-
1
-
-
0036207384
-
Listening to silence and understanding nonsense: Exonic mutations that affect splicing
-
Cartegni L, Chew SL, Krainer AR. Listening to silence and understanding nonsense: exonic mutations that affect splicing. Nat Rev Genet 2002;3:285-98.
-
(2002)
Nat Rev Genet
, vol.3
, pp. 285-298
-
-
Cartegni, L.1
Chew, S.L.2
Krainer, A.R.3
-
2
-
-
26944453614
-
Splicing in action: Assessing disease causing sequence changes
-
Baralle D, Baralle M. Splicing in action: assessing disease causing sequence changes. J Med Genet 2005;42:737-48.
-
(2005)
J Med Genet
, vol.42
, pp. 737-748
-
-
Baralle, D.1
Baralle, M.2
-
3
-
-
1942467065
-
Genomic variants in exons and introns: Identifying the splicing spoilers
-
Pagani F, Baralle FE. Genomic variants in exons and introns: identifying the splicing spoilers. Nat Rev Genet 2004;5:389-96.
-
(2004)
Nat Rev Genet
, vol.5
, pp. 389-396
-
-
Pagani, F.1
Baralle, F.E.2
-
4
-
-
2142746426
-
Mutational analysis of BRCA1 and BRCA2 in Mediterranean Spanish women with early-onset breast cancer: Identification of three novel pathogenic mutations
-
Martínez-Ferrandis JI, Vega A, Chirivella I, Marín- García P, Insa A, Lluch A, Carracedo A, Chaves FJ, García-Conde J, Cervantes A, Armengod ME. Mutational analysis of BRCA1 and BRCA2 in Mediterranean Spanish women with early-onset breast cancer: identification of three novel pathogenic mutations. Hum Mutat 2003;22:417-8.
-
(2003)
Hum Mutat
, vol.22
, pp. 417-418
-
-
Martínez-Ferrandis, J.I.1
Vega, A.2
Chirivella, I.3
Marín- García, P.4
Insa, A.5
Lluch, A.6
Carracedo, A.7
Chaves, F.J.8
García-Conde, J.9
Cervantes, A.10
Armengod, M.E.11
-
5
-
-
10744232814
-
Analysis of BRCA1 and BRCA2 genes in Spanish breast/ovarian cancer patients: A high proportion of mutations unique to Spain and evidence of founder effects
-
Díez O, Osorio A, Durán M, Martinez-Ferrandis JI, de la Hoya M, Salazar R, Vega A, Campos B, Rodríguez-López R, Velasco E, Chaves J, Díaz-Rubio E, Jesús Cruz J, Torres M, Esteban E, Cervantes A, Alonso C, San Román JM, González-Sarmiento R, Miner C, Carracedo A, Eugenia Armengod M, Caldés T, Benítez J, Baiget M. Analysis of BRCA1 and BRCA2 genes in Spanish breast/ovarian cancer patients: a high proportion of mutations unique to Spain and evidence of founder effects. Hum Mutat 2003;22:301-12.
-
(2003)
Hum Mutat
, vol.22
, pp. 301-312
-
-
Díez, O.1
Osorio, A.2
Durán, M.3
Martinez-Ferrandis, J.I.4
De La Hoya, M.5
Salazar, R.6
Vega, A.7
Campos, B.8
Rodríguez-López, R.9
Velasco, E.10
Chaves, J.11
Díaz-Rubio, E.12
Jesús Cruz, J.13
Torres, M.14
Esteban, E.15
Cervantes, A.16
Alonso, C.17
San Román, J.M.18
González-Sarmiento, R.19
Miner, C.20
Carracedo, A.21
Eugenia Armengod, M.22
Caldés, T.23
Benítez, J.24
Baiget, M.25
more..
-
6
-
-
33845192319
-
The P1812A and P25T BRCA1 and the 5164del4 BRCA2 mutations: Occurrence in high-risk non-Ashkenazi Jews
-
Kaufman B, Laitman Y, Carvalho MA, Edelman L, Menachem TD, Zidan J, Monteiro AN, Friedman E. The P1812A and P25T BRCA1 and the 5164del4 BRCA2 mutations: occurrence in high-risk non-Ashkenazi Jews. Genet Test 2006;10:200-7.
