메뉴 건너뛰기




Volumn 287, Issue 1, 2010, Pages 85-97

A phylogenetic investigation of Carthamus combining sequence and microsatellite data

Author keywords

Carthamus; Microsatellite; Phylogeny; Safflower

Indexed keywords

ASTERACEAE; CARTHAMUS; CARTHAMUS TINCTORIUS;

EID: 77952901855     PISSN: 03782697     EISSN: 16156110     Source Type: Journal    
DOI: 10.1007/s00606-010-0292-3     Document Type: Article
Times cited : (27)

References (54)
  • 1
    • 0035674690 scopus 로고    scopus 로고
    • Use of microsatellites to evaluate genetic diversity and species relationships in the genus Lycopersicon
    • Alvarez AE, van de Wiel CCM, Smulders MJM, Vosman B (2001) Use of microsatellites to evaluate genetic diversity and species relationships in the genus Lycopersicon. Theor Appl Genet 103: 1283-1292.
    • (2001) Theor Appl Genet , vol.103 , pp. 1283-1292
    • Alvarez, A.E.1    van de Wiel, C.C.M.2    Smulders, M.J.M.3    Vosman, B.4
  • 2
    • 3142714944 scopus 로고
    • Inheritance studies with fertile interspecific hybrids of three Carthamus L. species
    • Ashri A, Efron Y (1964) Inheritance studies with fertile interspecific hybrids of three Carthamus L. species. Crop Sci 4: 510-514.
    • (1964) Crop Sci , vol.4 , pp. 510-514
    • Ashri, A.1    Efron, Y.2
  • 3
    • 0003006544 scopus 로고
    • Cytogenetics of safflower (Carthamus L.) species and their hybrids
    • Ashri A, Knowles PF (1960) Cytogenetics of safflower (Carthamus L.) species and their hybrids. Agron J 52: 11-17.
    • (1960) Agron J , vol.52 , pp. 11-17
    • Ashri, A.1    Knowles, P.F.2
  • 4
    • 7044240754 scopus 로고
    • Unequal reciprocal natural hybridization rates between two Carthamus L. species
    • Ashri A, Rudich J (1965) Unequal reciprocal natural hybridization rates between two Carthamus L. species. Crop Sci 5: 190-191.
    • (1965) Crop Sci , vol.5 , pp. 190-191
    • Ashri, A.1    Rudich, J.2
  • 5
    • 34250295842 scopus 로고
    • Identification and polymorphism of cultivars and wild ecotypes of safflower based on isoenzyme patterns
    • Bassiri A (1977) Identification and polymorphism of cultivars and wild ecotypes of safflower based on isoenzyme patterns. Euphytica 26: 709-719.
    • (1977) Euphytica , vol.26 , pp. 709-719
    • Bassiri, A.1
  • 6
    • 38849139937 scopus 로고    scopus 로고
    • DNA sequence diversity and the origin of cultivated safflower (Carthamustinctorius L.; Asteraceae)
    • Chapman MA, Burke JM (2007) DNA sequence diversity and the origin of cultivated safflower (Carthamustinctorius L.; Asteraceae). BMC Plant Biol 7: 60.
    • (2007) BMC Plant Biol , vol.7 , pp. 60
    • Chapman, M.A.1    Burke, J.M.2
  • 7
    • 7044252964 scopus 로고
    • Wild safflower (Carthamus oxyacantha Bieb.)-a possible oilseed crop for the desert and arid regions
    • Deshpande RB (1952) Wild safflower (Carthamus oxyacantha Bieb.)-a possible oilseed crop for the desert and arid regions. Indian J Genet Plant Breed 12: 10-14.
    • (1952) Indian J Genet Plant Breed , vol.12 , pp. 10-14
    • Deshpande, R.B.1
  • 8
    • 0000479431 scopus 로고
    • Isolation of plant DNA from fresh tissue
    • Doyle JF, Doyle JL (1990) Isolation of plant DNA from fresh tissue. Focus 12: 13-15.
