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Volumn 8, Issue 3, 2010, Pages 579-591

Statistical comparison of methods to estimate the error probability in short-read illumina sequencing

Author keywords

Error probability; Next generation sequencing; Quality value; Statistical measures

Indexed keywords

ALGORITHM; ARTICLE; ARTIFACT; CHROMOSOME MAP; COMPARATIVE STUDY; COMPUTER PROGRAM; DNA SEQUENCE; METHODOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; STATISTICAL ANALYSIS;

EID: 77953666698     PISSN: 02197200     EISSN: None     Source Type: Journal    
DOI: 10.1142/S021972001000463X     Document Type: Conference Paper
Times cited : (10)

References (9)
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    • Ewing, B.1    Green, P.2
  • 2
    • 43149107930 scopus 로고    scopus 로고
    • Quality scores and SNP detection in sequencing-by-synthesis systems
    • Brockman W et al., Quality scores and SNP detection in sequencing-by-synthesis systems, Genome Res 18:763-770, 2008.
    • (2008) Genome Res , vol.18 , pp. 763-770
    • Brockman, W.1
  • 3
    • 38749091304 scopus 로고    scopus 로고
    • Pyrobayes: An improved base caller for SNP discovery in pyrosequences
    • Quinlan AR, Stewart DA, Stromberg MP, Marth GT, Pyrobayes: an improved base caller for SNP discovery in pyrosequences, Nat Methods 5:179-181, 2008.
    • (2008) Nat Methods , vol.5 , pp. 179-181
    • Quinlan, A.R.1    Stewart, D.A.2    Stromberg, M.P.3    Marth, G.T.4
  • 4
    • 0028279574 scopus 로고
    • Assignment of position-specific error probability to primary DNA sequence data
    • Lawrence CB, Solovyev VV, Assignment of position-specific error probability to primary DNA sequence data, Nucleic Acids Res 22:1272-1280, 1994.
    • (1994) Nucleic Acids Res , vol.22 , pp. 1272-1280
    • Lawrence, C.B.1    Solovyev, V.V.2
  • 7
    • 48449094744 scopus 로고    scopus 로고
    • Alta-cyclic: A selfoptimizing base caller for next-generation sequencing
    • July
    • Erlich Y, Mitra PP, Delabastide M, Mccombie RW, Hannon GJ, Alta-cyclic: a selfoptimizing base caller for next-generation sequencing, Nature Methods 5(8):679-682, July 2008.
    • (2008) Nature Methods , vol.5 , Issue.8 , pp. 679-682
    • Erlich, Y.1    Mitra, P.P.2    Delabastide, M.3    McCombie, R.W.4    Hannon, G.J.5
  • 9
    • 0017367852 scopus 로고
    • Nucleotide sequence of bacteriophage phi X174 DNA
    • Sanger F et al., Nucleotide sequence of bacteriophage phi X174 DNA, Nature 265:687-695 (1977).
    • (1977) Nature , vol.265 , pp. 687-695
    • Sanger, F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.