-
(2006)
Genet Test
, vol.10
, pp. 200-207
-
-
Kaufman, B.1
Laitman, Y.2
Carvalho, M.A.3
Edelman, L.4
Menachem, T.D.5
Zidan, J.6
Monteiro, A.N.7
Friedman, E.8
-
7
-
-
70349469609
-
Characterization of cancer-linked BRCA1-BRCT missense variants and their interaction with phosphoprotein targets
-
Drikos I, Nounesis G, Vorgias CE. Characterization of cancer-linked BRCA1-BRCT missense variants and their interaction with phosphoprotein targets. Proteins 2009;77:464-76.
-
(2009)
Proteins
, vol.77
, pp. 464-476
-
-
Drikos, I.1
Nounesis, G.2
Vorgias, C.E.3
-
8
-
-
0042242582
-
ESEfinder: A web resource to identify exonic splicing enhancers
-
Cartegni L, Wang J, Zhu Z, Zhang MQ, Krainer AR. ESEfinder: a web resource to identify exonic splicing enhancers. Nucleic Acids Res 2003;31:3568-71.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3568-3571
-
-
Cartegni, L.1
Wang, J.2
Zhu, Z.3
Zhang, M.Q.4
Krainer, A.R.5
-
9
-
-
33747891736
-
An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers
-
Smith PJ, Zhang C, Wang J, Chew SL, Zhang MQ, Krainer AR. An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers. Hum Mol Genet 2006;15:2490-508.
-
(2006)
Hum Mol Genet
, vol.15
, pp. 2490-2508
-
-
Smith, P.J.1
Zhang, C.2
Wang, J.3
Chew, S.L.4
Zhang, M.Q.5
Krainer, A.R.6
-
10
-
-
0037047644
-
Predictive identification of exonic splicing enhancers in human genes
-
Fairbrother WG, Yeh RF, Sharp PA, Burge CB. Predictive identification of exonic splicing enhancers in human genes. Science 2002;297:1007-13.
-
(2002)
Science
, vol.297
, pp. 1007-1013
-
-
Fairbrother, W.G.1
Yeh, R.F.2
Sharp, P.A.3
Burge, C.B.4
-
11
-
-
66249120367
-
Human Splicing Finder: An online bioinformatics tool to predict splicing signals
-
Desmet FO, Hamroun D, Lalande M, Collod-Béroud G, Claustres M, Béroud C. Human Splicing Finder: an online bioinformatics tool to predict splicing signals. Nucleic Acids Res 2009;37:e67.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Desmet, F.O.1
Hamroun, D.2
Lalande, M.3
Collod-Béroud, G.4
Claustres, M.5
Béroud, C.6
-
12
-
-
47149097787
-
A large fraction of unclassified variants of the mismatch repair genes MLH1 and MSH2 is associated with splicing defects
-
Tournier I, Vezain M, Martins A, Charbonnier F, Baert-Desurmont S, Olschwang S, Wang Q, Buisine MP, Soret J, Tazi J, Frébourg T, Tosi M. A large fraction of unclassified variants of the mismatch repair genes MLH1 and MSH2 is associated with splicing defects. Hum Mutat 2008;29:1412-24.
-
(2008)
Hum Mutat
, vol.29
, pp. 1412-1424
-
-
Tournier, I.1
Vezain, M.2
Martins, A.3
Charbonnier, F.4
Baert-Desurmont, S.5
Olschwang, S.6
Wang, Q.7
Buisine, M.P.8
Soret, J.9
Tazi, J.10
Frébourg, T.11
Tosi, M.12
-
13
-
-
47149083097
-
Screening BRCA1 and BRCA2 unclassified variants for splicing mutations using reverse transcription PCR on patient RNA and an ex vivo assay based on a splicing reporter minigene
-
Bonnet C, Krieger S, Vezain M, Rousselin A, Tournier I, Martins A, Berthet P, Chevrier A, Dugast C, Layet V, Rossi A, Lidereau R, Frébourg T, Hardouin A, Tosi M. Screening BRCA1 and BRCA2 unclassified variants for splicing mutations using reverse transcription PCR on patient RNA and an ex vivo assay based on a splicing reporter minigene. J Med Genet 2008;45:438-46.
