메뉴 건너뛰기




Volumn 30, Issue 13, 2010, Pages 3216-3232

Histone H2B C-terminal helix mediates trans-histone H3K4 methylation independent of H2B ubiquitination

Author keywords

[No Author keywords available]

Indexed keywords

ARGININE; HISTONE; HISTONE H2B; HISTONE H2BK123; HISTONE H3K4; HISTONE H3K79; METHYLTRANSFERASE; MULTIPROTEIN COMPLEX; THREONINE; UNCLASSIFIED DRUG;

EID: 77953400995     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.01008-09     Document Type: Article
Times cited : (34)

References (55)
  • 1
    • 0024295412 scopus 로고
    • Chromosomal ARS and CEN elements bind specifically to the yeast nuclear scaffold
    • Amati, B. B., and S. M. Gasser. 1988. Chromosomal ARS and CEN elements bind specifically to the yeast nuclear scaffold. Cell 54:967-978.
    • (1988) Cell , vol.54 , pp. 967-978
    • Amati, B.B.1    Gasser, S.M.2
  • 2
    • 34249299791 scopus 로고    scopus 로고
    • The complex language of chromatin regulation during transcription
    • DOI 10.1038/nature05915, PII NATURE05915
    • Berger, S. L. 2007. The complex language of chromatin regulation during transcription. Nature 447:407-412. (Pubitemid 46816746)
    • (2007) Nature , vol.447 , Issue.7143 , pp. 407-412
    • Berger, S.L.1
  • 4
    • 70349731733 scopus 로고    scopus 로고
    • Ubiquitination of histone H2B regulates chromatin dynamics by enhancing nucleosome stability
    • Chandrasekharan, M. B., F. Huang, and Z. W. Sun. 2009. Ubiquitination of histone H2B regulates chromatin dynamics by enhancing nucleosome stability. Proc. Natl. Acad. Sci. U. S. A. 106:16686-16691.
    • (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 16686-16691
    • Chandrasekharan, M.B.1    Huang, F.2    Sun, Z.W.3
  • 7
    • 3042522654 scopus 로고    scopus 로고
    • Chromatin dynamics at DNA replication, transcription and repair
    • Ehrenhofer-Murray, A. E. 2004. Chromatin dynamics at DNA replication, transcription and repair. Eur. J. Biochem. 271:2335-2349.
    • (2004) Eur. J. Biochem. , vol.271 , pp. 2335-2349
    • Ehrenhofer-Murray, A.E.1
  • 8
    • 23344438897 scopus 로고    scopus 로고
    • Global loss of Set1-mediated H3 Lys4 trimethylation is associated with silencing defects in Saccharomyces cerevisiae
    • Fingerman, I. M., C. L. Wu, B. D. Wilson, and S. D. Briggs. 2005. Global loss of Set1-mediated H3 Lys4 trimethylation is associated with silencing defects in Saccharomyces cerevisiae. J. Biol. Chem. 280:28761-28765.
    • (2005) J. Biol. Chem. , vol.280 , pp. 28761-28765
    • Fingerman, I.M.1    Wu, C.L.2    Wilson, B.D.3    Briggs, S.D.4
  • 9
    • 34547949573 scopus 로고    scopus 로고
    • A charge-based interaction between histone H4 and Dot1 is required for H3K79 methylation and telomere silencing: Identification of a new trans-histone pathway
    • Fingerman, I. M., H. C. Li, and S. D. Briggs. 2007. A charge-based interaction between histone H4 and Dot1 is required for H3K79 methylation and telomere silencing: identification of a new trans-histone pathway. Genes Dev. 21:2018-2029.
    • (2007) Genes Dev. , vol.21 , pp. 2018-2029
    • Fingerman, I.M.1    Li, H.C.2    Briggs, S.D.3
  • 10
    • 58149151514 scopus 로고    scopus 로고
    • Controlling histone methylation via trans-histone pathways
    • Fingerman, I. M., H. N. Du, and S. D. Briggs. 2008. Controlling histone methylation via trans-histone pathways. Epigenetics 35:237-242.