    • (1990) Focus , vol.12 , pp. 13-15
    • Doyle, J.F.1    Doyle, J.L.2
  • 9
    • 0033373935 scopus 로고    scopus 로고
    • Gene flow and introgression from domesticated plants into their wild relatives
    • Ellstrand NC, Prentice HC, Hancock JF (1999) Gene flow and introgression from domesticated plants into their wild relatives. Annu Rev Ecol Syst 30: 539-563.
    • (1999) Annu Rev Ecol Syst , vol.30 , pp. 539-563
    • Ellstrand, N.C.1    Prentice, H.C.2    Hancock, J.F.3
  • 10
    • 0006915703 scopus 로고
    • Cytogenetic studies of Carthamus divaricatus with 11 pairs of chromosomes and its relationship to other Carthamus species (Compositae)
    • Estilai A, Knowles PF (1976) Cytogenetic studies of Carthamus divaricatus with 11 pairs of chromosomes and its relationship to other Carthamus species (Compositae). Am J Bot 63: 771-782.
    • (1976) Am J Bot , vol.63 , pp. 771-782
    • Estilai, A.1    Knowles, P.F.2
  • 11
    • 84959747425 scopus 로고
    • Towards defining the course of evolution: Minimum change for a specific tree topology
    • Fitch WM (1971) Towards defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20: 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 12
    • 33344468633 scopus 로고    scopus 로고
    • Genome size variation in the Carthamus (Asteraceae, Cardueae): Systematic implications and additive changes during allopolyploidization
    • Garnatje T, Garcia S, Vilatersana R, Vallès J (2006) Genome size variation in the Carthamus (Asteraceae, Cardueae): systematic implications and additive changes during allopolyploidization. Ann Bot 97: 461-467.
    • (2006) Ann Bot , vol.97 , pp. 461-467
    • Garnatje, T.1    Garcia, S.2    Vilatersana, R.3    Vallès, J.4
  • 13
    • 0030983892 scopus 로고    scopus 로고
    • Launching microsatellites: A review of mutation processes and methods of phylogenetic inference
    • Goldstein DB, Pollock DD (1997) Launching microsatellites: a review of mutation processes and methods of phylogenetic inference. J Hered 88: 335-342.
    • (1997) J Hered , vol.88 , pp. 335-342
    • Goldstein, D.B.1    Pollock, D.D.2
  • 15
    • 0032873516 scopus 로고    scopus 로고
    • Universal linker and ligation procedures for construction of genomic DNA libraries
    • Hamilton MB, Pincus EL, Fiore AD, Fleisher RC (1999) Universal linker and ligation procedures for construction of genomic DNA libraries. Biotechniques 27: 500-507.
    • (1999) Biotechniques , vol.27 , pp. 500-507
    • Hamilton, M.B.1    Pincus, E.L.2    Fiore, A.D.3    Fleisher, R.C.4
  • 16
    • 0003100305 scopus 로고
    • Monographische Ubersicht der Gattung Carthamus L. (Compositae)
    • Hanelt P (1963) Monographische Ubersicht der Gattung Carthamus L. (Compositae). Feddes Repert 67: 41-180.
    • (1963) Feddes Repert , vol.67 , pp. 41-180
    • Hanelt, P.1
  • 17
    • 0027055554 scopus 로고
    • Signal, noise and reliability in molecular phylogenetic analyses
    • Hillis DM, Huelsenbeck JP (1992) Signal, noise and reliability in molecular phylogenetic analyses. J Hered 83: 189-195.
    • (1992) J Hered , vol.83 , pp. 189-195
    • Hillis, D.M.1    Huelsenbeck, J.P.2
  • 18
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogeny
    • Huelsenbeck JP, Ronquist F (2001) MrBayes: Bayesian inference of phylogeny. Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 19
    • 3142584991 scopus 로고
    • Inheritance studies in interspecific hybrids between Carthamus flavescens and C. tinctorius
    • Imrie BC, Knowles PF (1970) Inheritance studies in interspecific hybrids between Carthamus flavescens and C. tinctorius. Crop Sci 10: 349-352.