-
(2008)
J Med Genet
, vol.45
, pp. 438-446
-
-
Bonnet, C.1
Krieger, S.2
Vezain, M.3
Rousselin, A.4
Tournier, I.5
Martins, A.6
Berthet, P.7
Chevrier, A.8
Dugast, C.9
Layet, V.10
Rossi, A.11
Lidereau, R.12
Frébourg, T.13
Hardouin, A.14
Tosi, M.15
-
14
-
-
77953690065
-
Use of splicing reporter minigene assay to evaluate the effect on splicing of unclassified genetic variants
-
August "Cancer susceptibility: Methods and Protocols", Edited by Dr. Michelle Webb, HUMANA PRESS Inc., In press
-
Gaildrat P, Killian A, Martins A, Tournier I, Frébourg T, Tosi M. Use of splicing reporter minigene assay to evaluate the effect on splicing of unclassified genetic variants. METHODS IN MOLECULAR BIOLOGY: Volume 653, August 2010. "quot;Cancer susceptibility: Methods and Protocols"quot;, Edited by Dr. Michelle Webb, HUMANA PRESS Inc., In press.
-
(2010)
Methods in Molecular Biology
, vol.653
-
-
Gaildrat, P.1
Killian, A.2
Martins, A.3
Tournier, I.4
Frébourg, T.5
Tosi, M.6
-
15
-
-
2942726188
-
A new scoring system for the chances of identifying a BRCA1/2 mutation, outperforms existing models including BRCAPRO
-
Evans DGR, Eccles DM, Rahman N, Young K, Bulman M, Amir E, Shenton A, Howell A, Lalloo F. A new scoring system for the chances of identifying a BRCA1/2 mutation, outperforms existing models including BRCAPRO. J Med Genet 2004;41:474-80.
-
(2004)
J Med Genet
, vol.41
, pp. 474-480
-
-
Evans, D.G.R.1
Eccles, D.M.2
Rahman, N.3
Young, K.4
Bulman, M.5
Amir, E.6
Shenton, A.7
Howell, A.8
Lalloo, F.9
-
16
-
-
0030474170
-
Evidence for a transcriptional activation function of BRCA1 C-terminal region
-
Monteiro AN, August A, Hanafusa H. Evidence for a transcriptional activation function of BRCA1 C-terminal region. Proc Natl Acad Sci U S A 1996;93:13595-9.
-
(1996)
Proc Natl Acad Sci U S A
, vol.93
, pp. 13595-13599
-
-
Monteiro, A.N.1
August, A.2
Hanafusa, H.3
-
17
-
-
33644879468
-
Insights into the molecular basis of human hereditary breast cancer from studies of the BRCA1 BRCT domain
-
Glover JN. Insights into the molecular basis of human hereditary breast cancer from studies of the BRCA1 BRCT domain. Fam Cancer 2006;5:89-93.
-
(2006)
Fam Cancer
, vol.5
, pp. 89-93
-
-
Glover, J.N.1
-
18
-
-
68249121529
-
Missed threads. The impact of pre-mRNA splicing defects on clinical practice
-
Baralle D, Lucassen A, Buratti E. Missed threads. The impact of pre-mRNA splicing defects on clinical practice. EMBO Rep 2009;10:810-6.
-
(2009)
EMBO Rep
, vol.10
, pp. 810-816
-
-
Baralle, D.1
Lucassen, A.2
Buratti, E.3
-
19
-
-
0031981818
-
A BRCA1 nonsense mutation causes exon skipping
-
Mazoyer S, Puget N, Perrin-Vidoz L, Lynch HT, Serova-Sinilnikova OM, Lenoir GM. A BRCA1 nonsense mutation causes exon skipping. Am J Hum Genet 1998;62:713-5.
-
(1998)
Am J Hum Genet
, vol.62
, pp. 713-715
-
-
Mazoyer, S.1
Puget, N.2
Perrin-Vidoz, L.3
Lynch, H.T.4
Serova-Sinilnikova, O.M.5
Lenoir, G.M.6
-
20
-
-
0035158730
-
A mechanism for exon skipping caused by nonsense or missense mutations in BRCA1 and other genes
-
Liu HX, Cartegni L, Zhang MQ, Krainer AR. A mechanism for exon skipping caused by nonsense or missense mutations in BRCA1 and other genes. Nat Genet 2001;27:55-8.