    • (2008) Epigenetics , vol.35 , pp. 237-242
    • Fingerman, I.M.1    Du, H.N.2    Briggs, S.D.3
  • 11
    • 64749090812 scopus 로고    scopus 로고
    • Methylation of H3 K4 and K79 is not strictly dependent on H2B K123 ubiquitylation
    • Foster, E. R., and J. A. Downs. 2009. Methylation of H3 K4 and K79 is not strictly dependent on H2B K123 ubiquitylation. J. Cell Biol. 184:631-638.
    • (2009) J. Cell Biol. , vol.184 , pp. 631-638
    • Foster, E.R.1    Downs, J.A.2
  • 13
    • 28844499047 scopus 로고    scopus 로고
    • Production of antipolyubiquitin monoclonal antibodies and their use for characterization and isolation of polyubiquitinated proteins
    • DOI 10.1016/S0076-6879(05)99006-X, PII S007668790599006X, 6, Ubiquitin and Protein Degradation, Part B
    • Fujimuro, M., and H. Yokosawa. 2005. Production of antipolyubiquitin monoclonal antibodies and their use for characterization and isolation of polyubiquitinated proteins. Methods Enzymol. 399:75-86. (Pubitemid 41772723)
    • (2005) Methods in Enzymology , vol.399 , pp. 75-86
    • Fujimuro, M.1    Yokosawa, H.2
  • 14
    • 21744433162 scopus 로고    scopus 로고
    • Ubp10/Dot4p regulates the persistence of ubiquitinated histone H2B: Distinct roles in telomeric silencing and general chromatin
    • Gardner, R. G., Z. W. Nelson, and D. E. Gottschling. 2005. Ubp10/Dot4p regulates the persistence of ubiquitinated histone H2B: distinct roles in telomeric silencing and general chromatin. Mol. Cell. Biol. 25:6123-6139.
    • (2005) Mol. Cell. Biol. , vol.25 , pp. 6123-6139
    • Gardner, R.G.1    Nelson, Z.W.2    Gottschling, D.E.3
  • 15
    • 0035016612 scopus 로고    scopus 로고
    • Interactions of Isw2 chromatin remodeling complex with nucleosomal arrays: Analyses using recombinant yeast histones and immobilized templates
    • Gelbart, M. E., T. Rechsteiner, T. J. Richmond, and T. Tsukiyama. 2001. Interactions of Isw2 chromatin remodeling complex with nucleosomal arrays: analyses using recombinant yeast histones and immobilized templates. Mol. Cell. Biol. 21:2098-20106.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 2098-20106
    • Gelbart, M.E.1    Rechsteiner, T.2    Richmond, T.J.3    Tsukiyama, T.4
  • 16
    • 0036312462 scopus 로고    scopus 로고
    • Trans-tail histone modifications: Wedge and bridge?
    • Henry, K. W., and S. L. Berger. 2002. Trans-tail histone modifications: wedge and bridge? Nat. Struct. Biol. 9:565-566.
    • (2002) Nat. Struct. Biol. , vol.9 , pp. 565-566
    • Henry, K.W.1    Berger, S.L.2
  • 19
    • 33846663256 scopus 로고    scopus 로고
    • Continuous Histone H2B and Transcription-Dependent Histone H3 Exchange in Yeast Cells outside of Replication
    • DOI 10.1016/j.molcel.2007.01.019, PII S1097276507000421
    • Jamai, A., R. M. Imoberdorf, and M. Strubin. 2007. Continuous histone H2B and transcription-dependent histone H3 exchange in yeast cells outside of replication. Mol. Cell 25:345-355. (Pubitemid 46199292)
    • (2007) Molecular Cell , vol.25 , Issue.3 , pp. 345-355
    • Jamai, A.1    Imoberdorf, R.M.2    Strubin, M.3
  • 21
    • 0032775010 scopus 로고    scopus 로고
    • Epitope tagging of yeast genes using a PCR-based strategy: More tags and improved practical routines
    • Knop, M., K. Siegers, G. Pereira, W. Zachariae, B. Winsor, K. Nasmyth, and E. Schiebel. 1999. Epitope tagging of yeast genes using a PCR-based strategy: more tags and improved practical routines. Yeast 15:963-972.
