메뉴 건너뛰기




Volumn 158, Issue 5, 2010, Pages 351-356

Analysis of the complete nucleotide sequence of the polymerase gene of Barley Yellow Striate Mosaic Virus- Iranian Isolate

Author keywords

Cytorhabdoviruses; Phylogenetic relationships; Polymerase gene; Rhaboviridae

Indexed keywords

BARLEY; GENETIC ANALYSIS; PHYLOGENETICS; POLYMERASE CHAIN REACTION; PROTEIN; VIRUS;

EID: 77953097118     PISSN: 09311785     EISSN: 14390434     Source Type: Journal    
DOI: 10.1111/j.1439-0434.2009.01624.x     Document Type: Article
Times cited : (8)

References (40)
  • 1
    • 0015711637 scopus 로고
    • In vitro synthesis of RNA that contains polyadenylate by virion-associated RNA polymerase of Vesicular stomatitis virus
    • Banerjee AK, Rhodes DP. In vitro synthesis of RNA that contains polyadenylate by virion-associated RNA polymerase of Vesicular stomatitis virus. Proc Natl Acad Sci USA 1973, 70:3566-3570.
    • (1973) Proc Natl Acad Sci USA , vol.70 , pp. 3566-3570
    • Banerjee, A.K.1    Rhodes, D.P.2
  • 3
    • 26244450003 scopus 로고    scopus 로고
    • Phylogenetic relationships among rhabdoviruses inferred using the L polymerase gene
    • Bourhy H, Cowley JA, Larrous F, Holmes EC, Walker PJ. Phylogenetic relationships among rhabdoviruses inferred using the L polymerase gene. J Gen Virol 2005, 86:2849-2858.
    • (2005) J Gen Virol , vol.86 , pp. 2849-2858
    • Bourhy, H.1    Cowley, J.A.2    Larrous, F.3    Holmes, E.C.4    Walker, P.J.5
  • 4
    • 84990001310 scopus 로고
    • Investigation on a bullet-shaped virus of cereals isolated in Italy from planthoppers
    • Conti M. Investigation on a bullet-shaped virus of cereals isolated in Italy from planthoppers. Phytopathol Z 1969, 66:275-279.
    • (1969) Phytopathol Z , vol.66 , pp. 275-279
    • Conti, M.1
  • 7
    • 0033758906 scopus 로고    scopus 로고
    • RNA polymerase (L) gene and genome terminal sequences of ephemeroviruses Bovine ephemeral fever virus and Adelaide River virus a close relationship to vesiculoviruses
    • Dhillon J, Cowley JA, Wang Y, Walker PJ. RNA polymerase (L) gene and genome terminal sequences of ephemeroviruses Bovine ephemeral fever virus and Adelaide River virus a close relationship to vesiculoviruses. Virus Res 2000, 70:87-95.
    • (2000) Virus Res , vol.70 , pp. 87-95
    • Dhillon, J.1    Cowley, J.A.2    Wang, Y.3    Walker, P.J.4
  • 8
    • 33646023372 scopus 로고    scopus 로고
    • Completion of the genome sequence of Lettuce necrotic yellows virus, type species of the genus Cytorhabdovirus
    • Dietzgen RG, Callagan B, Wetzel T, Dale JL. Completion of the genome sequence of Lettuce necrotic yellows virus, type species of the genus Cytorhabdovirus. Virus Res 2006, 118:16-22.
    • (2006) Virus Res , vol.118 , pp. 16-22
    • Dietzgen, R.G.1    Callagan, B.2    Wetzel, T.3    Dale, J.L.4
  • 9
    • 0023988581 scopus 로고
    • Nucleotide sequence of L gene of Vesicular stomatitis virus (New Jersey): identification of conserved domains in the New Jersey and Indiana L proteins
    • Feldhaus AL, Lesnaw JA. Nucleotide sequence of L gene of Vesicular stomatitis virus (New Jersey): identification of conserved domains in the New Jersey and Indiana L proteins. Virology 1988, 163:359-368.
    • (1988) Virology , vol.163 , pp. 359-368
    • Feldhaus, A.L.1    Lesnaw, J.A.2
  • 10
    • 0026704614 scopus 로고
    • A random-PCR method (rPCR) to construct whole cDNA library from low amounts of RNA
    • Froussard P. A random-PCR method (rPCR) to construct whole cDNA library from low amounts of RNA. Nucleic Acids Res 1992, 20:2900.
