Electrochemical nucleic acid-based biosensors: Concepts, terms, and methodology (IUPAC Technical Report)

Pure and Applied Chemistry

Volumn 82, Issue 5, 2010, Pages 1161-1187

  Labuda, Jan ^a   Oliveira Brett, Ana Maria ^b   Evtugyn, Gennady ^c   Fojta, Miroslav ^d   Mascini, Marco ^e   Ozsoz, Mehmet ^f   Palchetti, Ilaria ^e   Paleček, Emil ^d   Wang, Joseph ^g  

^a SLOVAK UNIVERSITY OF TECHNOLOGY   (Slovakia)

^b UNIVERSITY OF COIMBRA   (Portugal)

^c KAZAN FEDERAL UNIVERSITY   (Russian Federation)

^d INSTITUTE OF BIOPHYSICS   (Czech Republic)

^e UNIVERSITY OF FLORENCE   (Italy)

^f EGE UNIVERSITY   (Turkey)

^g UNIVERSITY OF SAN DIEGO   (United States)

Author keywords

Aptamers; Biosensors; DNA damage; Electrochemistry; IUPAC analytical chemistry division; Nucleic acid hybridization; Nucleic acid interactions; Nucleic acids

Indexed keywords

EID: 77953267076     PISSN: 00334545     EISSN: 13653075     Source Type: Journal    
DOI: 10.1351/PAC-REP-09-08-16     Document Type: Article

References (59)