    • (1999) Yeast , vol.15 , pp. 963-972
    • Knop, M.1    Siegers, K.2    Pereira, G.3    Zachariae, W.4    Winsor, B.5    Nasmyth, K.6    Schiebel, E.7
  • 22
    • 0033529565 scopus 로고    scopus 로고
    • Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome
    • Kornberg, R. D., and Y. Lorch. 1999. Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome. Cell 98:285-294.
    • (1999) Cell , vol.98 , pp. 285-294
    • Kornberg, R.D.1    Lorch, Y.2
  • 23
    • 33847076849 scopus 로고    scopus 로고
    • Chromatin modifications and their function
    • Kouzarides, T. 2007. Chromatin modifications and their function. Cell 128: 693-705.
    • (2007) Cell , vol.128 , pp. 693-705
    • Kouzarides, T.1
  • 24
    • 23944445861 scopus 로고    scopus 로고
    • BUR kinase selectively regulates H3 K4 trimethylation and H2B ubiquitylation through recruitment of the PAF elongation complex
    • Laribee, R. N., N. J. Krogan, T. Xiao, Y. Shibata, T. R. Hughes, J. F. Greenblatt, and B. D. Strahl. 2005. BUR kinase selectively regulates H3 K4 trimethylation and H2B ubiquitylation through recruitment of the PAF elongation complex. Curr. Biol. 1516:1487-1493.
    • (2005) Curr. Biol. , vol.1516 , pp. 1487-1493
    • Laribee, R.N.1    Krogan, N.J.2    Xiao, T.3    Shibata, Y.4    Hughes, T.R.5    Greenblatt, J.F.6    Strahl, B.D.7
  • 25
    • 35848936709 scopus 로고    scopus 로고
    • Cross-regulation of histone modifications
    • Latham, J. A., and S. Y. R. Dent. 2007. Cross-regulation of histone modifications. Nat. Struct. Mol. Biol. 14:1017-1024.
    • (2007) Nat. Struct. Mol. Biol. , vol.14 , pp. 1017-1024
    • Latham, J.A.1    Dent, S.Y.R.2
  • 27
    • 33847070442 scopus 로고    scopus 로고
    • The role of chromatin during transcription
    • Li, B., M. Carey, and J. L. Workman. 2007. The role of chromatin during transcription. Cell 128:707-719.
    • (2007) Cell , vol.128 , pp. 707-719
    • Li, B.1    Carey, M.2    Workman, J.L.3
  • 28
    • 0031455421 scopus 로고    scopus 로고
    • Persistent initiation of DNA replication and chromatin-bound MCM proteins during the cell cycle in cdc6 mutants
    • Liang, C., and B. Stillman. 1997. Persistent initiation of DNA replication and chromatin-bound MCM proteins during the cell cycle in cdc6 mutants. Genes Dev. 11:3375-3386. (Pubitemid 28024028)
    • (1997) Genes and Development , vol.11 , Issue.24 , pp. 3375-3386
    • Liang, C.1    Stillman, B.2
  • 29
    • 44849100496 scopus 로고    scopus 로고
    • Chemically ubiquitylated histone H2B stimulates hDot1L-mediated intranucleosomal methylation
    • McGinty, R. K., J. Kim, C. Chatterjee, R. G. Roeder, and T. W. Muir. 2008. Chemically ubiquitylated histone H2B stimulates hDot1L-mediated intranucleosomal methylation. Nature 453:812-816.