    • (1992) Nucleic Acids Res , vol.20 , pp. 2900
    • Froussard, P.1
  • 11
    • 38349119420 scopus 로고    scopus 로고
    • Complete nucleotide sequence of a putative new cytorhabdovirus infecting lettuce
    • Heim F, Lot H, Delecolle B, Bassler A, Krezal G, Wetzel T. Complete nucleotide sequence of a putative new cytorhabdovirus infecting lettuce. Arch Virol 2008, 153:81-92.
    • (2008) Arch Virol , vol.153 , pp. 81-92
    • Heim, F.1    Lot, H.2    Delecolle, B.3    Bassler, A.4    Krezal, G.5    Wetzel, T.6
  • 12
    • 0023968641 scopus 로고
    • The Vesicular stomatitis virus L-protein possesses the messenger-RNA methyl-transferase activities
    • Hercyk N, Horikami SM, Moyer SA. The Vesicular stomatitis virus L-protein possesses the messenger-RNA methyl-transferase activities. Virology 1988, 16:222-225.
    • (1988) Virology , vol.16 , pp. 222-225
    • Hercyk, N.1    Horikami, S.M.2    Moyer, S.A.3
  • 14
    • 0021741110 scopus 로고
    • Aberrant polyadenylation by a Vesicular stomatitis virus mutant is due to an altered L protein
    • Hunt DM, Smith EF, Buckley DW. Aberrant polyadenylation by a Vesicular stomatitis virus mutant is due to an altered L protein. J Virol 1984, 52:515-521.
    • (1984) J Virol , vol.52 , pp. 515-521
    • Hunt, D.M.1    Smith, E.F.2    Buckley, D.W.3
  • 15
    • 77953103790 scopus 로고
    • Barley yellow striate mosaic virus as the cause of a major disease of wheat and millet in Iran
    • Izadpanah K, Ebrahim-Nesbat F, Afsharifar AR. Barley yellow striate mosaic virus as the cause of a major disease of wheat and millet in Iran. J Phytopathol 1991, 131:290-296.
    • (1991) J Phytopathol , vol.131 , pp. 290-296
    • Izadpanah, K.1    Ebrahim-Nesbat, F.2    Afsharifar, A.R.3
  • 17
    • 0025815377 scopus 로고
    • Expression of functional Bunyamwera virus L protein by recombinant vaccinia viruses
    • Jin H, Elliot RM. Expression of functional Bunyamwera virus L protein by recombinant vaccinia viruses. J Virol 1991, 65:4182-4189.
    • (1991) J Virol , vol.65 , pp. 4182-4189
    • Jin, H.1    Elliot, R.M.2
  • 18
    • 0026765002 scopus 로고
    • Mutagenesis of the L protein encoded by Bunyamwera virus and production of monospecific antibodies
    • Jin H, Elliot RM. Mutagenesis of the L protein encoded by Bunyamwera virus and production of monospecific antibodies. J Gen Virol 1992, 73:2235-2244.
    • (1992) J Gen Virol , vol.73 , pp. 2235-2244
    • Jin, H.1    Elliot, R.M.2
  • 19
    • 0021770887 scopus 로고
    • Primary structural comparison of RNA-dependent polymerases from plant, animal and bacterial viruses
    • Kamer G, Argos P. Primary structural comparison of RNA-dependent polymerases from plant, animal and bacterial viruses. Nucleic Acid Res 1984, 12:7269-7282.
    • (1984) Nucleic Acid Res , vol.12 , pp. 7269-7282
    • Kamer, G.1    Argos, P.2
  • 20
    • 0025743809 scopus 로고
    • The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses
    • Koonin EV. The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses. J Gen Virol 1991, 72:2197-2206.
    • (1991) J Gen Virol , vol.72 , pp. 2197-2206
    • Koonin, E.V.1
  • 21
    • 0030878540 scopus 로고    scopus 로고
    • The complete Mokola virus genome sequence: structure of the RNA-dependent RNA polymerase gene
    • Le MercierP, Jacob Y, Tordo N. The complete Mokola virus genome sequence: structure of the RNA-dependent RNA polymerase gene. J Gen Virol 1997, 78:1571-1576.
    • (1997) J Gen Virol , vol.78 , pp. 1571-1576
    • Le, M.1    Jacob, Y.2    Tordo, N.3
  • 22
