Herbidospora yilanensis sp. nov. and Herbidospora daliensis sp. nov., from sediment

International Journal of Systematic and Evolutionary Microbiology

Volumn 60, Issue 5, 2010, Pages 1168-1172

  Tseng, M ^a   Yang, S F ^a   Yuan, G F ^a  

^a FOOD INDUSTRY RESEARCH AND DEVELOPMENT INSTITUTE   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

AGAR; ASPARAGINE; CYSTEINE; DIAMINOPIMELIC ACID; DNA; FATTY ACID; GALACTOSE; GLUCOSE; GLYCINE; INORGANIC SALT; MADUROSE; MANNOSE; MENAQUINONE; MYCOLIC ACID; NITRATE; PEPTIDOGLYCAN; PHOSPHOLIPID; STARCH; SUCROSE; SUGAR; UNCLASSIFIED DRUG;

ACTINOMYCES; ANIMAL EXPERIMENT; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; CARBOHYDRATE SYNTHESIS; DNA DNA HYBRIDIZATION; FUNGUS HYPHAE; GENUS; HERBIDOSPORA DALIENSIS; HERBIDOSPORA YILANENSIS; MALT; MYCELIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; OAT; PHENOTYPE; PRIORITY JOURNAL; SEDIMENT; SPORE GERMINATION; SPOROGENESIS; TAIWAN; WHOLE CELL; YEAST;

ACTINOMYCETALES; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; GENES, RRNA; GENOTYPE; GEOLOGIC SEDIMENTS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY; TAIWAN;

HERBIDOSPORA; HERBIDOSPORA CRETACEA;

EID: 77952713829     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.014803-0     Document Type: Article

References (22)

1. Collins, M. D., Pirouz, T., Goodfellow, M. & Minnikin, D. E. (1977). Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100, 221-230.
2. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
3. Felsenstein, J. (1993). PHYLIP (phylogeny inference package), version 3.5c. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
4. Goodfellow, M. (1971). Numerical taxonomy of some nocardio-form bacteria. J Gen Microbiol 69, 33-80.
5. Gordon, R. E., Barnett, D. A., Handerhan, J. E. & Pang, C. H.-N. (1974). Nocardia coeliaca, Nocardia autotrophica, and the nocardin strain. Int J Syst Bacteriol 24, 54-63.
6. Hasegawa, T., Takizawa, M. & Tanida, S. (1983). A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 29, 319-322. (Pubitemid 14176930)
7. Hayakawa, M. & Nonomura, H. (1987). Humic acid-vitamin agar, a new medium for selective isolation of soil actinomycetes. J Ferment Technol 65, 501-509.
8. Kelly, K. L. (1964). Inter-Society Color Council - National Bureau of Standards Color Name Charts Illustrated with Centroid Colors. Washington, DC: US Government Printing Office.
9. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequence. J Mol Evol 16, 111-120.
10. Kimura, M. (1983). The Neutral Theory of Molecular Evolution. Cambridge: Cambridge University Press.
11. Kluge, A. G. & Farris, J. S. (1969). Quantitative phyletics and the evolution of anurans. Syst Zool 18, 1-32.
12. Kudo, T., Itoh, T., Miyadoh, S., Shomura, T. & Seino, A. (1993). Herbidospora gen. nov., a new genus of the family Streptosporangiaceae Goodfellow et al. 1990. Int J Syst Bacteriol 43, 319-328. (Pubitemid 23118475)
13. Kumar, S., Tamura, K., Jakobsen, I. B. & Nei, M. (2001). MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17, 1244-1245. (Pubitemid 33735359)
14. Lechevalier, M. P., De Bièvre, C. & Lechevalier, H. A. (1977). Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochem Syst Ecol 5, 249-260.
15. Minnikin, D. E., Alshamaony, L. & Goodfellow, M. (1975). Differentiation of Mycobacterium, Nocardia, and related taxa by thin layer chromatographic analysis of whole-cell methanolysates. J Gen Microbiol 88, 200-204.
16. Minnikin, D. E., O'Donnell, A. G., Goodfellow, M., Alderson, G., Athalye, M., Schaal, A. & Parlett, J. H. (1984). An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2, 233-241. (Pubitemid 14058168)
17. Nakajima, Y., Kitpreechavanich, V., Suzuki, K. & Kudo, T. (1999). Microbispora coralline sp. nov., a new species of the genus Microbispora isolated from Thai soil. Int J Syst Bacteriol 49, 1761-1767. (Pubitemid 29519108)
18. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
19. Shirling, E. B. & Gottlieb, D. (1966). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313-340.
20. Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128. (Pubitemid 15217312)
21. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882. (Pubitemid 28022245)
22. Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. & other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.