1. D. R. Thevenot, K. Toth, R. A. Durst, G. S. Wilson. Pure Appl. Chem. 71, 2333 (1999).
2. IUPAC. Compendium of Chemical Terminology, 2nd ed. (the "Gold Book"). Compiled by A. D. McNaught and A. Wilkinson. Blackwell Scientific Publications, Oxford (1997). XML on-line corrected version: http://goldbook. iupac.org (2006-) created by M. Nic, J. Jirat, B. Kosata; updates compiled by A. Jenkins.
3. E. Paleček, F. Jelen. In Electrochemistry of Nucleic Acids and Proteins. Towards Electrochemical Sensors for Genomics and Proteomics, E. Paleček, F. Scheller, J. Wang, (Eds.), pp. 74-174, Elsevier, Amsterdam (2005).
4. E. Katz, I. Willner. In Technology and Performance, V. Mirsky (Ed.), pp. 67-106, Springler-Verlag, Berlin (2004).
5. E. Paleček, M. Fojta. Talanta 74, 276 (2007).
6. J. Wang, E. Paleček, P. Nielsen, G. Rivas, X. Cai, H. Shiraishi, H. Dontha, D. Luo, P. A. M. Farias. J. Am. Chem. Soc. 118, 7667 (1996).
7. E. Paleček. In Methods in Enzymology, J. N. Abelson, M. I. Simon (Eds.), pp. 139-155, Academic Press, New York (1992).
8. T. Hermann, D. J. Patel. Science 287, 820 (2000).
9. S. Klussman (Ed.). The Aptamer Handbook, Wiley-VCH, Weinheim (2006).
10. S. Tombelli, M. Minunni, M. Mascini. Biomol. Eng. 24, 191 (2007).
11. A. D. Ellington, J. W. Szostak. Nature 346, 818 (1990).
12. C. Tuerk, L. Gold. Science 249, 505 (1990).
13. R. Fadrna, K. Kucharikova-Cahova, L. Havran, B. Yosypchuk, M. Fojta. Electroanalysis 17, 452 (2005).
14. B. Yosypchuk, M. Fojta, L. Havran, M. Heyrovsky, E. Paleček. Electroanalysis 18, 186 (2006).
15. E. E. Ferapontova, E. Dominguez. Electroanalysis 15, 629 (2003).
16. M. Fojta. In Electrochemistry of Nucleic Acids and Proteins. Towards Electrochemical Sensors for Genomics and Proteomics, E. Paleček, F. Scheller, J. Wang (Eds.), pp. 386-431, Elsevier, Amsterdam (2005).
17. J. Labuda, M. Fojta, F. Jelen, E. Paleček. In Encyclopedia of Sensors, C. A. Grimes, E. C. Dickey, M. V. Pishko (Eds.), pp. 201-228, American Scientific Publishers, Stevenson Ranch, CA (2006).
18. N. Popovich, H. Thorp. Interface 11, 30 (2002).
19. J. Galandova, G. Ziyatdinova, J. Labuda. Anal. Sci. 24, 711 (2008).
20. M. Steichen, Y. Decrem, E. Godfroid, C. Buess-Herman. Biosens. Bioelectron. 22, 2237 (2007).
21. E. Paleček, M. Fojta. In Bioelectronics, I. Wilner, E. Katz (Eds.), pp. 127-192, Wiley-VCH, Weinheim (2005).
22. P. Kara, K. Kerman, D. Ozkan, B. Meric, A. Erdem, Z. Ozkan, M. Ozsoz. Electrochem. Commun. 4, 705 (2002).
23. M. Hocek, M. Fojta. Org. Biomol. Chem. 6, 2233 (2008).
24. M. Fojta, P. Kostecka, M. Trefulka, L. Havran, E. Paleček. Anal. Chem. 79, 1022 (2007).
25. G. U. Flechsig, T. Reske. Anal. Chem. 79, 2125 (2007).
26. M. Trefulka, V. Ostatna, L. Havran, M. Fojta, E. Paleček. Electroanalysis 19, 1281 (2007).
27. E. Katz, B. Willner, I. Willner. In Electrochemistry of Nucleic Acids and Proteins. Towards Electrochemical Sensors for Genomics and Proteomics, E. Paleček, F. Scheller, J. Wang (Eds.), pp. 195-246, Elsevier, Amsterdam (2005).
28. J. Wang. In Electrochemistry of Nucleic Acids and Proteins. Towards Electrochemical Sensors for Genomics and Proteomics, E. Paleček, F. Scheller, J. Wang (Eds.), pp. 369-384, Elsevier, Amsterdam (2005).
29. C. Fan, K. W. Plaxco, A. J. Heeger. Proc. Natl. Acad. Sci. USA 100, 9134 (2003).
30. I. Willner, E. Katz, B. Willner. Electroanalytical Methods for Biological Materials, A. Brajter-Toth, J. Q. Chambers (Eds.), pp. 43-107, Marcel Dekker, New York (2002).
31. A. A. Gorodetsky, M. C. Buzzeo, J. K. Barton. Bioconjugate Chem. 19, 2285 (2008).
32. D. W. Pang, H. D. Abruna. Anal. Chem. 70, 3162 (1998).
33. M. Gebala, L. Stoica, S. Neugebauer, W. Schuhmann. Electroanalysis 21, 325 (2009).
34. E. Paleček, V. Ostatna. Electroanalysis 19, 2383 (2007).
35. A. M. O. Brett, V. C. Diculescu, A. M. Chiorcea-Paquim, S. H. P. Serrano. In Electrochemical Sensors Analysis, S. Alegret, A. Merkoci (Eds.), pp. 413-438, Elsevier, Amsterdam (2007).
36. J. F. Rusling. In Electrochemistry of Nucleic Acids and Proteins. Towards Electrochemical Sensors for Genomics and Proteomics, E. Paleček, F. Scheller, J. Wang (Eds.), pp. 433-449, Elsevier, Amsterdam (2005).
37. G. Zauner, Y. Wang, M. Lavesa-Curto, A. MacDonald, A. G. Mayes, R. P. Bowater, J. N. Butt. Analyst 130, 345 (2005).
38. M. B. Gonzalez-Garcia, M. T. Fernandez-Abedul, A. Costa-Garcia. In Electrochemical Sensors Analysis, S. Alegret, A. Merkoci (Eds.), pp. 603-641, Elsevier, Amsterdam (2007).
39. M. J. Tarlov, A. B. Steel. In Biomolecular Films. Design, Function, and Applications, J. F. Rusling (Ed.), pp. 545-608, Marcel Dekker, New York (2003).
40. A. Sassolas, B. D. Leca-Bouvier, L. J. Blum. Chem. Rev. 108, 109 (2008).
41. R. Hintsche, B. Elsholz, G. Piechotta, R. Woerl, C. G. J. Schabmueller, J. Albers, V. Dharuman, E. Nebling, A. Hanisch, L. Blohm, F. Hofmann, B. Holzapfl, A. Frey, C. Paulus, M. Schienle, R. Thewes. In Electrochemistry of Nucleic Acids and Proteins. Towards Electrochemical Sensors for Genomics and Proteomics, E. Paleček, F. Scheller, J. Wang (Eds.), pp. 247-275, Elsevier, Amsterdam (2005).
42. A. M. O. Brett. In Electrochemistry at the Nanoscale, P. Schmuki, S. Virtanen (Eds.), pp. 407-433, Springer, New York (2009).
43. A. Ferancova, J. Labuda. In Nanostructured Materials in Electrochemistry, A. Eftekhari, (Ed.), pp. 409-434, Wiley-VCH, Weinheim (2008).
44. K. Kalantar-zadeh, B. Fry. Nanotechnology: Enabled Sensors, Springer, New York (2008).
45. K. Balasubramanian, M. Burghard. Anal. Bioanal. Chem. 385, 452 (2006).
46. J. Wang, X. H. Cai, B. M. Tian, H. Shiraishi. Analyst 121, 965 (1996).
47. C. G. Hu, S. S. Hu. Electrochim. Acta 49, 405 (2004).
48. M. L. Pedano, G. A. Rivas. Biosens. Bioelectron. 18, 269 (2003).
49. A. M. O. Brett, A. M. Chiorcea. Electrochem. Commun. 5, 178 (2003).
50. J. Galandova, J. Labuda. Chem. Pap. 63, 1 (2009).
51. P. Mailley, A. Roget, T. Livache. In Electrochemistry of Nucleic Acids and Proteins. Towards Electrochemical Sensors for Genomics and Proteomics, E. Paleček, F. Scheller, J. Wang (Eds.), pp. 297-329, Elsevier, Amsterdam (2005).
52. S. Q. Liu, J. J. Xu, H. Y. Chen. Bioelectrochemistry 57, 149 (2002).
53. H. Chen, C. K. Heng, P. D. Puiu, X. D. Zhou, A. C. Lee, T. M. Lim, S. N. Tan. Anal. Chim. Acta 554, 52 (2005).
54. J. J. Gooding, F. Mearns, W. R. Yang, J. Q. Liu. Electroanalysis 15, 81 (2003).
55. J. Watterson, P. A. E. Piunno, U. J. Krull. Anal. Chim. Acta 469, 115 (2002).
56. B. J. Taft, M. O'Keefe, J. T. Fourkas, S. O. Kelley. Anal. Chim. Acta 496, 81 (2003).
57. F. Y. Ma, R. B. Lennox. Langmuir 16, 6188 (2000).
58. K. M. Millan, A. J. Spurmanis, S. R. Mikkelsen. Electroanalysis 4, 929 (1992).
59. D. I. Rozkiewicz, J. Gierlich, G. A. Burley, K. Gutsmiedl, T. Carell, B. J. Ravoo, D. N. Reinhoudt. Chembiochem 8, 1997 (2007).