    • (1970) Crop Sci , vol.10 , pp. 349-352
    • Imrie, B.C.1    Knowles, P.F.2
  • 21
    • 77952929838 scopus 로고    scopus 로고
    • Carthamus
    • Barkley TM, Brouillet L, Jeude H, Strother JL, Gandhi K, Kiger RW, Yatskievych K, Sarucchi JL (eds), New York
    • Keil DJ (2006) Carthamus. In: Barkley TM, Brouillet L, Jeude H, Strother JL, Gandhi K, Kiger RW, Yatskievych K, Sarucchi JL (eds) Flora of North America, vol. 19. New York, pp 178-181.
    • (2006) Flora of North America , vol.19 , pp. 178-181
    • Keil, D.J.1
  • 22
    • 0006915357 scopus 로고
    • Cytogenetic studies of Carthamus species (Compositae) with 32 pairs of chromosomes II. Intersectional hybridization
    • Khidir MO, Knowles PF (1970) Cytogenetic studies of Carthamus species (Compositae) with 32 pairs of chromosomes II. Intersectional hybridization. Can J Genet Cytol 12: 90-99.
    • (1970) Can J Genet Cytol , vol.12 , pp. 90-99
    • Khidir, M.O.1    Knowles, P.F.2
  • 23
    • 8144220537 scopus 로고
    • Safflower
    • Simmonds NW (ed), Longman, New York
    • Knowles PF (1976) Safflower. In: Simmonds NW (ed) Evolution of crop plants. Longman, New York, pp 31.
    • (1976) Evolution of crop plants , pp. 31
    • Knowles, P.F.1
  • 24
    • 7044251745 scopus 로고
    • Artificial hybrids of Carthamus nitidus Boiss. and C. tinctorius L. (Compositae)
    • Knowles PF, Schank SC (1964) Artificial hybrids of Carthamus nitidus Boiss. and C. tinctorius L. (Compositae). Crop Sci 4: 596-599.
    • (1964) Crop Sci , vol.4 , pp. 596-599
    • Knowles, P.F.1    Schank, S.C.2
  • 25
    • 0001881321 scopus 로고
    • Acerca de la Clasificación natural del género Carthamus L., s.l
    • López-González G (1989) Acerca de la Clasificación natural del género Carthamus L., s. l. Anal Jardín Bot Madrid 47: 11-34.
    • (1989) Anal Jardín Bot Madrid , vol.47 , pp. 11-34
    • López-González, G.1
  • 28
    • 0030311441 scopus 로고    scopus 로고
    • Testing for phylogenetic conflict among molecular data sets in the tribe Triticeae (Graminae)
    • Mason-Gamer RJ, Kellogg EA (1996) Testing for phylogenetic conflict among molecular data sets in the tribe Triticeae (Graminae). Syst Biol 45: 524-545.
    • (1996) Syst Biol , vol.45 , pp. 524-545
    • Mason-Gamer, R.J.1    Kellogg, E.A.2
  • 29
    • 7044284718 scopus 로고    scopus 로고
    • Theoretical hybridization potential of transgenic safflower (Carthamus tinctorius L.) with weedy relatives in the New World
    • McPherson MA, Good AG, Topinka AKC, Hall LM (2004) Theoretical hybridization potential of transgenic safflower (Carthamus tinctorius L.) with weedy relatives in the New World. Can J Plant Sci 84: 923-934.
    • (2004) Can J Plant Sci , vol.84 , pp. 923-934
    • McPherson, M.A.1    Good, A.G.2    Topinka, A.K.C.3    Hall, L.M.4
  • 31
    • 0030070216 scopus 로고    scopus 로고
    • Constraints on allele size at microsatellite loci: Implications for genetic differentiation
    • Nauta MJ, Weissing FJ (1996) Constraints on allele size at microsatellite loci: implications for genetic differentiation. Genetics 143: 1021-1032.
