Estimating sparse gene regulatory networks using a bayesian linear regression

IEEE Transactions on Nanobioscience

Volumn 9, Issue 2, 2010, Pages 121-131

  Sarder, Pinaki ^a   Schierding, William ^b   Cobb, J Perren ^c   Nehorai, Arye ^a  

^a WASHINGTON UNIVERSITY IN ST LOUIS   (United States)

^b WASHINGTON UNIVERSITY   (United States)

^c WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

BANJO; Bayesian analysis of time series (BATS); Bayesian linear regression; Correlation coefficient; DREAME; Extraction of differential gene expression software (EDGE); Gene regulatory network (GRN); Ingenuity pathway analysis (IPA); Mutual information; Network identification by multiple regression (NIR) time series network identification (TSNI) ; Sparsity; Ventilatorassociated pneumonia (VAP)

Indexed keywords

BANJO; BAYESIAN; BAYESIAN ANALYSIS; BAYESIAN ANALYSIS OF TIME SERIES (BATS); CORRELATION COEFFICIENT; DIFFERENTIAL GENE EXPRESSIONS; DREAME; GENE REGULATORY NETWORKS; MULTIPLE REGRESSIONS; MUTUAL INFORMATIONS; PATHWAY ANALYSIS; SPARSITY; VENTILATOR-ASSOCIATED PNEUMONIA;

BAYESIAN NETWORKS; COMPUTER SOFTWARE; DATA REDUCTION; ESTIMATION; GENE EXPRESSION; INFRARED DEVICES; LAWS AND LEGISLATION; LINEAR REGRESSION; MAMMALS; PULMONARY DISEASES; STRUCTURES (BUILT OBJECTS); TIME SERIES; TIME SERIES ANALYSIS;

GENE EXPRESSION REGULATION;

ARTICLE; BAYES THEOREM; BIOLOGY; COMPUTER PROGRAM; COMPUTER SIMULATION; DNA MICROARRAY; GENE EXPRESSION PROFILING; GENE REGULATORY NETWORK; GENETICS; HUMAN; LEUKOCYTE; METABOLISM; METHODOLOGY; STATISTICAL MODEL; VENTILATOR ASSOCIATED PNEUMONIA;

BAYES THEOREM; COMPUTATIONAL BIOLOGY; COMPUTER SIMULATION; GENE EXPRESSION PROFILING; GENE REGULATORY NETWORKS; HUMANS; LEUKOCYTES; LINEAR MODELS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PNEUMONIA, VENTILATOR-ASSOCIATED; SOFTWARE;

EID: 77953252821     PISSN: 15361241     EISSN: None     Source Type: Journal    
DOI: 10.1109/TNB.2010.2043444     Document Type: Article

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