçosa: UFV, 1999. 399p.
27. NÜBEL, U.; ENGELEN, B.; FELSKE, A.; SNAIDR, J.; WIESHUBER, A.; AMANN, R.I.; LUDWIG, W.; BACKHAUS, H. Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis. Journal of Bacteriology, v.178, p.5636-5643, 1996.
28. OLIVEIRA, C.A.; SÁ, N.M.H.; GOMES, E.A.; MARRIEL, I.E.; SCOTTI, M.R.; GUIMARÃES, C.T.; SCHAFFERT, R.E.; ALVES, V.M.C. Assessment of the mycorrhizal community in the rhizosphere of maize (Zea mays L.) genotypes contrasting for phosphorus efficiency in the acid savannas of Brazil using denaturing gradient gel electrophoresis (DGGE). Applied Soil Ecology, v.41, p.249-258, 2009.
29. PICARD, C.; BARUFFA, E.; BOSCO, M. Enrichment and diversity of plant-probiotic microorganisms in the rhizosphere of hybrid maize during four growth cycles. Soil Biology and Biochemistry, v.40, p.106-115, 2008.
30. PROSSER, J.I. Molecular and functional diversity in soil micro-organisms. Plant and Soil, v.244, p.9-17, 2002.
31. RICHARDSON, A.E.; BAREA, J.-M.; MCNEILL, A.M.; PRIGENT-COMBARET, C. Acquisition of phosphorus and nitrogen in the rhizosphere and plant growth promotion by microorganisms. Plant and Soil, v.321, p.305-339, 2009.
32. SILVA, K.R.A. da; SALLES, J.F.; SELDIN, L.; VAN ELSAS, J.D. Application of a novel Paenibacillus-specific PCR-DGGE method and sequence analysis to assess the diversity of Paenibacillus spp. in the maize rhizosphere. Journal of Microbiological Methods, v.54, p.213-231, 2003.
33. ZAK, J.C.; WILLING, M.R.; MOORHEAD, D.L.; WILDMAN, H.G. Functional diversity of microbial communities: a quantitative approach. Soil Biology and Biochemistry, v.26, p.1101-1108, 1994.