    • (1996) Genetics , vol.143 , pp. 1021-1032
    • Nauta, M.J.1    Weissing, F.J.2
  • 32
    • 33846462244 scopus 로고    scopus 로고
    • MrModeltest v2. Program distributed by the author
    • Uppsala University
    • Nylander JAA (2004) MrModeltest v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
    • (2004) Evolutionary Biology Centre
    • Nylander, J.A.A.1
  • 33
    • 0033593958 scopus 로고    scopus 로고
    • A phylogeny of Darwin's finches based on microsatellite DNA length variation
    • Petren K, Grant BR, Grant PR (1999) A phylogeny of Darwin's finches based on microsatellite DNA length variation. Proc R Soc Lond Ser B Biol Sci 266: 321-329.
    • (1999) Proc R Soc Lond Ser B Biol Sci , vol.266 , pp. 321-329
    • Petren, K.1    Grant, B.R.2    Grant, P.R.3
  • 34
    • 0034848435 scopus 로고    scopus 로고
    • Can microsatellites be used to infer phylogenies? Evidence from population affinities of the western Canary Island lizard (Gallotia galloti)
    • Richard M, Thorpe RS (2001) Can microsatellites be used to infer phylogenies? Evidence from population affinities of the western Canary Island lizard (Gallotia galloti). Mol Phylogenet Evol 20: 351-360.
    • (2001) Mol Phylogenet Evol , vol.20 , pp. 351-360
    • Richard, M.1    Thorpe, R.S.2
  • 36
    • 0041386108 scopus 로고    scopus 로고
    • MRBAYES 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP (2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 38
    • 51549092128 scopus 로고    scopus 로고
    • Phylogenetic analysis of Carthamus species based on the nucleotide sequence of the nuclear SACPD gene and chloroplast trnL-trnF IGS region
    • Sasanuma T, Sehgal D, Sasakuma T, Raina SN (2008) Phylogenetic analysis of Carthamus species based on the nucleotide sequence of the nuclear SACPD gene and chloroplast trnL-trnF IGS region. Genome 51: 721-727.
    • (2008) Genome , vol.51 , pp. 721-727
    • Sasanuma, T.1    Sehgal, D.2    Sasakuma, T.3    Raina, S.N.4
  • 39
    • 0033953635 scopus 로고    scopus 로고
    • An economic method for the fluorescent labeling of PCR fragments
    • Schuelke M (2000) An economic method for the fluorescent labeling of PCR fragments. Nat Biotechnol 18: 233-234.
    • (2000) Nat Biotechnol , vol.18 , pp. 233-234
    • Schuelke, M.1
  • 40
    • 49249084655 scopus 로고    scopus 로고
    • Chloroplast DNA diversity reveals the contribution of two wild species to the origin and evolution of diploid safflower (Carthamus tinctorius L.)
    • Sehgal D, Rajpal VR, Raina SN (2008) Chloroplast DNA diversity reveals the contribution of two wild species to the origin and evolution of diploid safflower (Carthamus tinctorius L.). Genome 51: 638-643.
    • (2008) Genome , vol.51 , pp. 638-643
    • Sehgal, D.1    Rajpal, V.R.2    Raina, S.N.3
  • 41
    • 71249134448 scopus 로고    scopus 로고
    • Nuclear DNA assay in solving issues related to ancestry of the domesticated diploid safflower (Carthamus tinctorius L.) and the polyploid (Carthamus) taxa, and phylogenetic and genomic relationships in the genus Carthamus L. (Asteraceae)
    • Sehgal D, Raina SN, Devarumath RM, Sasanuma T, Sasakuma T (2009) Nuclear DNA assay in solving issues related to ancestry of the domesticated diploid safflower (Carthamus tinctorius L.) and the polyploid (Carthamus) taxa, and phylogenetic and genomic relationships in the genus Carthamus L. (Asteraceae). Mol Phylogenet Evol 53: 631-644.
    • (2009) Mol Phylogenet Evol , vol.53 , pp. 631-644
    • Sehgal, D.1    Raina, S.N.2    Devarumath, R.M.3    Sasanuma, T.4    Sasakuma, T.5
  • 43
    • 34250767339 scopus 로고    scopus 로고
    • Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: The tortoise and the hare III
    • Shaw J, Lickey EB, Schilling EE, Small RL (2007) Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: the tortoise and the hare III. Am J Bot 94: 275-288.