-
(2001)
Nat Genet
, vol.27
, pp. 55-58
-
-
Liu, H.X.1
Cartegni, L.2
Zhang, M.Q.3
Krainer, A.R.4
-
21
-
-
44349135730
-
Binding of DAZAP1 and hnRNPA1/A2 to an exonic splicing silencer in a natural BRCA1 exon 18 mutant
-
Goina E, Skoko N, Pagani F. Binding of DAZAP1 and hnRNPA1/A2 to an exonic splicing silencer in a natural BRCA1 exon 18 mutant. Mol Cell Biol 2008;28:3850-60.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 3850-3860
-
-
Goina, E.1
Skoko, N.2
Pagani, F.3
-
22
-
-
77950689335
-
The c.5242C>A BRCA1 missense variant induces exon skipping by increasing splicing repressors binding
-
Millevoi S, Bernat S, Telly D, Fouque F, Gladieff L, Favre G, Vagner S, Toulas C. The c.5242C>A BRCA1 missense variant induces exon skipping by increasing splicing repressors binding. Breast Cancer Res Treat 2010;20:391-9.
-
(2010)
Breast Cancer Res Treat
, vol.20
, pp. 391-399
-
-
Millevoi, S.1
Bernat, S.2
Telly, D.3
Fouque, F.4
Gladieff, L.5
Favre, G.6
Vagner, S.7
Toulas, C.8
-
25
-
-
70350733640
-
Functional redundancy of exon 12 of BRCA2 revealed by a comprehensive analysis of the c.6853A>G (p.I2285V) variant
-
Li L, Biswas K, Habib LA, Kuznetsov SG, Hamel N, Kirchhoff T, Wong N, Armel S, Chong G, Narod SA, Claes K, Offit K, Robson ME, Stauffer S, Sharan SK, Foulkes WD. Functional redundancy of exon 12 of BRCA2 revealed by a comprehensive analysis of the c.6853A>G (p.I2285V) variant. Hum Mutat 2009;30:1543-50.
-
(2009)
Hum Mutat
, vol.30
, pp. 1543-1550
-
-
Li, L.1
Biswas, K.2
Habib, L.A.3
Kuznetsov, S.G.4
Hamel, N.5
Kirchhoff, T.6
Wong, N.7
Armel, S.8
Chong, G.9
Narod, S.A.10
Claes, K.11
Offit, K.12
Robson, M.E.13
Stauffer, S.14
Sharan, S.K.15
Foulkes, W.D.16
-
26
-
-
58349088957
-
Intronic variants in BRCA1 and BRCA2 that affect RNA splicing can be reliably selected by splice-site prediction programs
-
Vreeswijk MP, Kraan JN, Van der Klift HM, Vink GR, Cornelisse CJ, Wijnen JT, Bakker E, van Asperen CJ, Devilee P. Intronic variants in BRCA1 and BRCA2 that affect RNA splicing can be reliably selected by splice-site prediction programs. Hum Mutat 2009;30:107-14.
-
(2009)
Hum Mutat
, vol.30
, pp. 107-114
-
-
Vreeswijk, M.P.1
Kraan, J.N.2
Van Der Klift, H.M.3
Vink, G.R.4
Cornelisse, C.J.5
Wijnen, J.T.6
Bakker, E.7
Van Asperen, C.J.8
Devilee, P.9
-
27
-
-
46749098393
-
Evaluation of in silico splice tools for decision-making in molecular diagnosis
-
Houdayer C, Dehainault C, Mattler C, Michaux D, Caux-Moncoutier V, Pagès-Berhouet S, d'Enghien CD, Laugé A, Castera L, Gauthier-Villars M, Stoppa-Lyonnet D. Evaluation of in silico splice tools for decision-making in molecular diagnosis. Hum Mutat 2008;29:975-82.
