Sequence analysis of a bacteriocinogenic plasmid of Clostridium butyricum and expression of the bacteriocin gene in Escherichia coli

Anaerobe

Volumn 16, Issue 3, 2010, Pages 253-257

  Nakanishi, Shusuke ^a   Tanaka, Mamoru ^a  

^a Miyarisan Pharmaceutical Co   (Japan)

Author keywords

Bacteriocin; Clostridium butyricum; Plasmid; Sequence

Indexed keywords

BACTERIAL PROTEIN; BACTERIOCIN; BUTYRICIN; CYTOSINE; GUANINE; RECOMBINANT PROTEIN; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL GENE; BACTERICIDAL ACTIVITY; BACTERIUM CULTURE; CARBOXY TERMINAL SEQUENCE; CLOSTRIDIUM BUTYRICUM; CONTROLLED STUDY; ESCHERICHIA COLI; EXPRESSION VECTOR; GENE INSERTION; GENETIC CODE; MOLECULAR SIZE; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PLASMID; PREDICTION; PRIORITY JOURNAL; PROTEIN CLEAVAGE; PROTEIN EXPRESSION; PROTEIN PURIFICATION; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; STRUCTURAL GENE; BIOSYNTHESIS; GENETICS; MOLECULAR GENETICS; PROTEIN ENGINEERING;

AMINO ACID SEQUENCE; BACTERIOCINS; CLOSTRIDIUM BUTYRICUM; ESCHERICHIA COLI; GENES, BACTERIAL; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; PLASMIDS; PROTEIN ENGINEERING; RECOMBINANT PROTEINS; SEQUENCE ANALYSIS; SEQUENCE ANALYSIS, PROTEIN;

BACTERIA (MICROORGANISMS); CLOSTRIDIUM BUTYRICUM; CLOSTRIDIUM TYROBUTYRICUM; ESCHERICHIA COLI;

EID: 77953230373     PISSN: 10759964     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.anaerobe.2009.10.002     Document Type: Article

References (24)

1. Finegold S.M., Sutter V.L., Mathisen G.E. Normal indigenous intestinal flora. Human intestinal microflora in health and disease 1983, 3-31. Academic Press, New York. D.J. Hentges (Ed.).
2. Minton N.P., Morris J.G. Isolation and partial characterisation of three cryptic plasmids from strains of Clostridium butyricum. J Gen Microbiol 1981, 127:325-331.
3. Popoff M.R., Truffaut N. Survey of plasmids in Clostridium butyricum and Clostridium beijerinckii from different origins and different phenotypes. Curr Microbiol 1985, 12:151-156.
4. Fujita I., Maeda A., Takashi K. Studies on the anti-diarrheal activity of Clostridium butyricum Miyairi 588. Jpn Pharmacol Ther 1986, 14:137-141.
5. Ito I., Hayashi T., Iguchi A., Endo H., Nakao M., Kato S., et al. Effects of administration of Clostridium butyricum to patients receiving long-term tube feeding. Nippon Ronen Igakkai Zasshi 1997, 34:298-304.
6. Seki H., Shiohara M., Matsumura T., Miyagawa N., Tanaka M., Komiyama A., et al. Prevention of antibiotic-associated diarrhea in children by Clostridium butyricum MIYAIRI. Pediatr Int 2003, 45:86-90.
7. Sato R., Tanaka M. Intestinal distribution and intraluminal localization of orally administered Clostridium butyricum in rats. Microbiol Immunol 1997, 41:665-671.
8. Nakanishi S., Kataoka K., Kuwahara T., Ohnishi Y. Effects of high amylose maize starch and Clostridium butyricum on metabolism in colonic microbiota and formation of azoxymethane-induced aberrant crypt foci in the rat colon. Microbiol Immunol 2003, 47:951-958.
9. Scheppach W. Effects of short chain fatty acids on gut morphology and function. Gut 1994, 35(Suppl. 1):S35-S38.
10. Kuroiwa T., Kobari K., Iwanaga M. Inhibition of enteropathogens by Clostridium butyricum MIYAIRI 588. Kansenshogaku Zasshi 1990, 64:257-263.
11. Takahashi M., Taguchi H., Yamaguchi H., Osaki T., Komatsu A., Kamiya S. The effect of probiotic treatment with Clostridium butyricum on enterohemorrhagic Escherichia coli O157:H7 infection in mice. FEMS Immunol Med Microbiol 2004, 41:219-226.
12. Tagg J.R., Dajani A.S., Wannamaker L.W. Bacteriocins of gram-positive bacteria. Bacteriol Rev 1976, 40:722-756.
13. Drider D., Fimland G., Héchard Y., McMullen L.M., Prévost H. The continuing story of class IIa bacteriocins. Microbiol Mol Biol Rev 2006, 70:564-582.
14. Clarke D.J., Robson R.M., Morris J.G. Purification of two Clostridium bacteriocins by procedures appropriate to hydrophobic proteins. Antimicrob Agents Chemother 1975, 7:256-264.
15. Clarke D.J., Morris J.G. Butyricin 7423: a bacteriocin produced by Clostridium butyricum NCIB7423. J Gen Microbiol 1976, 95:67-77.
16. Lukashin A.V., Borodovsky M. GeneMark.hmm: new solutions for gene finding. Nucleic Acids Res 1998, 26:1107-1115.
17. Bateman A., Birney E., Cerruti L., Durbin R., Etwiller L., Eddy S.R., et al. The Pfam protein families database. Nucleic Acids Res 2002, 30:276-280.
18. Nielsen H., Engelbrecht J., Brunak S., von Heijne G. A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Int J Neural Syst 1997, 8:581-599.
19. Kemperman R., Kuipers A., Karsens H., Nauta A., Kuipers O., Kok J. Identification and characterization of two novel clostridial bacteriocins, circularin A and closticin 574. Appl Environ Microbiol 2003, 69:1589-1597.
20. Minton N.P., Brehm J.K., Swinfield T.J., Whelan S.M., Mauchline M.L., Bodsworth N., et al. Clostridial cloning vectors. The clostridia and biotechnology 1993, 119-150. Butterworth-Heinemann, Oxford. D.R. Woods (Ed.).
21. Clarke D.J., Fuller F.M., Morris J.G. The proton-translocating adenosine triphosphatase of the obligately anaerobic bacterium Clostridium pasteurianum. 1. ATP phosphohydrolase activity. Eur J Biochem 1979, 98:597-612.
22. + -ATPase of Clostridium pasteurianum. Arch Microbiol 1982, 131:81-86.
23. Landon M. Cleavage at aspartyl-prolyl bonds. Meth Enzymol 1977, 47:145-149.
24. Jonsson E., Conway P. Probiotics for pigs. Probiotics, the scientific basis 1992, 259-316. Chapman and Hall, London. R. Fuller (Ed.).