    • (2007) Am J Bot , vol.94 , pp. 275-288
    • Shaw, J.1    Lickey, E.B.2    Schilling, E.E.3    Small, R.L.4
  • 44
    • 0010264798 scopus 로고    scopus 로고
    • AOCS Press, Champaign
    • Smith JR (1996) Safflower. AOCS Press, Champaign, pp 2-4.
    • (1996) Safflower , pp. 2-4
    • Smith, J.R.1
  • 46
    • 0026261665 scopus 로고
    • Universal primers for amplification of 3 noncoding regions of chloroplast DNA
    • Taberlet P, Gielly L, Pautou G, Bouvet J (1991) Universal primers for amplification of 3 noncoding regions of chloroplast DNA. Plant Mol Biol 17: 1105-1109.
    • (1991) Plant Mol Biol , vol.17 , pp. 1105-1109
    • Taberlet, P.1    Gielly, L.2    Pautou, G.3    Bouvet, J.4
  • 47
    • 0034082181 scopus 로고    scopus 로고
    • Generic delimitation and phylogeny of the Carduncellus-Carthamus complex (Asteraceae) based on ITS sequences
    • Vilatersana R, Susanna A, Garcia-Jacas N, Garnatje T (2000a) Generic delimitation and phylogeny of the Carduncellus-Carthamus complex (Asteraceae) based on ITS sequences. Plant Syst Evol 221: 89-105.
    • (2000) Plant Syst Evol , vol.221 , pp. 89-105
    • Vilatersana, R.1    Susanna, A.2    Garcia-Jacas, N.3    Garnatje, T.4
  • 48
    • 0033672159 scopus 로고    scopus 로고
    • Karyology, generic delineation and dysploidy in the genera Carduncellus, Carthamus and Phonus (Asteraceae)
    • Vilatersana R, Susanna A, Garcia-Jacas N, Garnatje T (2000b) Karyology, generic delineation and dysploidy in the genera Carduncellus, Carthamus and Phonus (Asteraceae). Bot J Linn Soc 134: 425-438.
    • (2000) Bot J Linn Soc , vol.134 , pp. 425-438
    • Vilatersana, R.1    Susanna, A.2    Garcia-Jacas, N.3    Garnatje, T.4
  • 49
    • 15944418585 scopus 로고    scopus 로고
    • Taxonomic problems in Carthamus (Asteraceae): RAPD markers and sectional classification
    • Vilatersana R, Garnatje T, Susanna A, Garcia-Jacas N (2005) Taxonomic problems in Carthamus (Asteraceae): RAPD markers and sectional classification. Bot J Linn Soc 147: 375-383.
    • (2005) Bot J Linn Soc , vol.147 , pp. 375-383
    • Vilatersana, R.1    Garnatje, T.2    Susanna, A.3    Garcia-Jacas, N.4
  • 50
    • 34447257890 scopus 로고    scopus 로고
    • Molecular evidence for hybrid origins of the invasive polyploids Carthamus creticus and C. turkestanicus (Cardueae, Asteraceae)
    • Vilatersana R, Brysting AK, Brochmann C (2007) Molecular evidence for hybrid origins of the invasive polyploids Carthamus creticus and C. turkestanicus (Cardueae, Asteraceae). Mol Phylogenet Evol 44: 610-621.
    • (2007) Mol Phylogenet Evol , vol.44 , pp. 610-621
    • Vilatersana, R.1    Brysting, A.K.2    Brochmann, C.3
  • 53
    • 42949091436 scopus 로고    scopus 로고
    • Phylogeny of Sinojackia (Styracaceae) based on DNA sequence and microsatellite data: Implications for taxonomy and conservation
    • Yao XH, Ye Q, Fritsch PW, Crux BC, Huang H (2008) Phylogeny of Sinojackia (Styracaceae) based on DNA sequence and microsatellite data: implications for taxonomy and conservation. Ann Bot 101: 651-659.
    • (2008) Ann Bot , vol.101 , pp. 651-659
    • Yao, X.H.1    Ye, Q.2    Fritsch, P.W.3    Crux, B.C.4    Huang, H.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.