-
(2008)
Hum Mutat
, vol.29
, pp. 975-982
-
-
Houdayer, C.1
Dehainault, C.2
Mattler, C.3
Michaux, D.4
Caux-Moncoutier, V.5
Pagès-Berhouet, S.6
D'Enghien, C.D.7
Laugé, A.8
Castera, L.9
Gauthier-Villars, M.10
Stoppa-Lyonnet, D.11
-
28
-
-
55549124905
-
Prediction and assessment of splicing alterations: Implications for clinical testing
-
IARC Unclassified Genetic Variants Working Group
-
Spurdle AB, Couch FJ, Hogervorst FB, Radice P, Sinilnikova OM. IARC Unclassified Genetic Variants Working Group. Prediction and assessment of splicing alterations: implications for clinical testing. Hum Mutat 2008;29:1304-13.
-
(2008)
Hum Mutat
, vol.29
, pp. 1304-1313
-
-
Spurdle, A.B.1
Couch, F.J.2
Hogervorst, F.B.3
Radice, P.4
Sinilnikova, O.M.5
-
29
-
-
34447620058
-
Evolutionary conservation analysis increases the colocalization of predicted exonic splicing enhancers in the BRCA1 gene with missense sequence changes and in-frame deletions, but not polymorphisms
-
Pettigrew C, Wayte N, Lovelock PK, Tavtigian SV, Chenevix-Trench G, Spurdle AB, Brown MA. Evolutionary conservation analysis increases the colocalization of predicted exonic splicing enhancers in the BRCA1 gene with missense sequence changes and in-frame deletions, but not polymorphisms. Breast Cancer Res 2005;7: R929-39.
-
(2005)
Breast Cancer Res
, vol.7
-
-
Pettigrew, C.1
Wayte, N.2
Lovelock, P.K.3
Tavtigian, S.V.4
Chenevix-Trench, G.5
Spurdle, A.B.6
Brown, M.A.7
-
30
-
-
44849136457
-
Colocalisation of predicted exonic splicing enhancers in BRCA2 with reported sequence variants
-
Pettigrew CA, Wayte N, Wronski A, Lovelock PK, Spurdle AB, Brown MA. Colocalisation of predicted exonic splicing enhancers in BRCA2 with reported sequence variants. Breast Cancer Res Treat 2008;110:227-34.
-
(2008)
Breast Cancer Res Treat
, vol.110
, pp. 227-234
-
-
Pettigrew, C.A.1
Wayte, N.2
Wronski, A.3
Lovelock, P.K.4
Spurdle, A.B.5
Brown, M.A.6
-
31
-
-
41349117601
-
Unclassified variants identified in BRCA1 exon 11: Consequences on splicing
-
Anczuków O, Buisson M, Salles MJ, Triboulet S, Longy M, Lidereau R, Sinilnikova OM, Mazoyer S. Unclassified variants identified in BRCA1 exon 11: Consequences on splicing. Genes Chromosomes Cancer 2008;47:418-26.
-
(2008)
Genes Chromosomes Cancer
, vol.47
, pp. 418-426
-
-
Anczuków, O.1
Buisson, M.2
Salles, M.J.3
Triboulet, S.4
Longy, M.5
Lidereau, R.6
Sinilnikova, O.M.7
Mazoyer, S.8
-
32
-
-
55549101314
-
Sequence variant classification and reporting: Recommendations for improving the interpretation of cancer susceptibility genetic test results
-
IARC Unclassified Genetic Variants Working Group
-
Plon SE, Eccles DM, Easton D, Foulkes WD, Genuardi M, Greenblatt MS, Hogervorst FB, Hoogerbrugge N, Spurdle AB, Tavtigian SV. IARC Unclassified Genetic Variants Working Group. Sequence variant classification and reporting: recommendations for improving the interpretation of cancer susceptibility genetic test results. Hum Mutat 2008;29:1282-91.
-
(2008)
Hum Mutat
, vol.29
, pp. 1282-1291
-
-
Plon, S.E.1
Eccles, D.M.2
Easton, D.3
Foulkes, W.D.4
Genuardi, M.5
Greenblatt, M.S.6
Hogervorst, F.B.7
Hoogerbrugge, N.8
Spurdle, A.B.9
Tavtigian, S.V.10
|