Georgenia halophila sp. nov., a halophilic actinobacterium isolated from a salt lake

International Journal of Systematic and Evolutionary Microbiology

Volumn 60, Issue 6, 2010, Pages 1317-1321

  Tang, Shu Kun ^a   Wang, Yun ^b   Lee, Jae Chan ^c   Lou, Kai ^b   Park, Dong Jin ^c   Kim, Chang Jin ^c   Li, Wen Jun ^a  

^a YUNNAN UNIVERSITY   (China)

^b INSTITUTE OF MICROBIOLOGY   (China)

^c Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ALANINE; CARDIOLIPIN; DIAMINO ACID; GLUTAMINE; GLYCOLIPID; LYSINE; MENAQUINONE; PEPTIDOGLYCAN; PEPTIDOGLYCAN TYPE A4ALPHA; PHOSPHATIDYLGLYCEROL; PHOSPHATIDYLINOSITOL; PHOSPHATIDYLINOSITOL MANNOSIDE; PHOSPHOLIPID; PHOSPHOLIPID DERIVATIVE; RNA 16S; SODIUM CHLORIDE; UNCLASSIFIED DRUG;

ACTINOBACTERIA; ARTICLE; BACTERIAL CELL WALL; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATION; CHEMOTAXONOMY; DNA CONTENT; FATTY ACID ANALYSIS; GENE SEQUENCE; GEORGENIA HALOPHILA YIM 93316; NONHUMAN; NUCLEOTIDE SEQUENCE; PH MEASUREMENT; PHYLOGENETIC TREE; PRIORITY JOURNAL; SALT LAKE; STRAIN DIFFERENCE;

ACTINOBACTERIA; ALANINE; CHINA; DNA, BACTERIAL; ESTERASES; FRESH WATER; GLUTAMINE; GLYCOSIDE HYDROLASES; LYSINE; MOLECULAR SEQUENCE DATA; PHENOTYPE; PHYLOGENY; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SODIUM CHLORIDE; SOIL MICROBIOLOGY;

GEORGENIA; GEORGENIA MURALIS; HALOPHILA;

EID: 77953308613     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.014993-0     Document Type: Article

References (22)

1. Altenburger, P., Kämpfer, P., Schumann, P., Vybiral, D., Lubitz, W. & Busse, H.-J. (2002). Georgenia muralis gen. nov., sp. nov., a novel actinobacterium isolated from a medieval wall painting. Int J Syst Evol Microbiol 52, 875-881. (Pubitemid 34591214)
2. Cerny, G. (1978). Studies on aminopeptidase for the distinction of Gram-negative from Gram-positive bacteria. Eur J Appl Microbiol Biotechnol 5, 113-122. (Pubitemid 8370238)
3. Chun, J., Lee, J.-H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
4. Cowan, S. T. & Steel, K. J. (1965). Manual for the Identification of Medical Bacteria. London: Cambridge University Press.
5. Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
6. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
7. Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
8. Hamada, M., Tamura, T., Ishida, Y. & Suzuki, K. (2009). Georgenia thermotolerans sp. nov., an actinobacterium isolated from forest soil. Int J Syst Evol Microbiol 59, 1875-1879.
9. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
10. Kroppenstedt, R. M. (1982). Separation of bacterial menaquinones by HPLC using reverse phase (RP18) and a silver loaded ion exchanger as stationary phases. J Liq Chromatogr 5, 2359-2367.
11. Leifson, E. (1960). Atlas of Bacterial Flagellation. London: Academic Press.
12. Li, W.-J., Xu, P., Schumann, P., Zhang, Y.-Q., Pukall, R., Xu, L.-H., Stackebrandt, E. & Jiang, C.-L. (2007). Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China), and emended description of the genus Georgenia. Int J Syst Evol Microbiol 57, 1424-1428.
13. Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
14. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
15. Minnikin, D. E., O'Donnell, A. G., Goodfellow, M., Alderson, G., Athalye, M., Schaal, A. & Parlett, J. H. (1984). An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2, 233-241. (Pubitemid 14058168)
16. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
17. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. USFCC Newsl 20, 16.
18. Schleifer, K. H. (1985). Analysis of the chemical composition and primary structure of murein. Methods Microbiol 18, 123-156.
19. Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
20. Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
21. Tang, S.-K., Wang, Y., Lou, K., Mao, P.-H., Xu, L.-H., Jiang, C.-L., Kim, C.-J. & Li, W.-J. (2009a). Kocuria halotolerans sp. nov., an actinobacterium isolated from a saline soil in China. Int J Syst Evol Microbiol 59, 1316-1320.
22. Tang, S.-K., Wang, Y., Chen, Y., Lou, K., Cao, L.-L., Xu, L.-H. & Li, W.-J. (2009b). Zhihengliuella alba sp. nov., and emended description of the genus Zhihengliuella. Int J Syst Evol Microbiol 59, 2025-2032.