    • (2008) Nature , vol.453 , pp. 812-816
    • McGinty, R.K.1    Kim, J.2    Chatterjee, C.3    Roeder, R.G.4    Muir, T.W.5
  • 30
    • 55549090739 scopus 로고    scopus 로고
    • On your MARKS, get SET, METHYLATE!
    • Mellor, J. 2008. On your MARKS, get SET, METHYLATE! Nat. Cell Biol. 10:1249-1250.
    • (2008) Nat. Cell Biol. , vol.10 , pp. 1249-1250
    • Mellor, J.1
  • 31
    • 33745373572 scopus 로고    scopus 로고
    • The requirements for COMPASS and Paf1 in transcriptional silencing and methylation of histone H3 in Saccharomyces cerevisiae
    • Mueller, J. E., M. Canze, and M. Bryk. 2006. The requirements for COMPASS and Paf1 in transcriptional silencing and methylation of histone H3 in Saccharomyces cerevisiae. Genetics 173:557-567.
    • (2006) Genetics , vol.173 , pp. 557-567
    • Mueller, J.E.1    Canze, M.2    Bryk, M.3
  • 34
    • 0037144393 scopus 로고    scopus 로고
    • Ubiquitination of histone H2B by Rad6 is required for efficient Dot1-mediated methylation of histone H3 lysine 79
    • Ng, H. H., R. M. Xu, Y. Zhang, and K. Struhl. 2002. Ubiquitination of histone H2B by Rad6 is required for efficient Dot1-mediated methylation of histone H3 lysine 79. J. Biol. Chem. 277:34655-34657.
    • (2002) J. Biol. Chem. , vol.277 , pp. 34655-34657
    • Ng, H.H.1    Xu, R.M.2    Zhang, Y.3    Struhl, K.4
  • 35
    • 33845254071 scopus 로고    scopus 로고
    • Histone ubiquitylation and the regulation of transcription
    • Osley, M. A., A. B. Fleming, and C. F. Kao. 2006. Histone ubiquitylation and the regulation of transcription. Results Probl. Cell Differ. 41:47-75.
    • (2006) Results Probl. Cell Differ. , vol.41 , pp. 47-75
    • Osley, M.A.1    Fleming, A.B.2    Kao, C.F.3
  • 36
    • 0025787384 scopus 로고
    • Yeast nucleosomal particles: Structural and transcriptional properties
    • Piñeiro, M., C. Puerta, and E. Palacián. 1991. Yeast nucleosomal particles: structural and transcriptional properties. Biochemistry 30:5805-5810.
    • (1991) Biochemistry , vol.30 , pp. 5805-5810
    • Piñeiro, M.1    Puerta, C.2    Palacián, E.3
  • 38
    • 64549083597 scopus 로고    scopus 로고
    • Sem1p and Ubp6p orchestrate telomeric silencing by modulating histone H2B ubiquitination and H3 acetylation
    • Qin, S., Q. Wang, A. Ray, G. Wani, Q. Zhao, S. R. Bhaumik, and A. A. Wani. 2009. Sem1p and Ubp6p orchestrate telomeric silencing by modulating histone H2B ubiquitination and H3 acetylation. Nucleic Acids Res. 37:1843-1853.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 1843-1853
    • Qin, S.1    Wang, Q.2    Ray, A.3    Wani, G.4    Zhao, Q.5    Bhaumik, S.R.6    Wani, A.A.7
  • 39
    • 0034695456 scopus 로고    scopus 로고
    • Rad6-dependent ubiquitination of histone H2B in yeast
    • Robzyk, K., J. Recht, and M. A. Osley. 2000. Rad6-dependent ubiquitination of histone H2B in yeast. Science 287:501-504.