    • 35348924854 scopus 로고    scopus 로고
    • Conserved characteristics of the rhabdovirus nucleoprotein
    • Luo M, Green TJ, Zhang X, Tsao J, Qiu S. Conserved characteristics of the rhabdovirus nucleoprotein. Virus Res 2007, 129:249-251.
    • (2007) Virus Res , vol.129 , pp. 249-251
    • Luo, M.1    Green, T.J.2    Zhang, X.3    Tsao, J.4    Qiu, S.5
  • 23
    • 33748321087 scopus 로고    scopus 로고
    • First record of Barley yellow striate mosaic virus affecting wheat summer nurseries in Syria
    • Makkouk KM, Kumari G, Ghulam W, Attar N. First record of Barley yellow striate mosaic virus affecting wheat summer nurseries in Syria. Plant Dis 2004, 88:83.
    • (2004) Plant Dis , vol.88 , pp. 83
    • Makkouk, K.M.1    Kumari, G.2    Ghulam, W.3    Attar, N.4
  • 24
    • 44449178199 scopus 로고    scopus 로고
    • Analysis of nucleotide sequence of Iranian maize mosaic virus confirms its identity as a distinct nucleorhabdovirus
    • Massah A, Izadpanah K, Afsharifar AR. Analysis of nucleotide sequence of Iranian maize mosaic virus confirms its identity as a distinct nucleorhabdovirus. Arch Virol 2008, 153:1041-1047.
    • (2008) Arch Virol , vol.153 , pp. 1041-1047
    • Massah, A.1    Izadpanah, K.2    Afsharifar, A.R.3
  • 25
    • 0008348267 scopus 로고
    • Barley yellow striate mosaic virus
    • Surrey, Great Britain, Kew, CMI/AAB Descriptions of Plant Viruses No 312
    • Milne G, Conti M. Barley yellow striate mosaic virus. 1986, Surrey, Great Britain, Kew, CMI/AAB Descriptions of Plant Viruses No 312
    • (1986)
    • Milne, G.1    Conti, M.2
  • 26
    • 0022569678 scopus 로고
    • Serological relationships between the nucleocapsids of some planthopper-borne rhabdoviruses of cereals
    • Milne RG, Masenga V, Conti M. serological relationships between the nucleocapsids of some planthopper-borne rhabdoviruses of cereals. Intervirology 1986, 25:83-87.
    • (1986) Intervirology , vol.25 , pp. 83-87
    • Milne, R.G.1    Masenga, V.2    Conti, M.3
  • 27
    • 0003478838 scopus 로고    scopus 로고
    • GeneDoc: a tool for editing and annotating multiple sequencealignments
    • Nicholas KB, Nicholas HB. GeneDoc: a tool for editing and annotating multiple sequencealignments. 1997, http://WWW.psc.edu/biomed/genedoc, ()
    • (1997)
    • Nicholas, K.B.1    Nicholas, H.B.2
  • 28
    • 0021795589 scopus 로고
    • The role of polypeptides L and NS in the transcription process of Vesicular stomatitis virus New Jersey using the template-sensitive mutant tsE1
    • Ongardi J, Cunningham C, Szilagyi JF. The role of polypeptides L and NS in the transcription process of Vesicular stomatitis virus New Jersey using the template-sensitive mutant tsE1. J Gen Virol 1985, 66:1011-1023.
    • (1985) J Gen Virol , vol.66 , pp. 1011-1023
    • Ongardi, J.1    Cunningham, C.2    Szilagyi, J.F.3
  • 29
    • 0030203863 scopus 로고    scopus 로고
    • TREE VIEW: an application to display phylogenetic trees on personal computers
    • Page RDM. TREE VIEW: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 1996, 12:357-358.
    • (1996) Comput Appl Biosci , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 30
    • 0024784519 scopus 로고
    • Identification of four conserved motifs among the RNA-dependent polymerases encoding elements
    • Poch O, Sauvagent I, Delarue M, Tordo N. Identification of four conserved motifs among the RNA-dependent polymerases encoding elements. EMBO J 1989, 8:3867-3874.
    • (1989) EMBO J , vol.8 , pp. 3867-3874
    • Poch, O.1    Sauvagent, I.2    Delarue, M.3    Tordo, N.4
  • 31
