Understanding oxotransferase reactivity in a model system using singular value decomposition analysis

ACS Symposium Series

Volumn 1012, Issue , 2009, Pages 199-217

  Kail, Brian W ^a   Young, Charles G ^b   Johnson, Mitchell E ^a   Basu, Partha ^a  

^a DUQUESNE UNIVERSITY   (United States)

^b UNIVERSITY OF MELBOURNE   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMISTRY; REACTION INTERMEDIATES; SOLVENTS;

BIOINORGANIC; INDEPENDENT MEASUREMENT; INTERMEDIATE COMPLEX; MODEL SYSTEM; OXYGEN ATOM TRANSFER; SINGULAR VALUE DECOMPOSITION ANALYSIS;

SINGULAR VALUE DECOMPOSITION;

EID: 77953041284     PISSN: 00976156     EISSN: 19475918     Source Type: Book Series    
DOI: 10.1021/bk-2009-1012.ch013     Document Type: Conference Paper

References (34)

1. Nemykin, V. N.; Basu, P. Inorg. Chem. 2005, 44, 7494-7502.
2. Smith, P. D.; Millar, A. J.; Young, C. G.; Ghosh, A.; Basu, P. J. Am. Chem. Soc. 2000, 122, 9298-9299.
3. Nemykin, V. N.; Davie, S. R.; Mondal, S.; Rubie, N.; Kirk, M. L.; Somogyi, A.; Basu, P. J. Am. Chem. Soc. 2002, 124, 756-757.
4. Nemykin, V. N.; Laskin, J.; Basu, P. J. Am. Chem. Soc. 2004, 126, 8604-8605.
5. Nemykin, V. N.; Basu, P. Dalton Trans. 2004, 1928-1933.
6. Millar, A. J.; Doonan, C. J.; Smith, P. D.; Nemykin, V. N.; Basu, P.; Young, C. G. Chem. Eur. J. 2005, 11, 3255-3267.
7. Kail, B. W.; Pirez, L. M.; Zarić, S. D.; Millar, A.; Young, C. G.; Hall, M. B.; Basu, P. Chem. Eur. J. 2006, 12, 7501-7509.
8. Taube, H. In Mechanistic Aspects of Inorganic Reactions; Rorabacher, D. B., Endicott, J. F., Eds.; ACS Symposium Series No. 198; ACS: Washington, D.C., 1982; pp. 151-179.
9. Sharpless, K. B. Tetrahedron 1994, 50, 4235-4258.
10. Holm, R. H. Chem. Rev. 1987, 87, 1401-1449.
11. McMaster, J.; Tunney, J. M.; Garner, C. D. Prog. Inorg. Chem. 2003, 52, 539-583.
12. Enemark, J. H.; Cooney, J. J. A.; Wang, J.-J.; Holm, R. H. Chem. Rev. 2004, 104, 1175-1200.
13. Woo, L. K. Chem. Rev. 1993, 93, 1125-1136.
14. Espenson, J. H. Coord. Chem. Rev. 2005, 249, 329-341.
15. Bakac, A. Coord. Chem. Rev. 2006, 250, 2046-2058.
16. Abu-Omar, M. M. Chem. Commun. 2003, 2102-2111.
17. Hendler, R. W.; Bose, S. K.; Shrager, R. I. Biophys. J. 1993, 65, 1307-1317.
18. Bracher, A.; Schramek, S.; Bacher, A. Biochemistry 2001, 40, 7896-7902.
19. Vandegriff, K. D.; Shrager, R. I. Methods Enzymol. 1994, 232, 460-485.
20. Henry E. R.; Hofrichter, J. Methods Enzymol. 1992, 210, 129-192.
21. Szundi, I.; Cappuccio, J. A.; Borovok, N.; Kotlyar, A. B.; Einarsdóttir, O. Biochemistry 2001, 40, 2186-2193.
22. Petraccone, L.; Pagano, B.; Esposito, V.; Randazzo, A.; Piccialli, G.; Barone, G.; Mattia, C. A.; Giancola, C. J. Am. Chem. Soc. 2005, 127, 16215-16223.
23. Crampin, E. J.; Schnell, S.; McSharry, P. E. Prog. Biophys. Mol. Biol. 2004, 86, 77.
24. Sasaki, J.; Yuzawa, T.; Kandori, H.; Maeda, A.; Hamaguchi, H.-O. Biophys. J. 1995, 68, 2073-2080.
25. Kulcsár, A.; Saltiel, J.; Zimányi, L. J. Am. Chem. Soc. 2001, 123, 3332-3340.
26. Dioumaev, A. K. Biophys. Chem. 1997, 67, 1-26.
27. Egawa, T.; Yoshioka, S.; Takahashi, S.; Hori, H.; Nagano, S.; Shimada, H.; Ishimori, K.; Morishima, I.; Suematsu, M.; Ishimura, Y. J. Biol. Chem. 2003, 278, 41597-41606.
28. Cooper, C. E.; Jurd, M.; Nicholls, P.; Wankasi, M. M.; Svistunenko, D. A.; Reeder, B. J.; Wilson, M. T. Dalton Trans. 2005, 3483-3488.
29. Szundi, I.; Liao, G.-L.; Einarsdóttir, O. Biochemistry 2001, 40, 2332-2339.
30. Xu, Q.; Sachs, J. R.; Wang, T.-C.; Schaefer, W. H. Anal. Chem. 2006, 78, 7175-7185.
31. Kail, B. W. Ph.D. Dissertation, Duquesne University, Pittsburgh, PA 2006.
32. Press, W. H.; Teukolsky, S. A.; Vetterling, W. T.; Flannery, B. P. Numerical Recipes: The Art of Scientific Computing, 3rd Ed.; Cambridge University Press: Cambridge, U.K., 2007.
33. Shrager, R. I.; Hendler, R. W. Anal. Chem. 1982, 54, 1147-1152.
34. Szundi, I.; Ray, J.; Pawate, A.; Gennis, R. B.; Einarsdóttir, O. Biochemistry 2007, 46, 12568-12578.