    • (2000) Science , vol.287 , pp. 501-504
    • Robzyk, K.1    Recht, J.2    Osley, M.A.3
  • 40
    • 0037126594 scopus 로고    scopus 로고
    • The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4
    • DOI 10.1093/emboj/20.24.7137
    • Roguev, A., D. Schaft, A. Shevchenko, W. W. Pijnappel, M. Wilm, R. Aasland, and A. F. Stewart. 2001. The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4. EMBO J. 20:7137-7148. (Pubitemid 34062305)
    • (2001) EMBO Journal , vol.20 , Issue.24 , pp. 7137-7148
    • Roguev, A.1    Schaft, D.2    Shevchenko, A.3    Pijnappel, W.W.M.P.4    Wilm, M.5    Aasland, R.6    Stewart, A.F.7
  • 41
    • 36448949026 scopus 로고    scopus 로고
    • Multivalent engagement of chromatin modifications by linked binding modules
    • Ruthenburg, A. J., H. Li, D. J. Patel, and C. D. Allis. 2007. Multivalent engagement of chromatin modifications by linked binding modules. Nat. Rev. Mol. Cell Biol. 8:983-994.
    • (2007) Nat. Rev. Mol. Cell Biol. , vol.8 , pp. 983-994
    • Ruthenburg, A.J.1    Li, H.2    Patel, D.J.3    Allis, C.D.4
  • 42
    • 17144365769 scopus 로고    scopus 로고
    • Histone trimethylation by Set1 is coordinated by the RRM, autoinhibitory, and catalytic domains
    • DOI 10.1038/sj.emboj.7600607
    • Schlichter, A., and B. R. Cairns. 2005. Histone trimethylation by Set1 is coordinated by the RRM, autoinhibitory, and catalytic domains. EMBO J. 24:1222-1231. (Pubitemid 40516605)
    • (2005) EMBO Journal , vol.24 , Issue.6 , pp. 1222-1231
    • Schlichter, A.1    Cairns, B.R.2
  • 44
    • 22544461653 scopus 로고    scopus 로고
    • Histone H2B ubiquitylation controls processive methylation but not monomethylation by Dot1 and Set1
    • Shahbazian, M. D., K. Zhang, and M. Grunstein. 2005. Histone H2B ubiquitylation controls processive methylation but not monomethylation by Dot1 and Set1. Mol. Cell 192:271-277.
    • (2005) Mol. Cell , vol.192 , pp. 271-277
    • Shahbazian, M.D.1    Zhang, K.2    Grunstein, M.3
  • 45
    • 33746324216 scopus 로고    scopus 로고
    • Chromatin modifications by methylation and ubiquitination: Implications in the regulation of gene expression
    • Shilatifard, A. 2006. Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression. Annu. Rev. Biochem. 75:243-269.
    • (2006) Annu. Rev. Biochem. , vol.75 , pp. 243-269
    • Shilatifard, A.1
  • 46
    • 33646248115 scopus 로고    scopus 로고
    • Ubp8p, a histone deubiquitinase whose association with SAGA is mediated by Sgf11p, differentially regulates lysine 4 methylation of histone H3 in vivo
    • Shukla, A., N. Stanojevic, Z. Duan, P. Sen, and S. R. Bhaumik. 2006. Ubp8p, a histone deubiquitinase whose association with SAGA is mediated by Sgf11p, differentially regulates lysine 4 methylation of histone H3 in vivo. Mol. Cell. Biol. 269:3339-3352.
    • (2006) Mol. Cell. Biol. , vol.269 , pp. 3339-3352
    • Shukla, A.1    Stanojevic, N.2    Duan, Z.3    Sen, P.4    Bhaumik, S.R.5
  • 47
    • 73649141301 scopus 로고    scopus 로고
    • A conserved interaction between the SDI domain of Bre2 and the Dpy-30 domain of Sdc1 is required for histone methylation and gene expression
    • South, P. F., I. M. Fingerman, D. P. Mersman, H. N. Du, and Briggs, S. D. 2010. A conserved interaction between the SDI domain of Bre2 and the Dpy-30 domain of Sdc1 is required for histone methylation and gene expression. J. Biol. Chem. 285:595-607.