    • 0025322445 scopus 로고
    • Sequence comparison of five polymerases (L proteins) of unsegmented negative-strand RNA viruses: theoretical assignment of functional domains
    • Poch O, Blumberg BM, Bougueleret L, Tordo N. Sequence comparison of five polymerases (L proteins) of unsegmented negative-strand RNA viruses: theoretical assignment of functional domains. J Gen Virol 1990, 71:1153-1162.
    • (1990) J Gen Virol , vol.71 , pp. 1153-1162
    • Poch, O.1    Blumberg, B.M.2    Bougueleret, L.3    Tordo, N.4
  • 32
    • 13644264346 scopus 로고    scopus 로고
    • Taro vein chlorosis virus: characterization and variability of a new nucleorhabdovirus
    • Revill P, Trinh X, Dale J, Harding R. Taro vein chlorosis virus: characterization and variability of a new nucleorhabdovirus. J Gen Virol 2005, 86:491-499.
    • (2005) J Gen Virol , vol.86 , pp. 491-499
    • Revill, P.1    Trinh, X.2    Dale, J.3    Harding, R.4
  • 33
    • 0023375195 scopus 로고
    • The neighbor joining method a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M. The neighbor joining method a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987, 35:406-425.
    • (1987) Mol Biol Evol , vol.35 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 34
    • 0021793892 scopus 로고
    • In vitro phosphorylation of the NS protein by the L protein of vesicular stomatitis virus
    • Sanches A, De BP, Banerjee AK. In vitro phosphorylation of the NS protein by the L protein of vesicular stomatitis virus. J Gen Virol 1985, 66:1025-1036.
    • (1985) J Gen Virol , vol.66 , pp. 1025-1036
    • Sanches, A.1    De, B.P.2    Banerjee, A.K.3
  • 35
    • 0027408216 scopus 로고
    • Transcription activity and mutation analysis of recombinant Vesicular stomatitis virus RNA polymerase
    • Sleat DE, Banerjee AK. Transcription activity and mutation analysis of recombinant Vesicular stomatitis virus RNA polymerase. J Virol 1993, 67:1334-1339.
    • (1993) J Virol , vol.67 , pp. 1334-1339
    • Sleat, D.E.1    Banerjee, A.K.2
  • 36
    • 0025886105 scopus 로고
    • Sequence analysis of the polymerase L gene of Human respiratory syncytial virus and predicted phylogeny of non-segmented negative-strand viruses
    • Stec DS, Hill MG, Collins PL. Sequence analysis of the polymerase L gene of Human respiratory syncytial virus and predicted phylogeny of non-segmented negative-strand viruses. Virology 1991, 183:273-287.
    • (1991) Virology , vol.183 , pp. 273-287
    • Stec, D.S.1    Hill, M.G.2    Collins, P.L.3
  • 37
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acid Res 1994, 22:4673-4680.
    • (1994) Nucleic Acid Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 39
    • 0024061706 scopus 로고
    • Completion of the Rabies virus genome sequence determination: highly conserved domains among the L (polymerase) proteins of unsegmented negative-strand RNA viruses
    • Tordo N, Poch O, Ermine A, Keith G, Rougeon F. Completion of the Rabies virus genome sequence determination: highly conserved domains among the L (polymerase) proteins of unsegmented negative-strand RNA viruses. Virology 1988, 165:565-576.
    • (1988) Virology , vol.165 , pp. 565-576
    • Tordo, N.1    Poch, O.2    Ermine, A.3    Keith, G.4    Rougeon, F.5
  • 40
    • 77953111780 scopus 로고
    • Northern cereal mosaic virus
    • New York, USA, CMI/AAE Description of Plant Viruses No 332
    • Toriyama S. Northern cereal mosaic virus. 1986, New York, USA, CMI/AAE Description of Plant Viruses No 332
    • (1986)
    • Toriyama, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.