    • (2010) J. Biol. Chem. , vol.285 , pp. 595-607
    • South, P.F.1    Fingerman, I.M.2    Mersman, D.P.3    Du, H.N.4    Briggs, S.D.5
  • 48
    • 0032814843 scopus 로고    scopus 로고
    • A general requirement for the Sin3-Rpd3 histone deacetylase complex in regulating silencing in Saccharomyces cerevisiae
    • Sun, Z. W., and M. Hampsey. 1999. A general requirement for the Sin3-Rpd3 histone deacetylase complex in regulating silencing in Saccharomyces cerevisiae. Genetics 152:921-932.
    • (1999) Genetics , vol.152 , pp. 921-932
    • Sun, Z.W.1    Hampsey, M.2
  • 49
    • 0037019333 scopus 로고    scopus 로고
    • Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast
    • Sun, Z. W., and C. D. Allis. 2002. Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast. Nature 418:104-108.
    • (2002) Nature , vol.418 , pp. 104-108
    • Sun, Z.W.1    Allis, C.D.2
  • 50
    • 67650091137 scopus 로고    scopus 로고
    • Regulation of H3K4 Trimethylation via Cps40 (Spp1) of COMPASS is monoubiquitination independent: Implication for a Phe/Tyr switch by the catalytic domain of Set1
    • Takahashi, Y. H., J. S. Lee, S. K. Swanson, A. Saraf, L. Florens, M. P. Washburn, R. C. Trievel, and A. Shilatifard. 2009. Regulation of H3K4 Trimethylation via Cps40 (Spp1) of COMPASS is monoubiquitination independent: implication for a Phe/Tyr switch by the catalytic domain of Set1. Mol. Cell. Biol. 29:3478-3486.
    • (2009) Mol. Cell. Biol. , vol.29 , pp. 3478-3486
    • Takahashi, Y.H.1    Lee, J.S.2    Swanson, S.K.3    Saraf, A.4    Florens, L.5    Washburn, M.P.6    Trievel, R.C.7    Shilatifard, A.8
  • 51
    • 65149084552 scopus 로고    scopus 로고
    • Crosstalk between histone modifications during the DNA damage response
    • van Attikum, H., and S. M. Gasser. 2009. Crosstalk between histone modifications during the DNA damage response. Trends Cell Biol. 19:207-217.
    • (2009) Trends Cell Biol. , vol.19 , pp. 207-217
    • Van Attikum, H.1    Gasser, S.M.2
  • 52
  • 53
    • 40849106789 scopus 로고    scopus 로고
    • Histone ubiquitination: Triggering gene activity
    • Weake, V. M., and J. L. Workman. 2008. Histone ubiquitination: triggering gene activity. Mol. Cell 29:653-663.
    • (2008) Mol. Cell , vol.29 , pp. 653-663
    • Weake, V.M.1    Workman, J.L.2
  • 54
    • 0035903534 scopus 로고    scopus 로고
    • Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions
    • White, C. L., R. K. Suto, and K. Luger. 2001. Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions. EMBO J. 20:5207-5218.
    • (2001) EMBO J. , vol.20 , pp. 5207-5218
    • White, C.L.1    Suto, R.K.2    Luger, K.3
  • 55
    • 20444417108 scopus 로고    scopus 로고
    • WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development
    • DOI 10.1016/j.cell.2005.03.036, PII S0092867405003557
    • Wysocka, J., T. Swigut, T. A. Milne, Y. Dou, X. Zhang, A. L. Burlingame, R. G. Roeder, A. H. Brivanlou, and C. D. Allis. 2005. WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development. Cell 121:859-872. (Pubitemid 40806418)
    • (2005) Cell , vol.121 , Issue.6 , pp. 859-872
    • Wysocka, J.1    Swigut, T.2    Milne, T.A.3    Dou, Y.4    Zhang, X.5    Burlingame, A.L.6    Roeder, R.G.7    Brivanlou, A.H.8    Allis, C.D.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.