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Volumn 67, Issue 2, 2010, Pages 143-152

Utility of high-performance liquid chromatography analysis of mycolic acids and partial 16S rRNA gene sequencing for routine identification of Mycobacterium spp. in a national reference laboratory

Author keywords

16S rRNA gene sequencing; High performance liquid chromatography; Mycolic acids

Indexed keywords

MYCOLIC ACID; RNA 16S;

EID: 77952703397     PISSN: 07328893     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.diagmicrobio.2010.02.011     Document Type: Article
Times cited : (12)

References (54)
  • 1
    • 9744231340 scopus 로고    scopus 로고
    • Dissection of phylogenetic relationships among 19 rapidly growing Mycobacterium species by 16S rRNA, hsp65, sodA, recA and rpoB gene sequencing
    • Adékambi T., Drancourt M. Dissection of phylogenetic relationships among 19 rapidly growing Mycobacterium species by 16S rRNA, hsp65, sodA, recA and rpoB gene sequencing. Int. J. Syst. Evol. Microbiol. 2004, 54:2095-2105.
    • (2004) Int. J. Syst. Evol. Microbiol. , vol.54 , pp. 2095-2105
    • Adékambi, T.1    Drancourt, M.2
  • 2
    • 31144445851 scopus 로고    scopus 로고
    • RpoB gene sequence-based characterization of emerging non-tuberculous mycobacteria with descriptions of Mycobacterium bolletii sp. nov., Mycobacterium phocaicum sp. nov. and Mycobacterium aubagnense sp. nov
    • Adékambi T., Berger P., Raoult D., Drancourt M. rpoB gene sequence-based characterization of emerging non-tuberculous mycobacteria with descriptions of Mycobacterium bolletii sp. nov., Mycobacterium phocaicum sp. nov. and Mycobacterium aubagnense sp. nov. Int. J. Syst. Evol. Microbiol. 2006, 56:133-143.
    • (2006) Int. J. Syst. Evol. Microbiol. , vol.56 , pp. 133-143
    • Adékambi, T.1    Berger, P.2    Raoult, D.3    Drancourt, M.4
  • 4
    • 0032754133 scopus 로고    scopus 로고
    • Mycobacterium wolinskyi sp. nov. and Mycobacterium goodii sp. nov., two new rapidly growing species related to Mycobacterium smegmatis and associated with human wound infections: a cooperative study from the International Working Group on Mycobacterial Taxonomy
    • Brown B.A., Springer B., Steingrube V.A., Wilson R.W., Pfyffer G.E., Garcia M.J., Menendez M.C., Rodriguez-Salgado B., Jost K.C., Chiu S.H., Onyi G.O., Bottger E.C., Wallace R.J. Mycobacterium wolinskyi sp. nov. and Mycobacterium goodii sp. nov., two new rapidly growing species related to Mycobacterium smegmatis and associated with human wound infections: a cooperative study from the International Working Group on Mycobacterial Taxonomy. Int. J. Syst. Bacteriol. 1999, 49:1493-1511.
    • (1999) Int. J. Syst. Bacteriol. , vol.49 , pp. 1493-1511
    • Brown, B.A.1    Springer, B.2    Steingrube, V.A.3    Wilson, R.W.4    Pfyffer, G.E.5    Garcia, M.J.6    Menendez, M.C.7    Rodriguez-Salgado, B.8    Jost, K.C.9    Chiu, S.H.10    Onyi, G.O.11    Bottger, E.C.12    Wallace, R.J.13
  • 5
    • 0022631997 scopus 로고
    • High-performance liquid chromatography of mycolic acids as a tool in the identification of Corynebacterium, Nocardia, Rhodococcus, and Mycobacterium species
    • Butler W.R., Ahearn D.G., Kilburn J.O. High-performance liquid chromatography of mycolic acids as a tool in the identification of Corynebacterium, Nocardia, Rhodococcus, and Mycobacterium species. J. Clin. Microbiol. 1986, 23:182-185.
    • (1986) J. Clin. Microbiol. , vol.23 , pp. 182-185
    • Butler, W.R.1    Ahearn, D.G.2    Kilburn, J.O.3
  • 7
    • 0034768463 scopus 로고    scopus 로고
    • Mycolic acid analysis by high-performance liquid chromatography for identification of Mycobacterium species
    • Butler W.R., Guthertz L.S. Mycolic acid analysis by high-performance liquid chromatography for identification of Mycobacterium species. Clin. Microbiol. Rev. 2001, 14:704-726.
    • (2001) Clin. Microbiol. Rev. , vol.14 , pp. 704-726
    • Butler, W.R.1    Guthertz, L.S.2
  • 9
    • 45349090646 scopus 로고    scopus 로고
    • Comparison of in-house and commercial 16S rRNA sequencing with high-performance liquid chromatography and genotype AS and CM for identification of nontuberculous mycobacteria
    • Daley P., Petrich A., May K., Luinstra K., Rutherford C., Chedore P., Jamieson F., Smieja M. Comparison of in-house and commercial 16S rRNA sequencing with high-performance liquid chromatography and genotype AS and CM for identification of nontuberculous mycobacteria. Diag. Microbiol. Infect. Dis. 2008, 61:284-293.
    • (2008) Diag. Microbiol. Infect. Dis. , vol.61 , pp. 284-293
    • Daley, P.1    Petrich, A.2    May, K.3    Luinstra, K.4    Rutherford, C.5    Chedore, P.6    Jamieson, F.7    Smieja, M.8
  • 10
    • 0040460179 scopus 로고    scopus 로고
    • List of bacterial names with standing in nomenclature: a folder available on the Internet
    • List of prokaryotic names with standing in nomenclature. last full update November 02, 2007. URL:, Accessed November 02, 2007
    • Euzéby J.P. List of bacterial names with standing in nomenclature: a folder available on the Internet. Int. J. Syst. Bacteriol. 1997, 47:590-592. List of prokaryotic names with standing in nomenclature. last full update November 02, 2007. URL:, Accessed November 02, 2007. http://www.bacterio.net.
    • (1997) Int. J. Syst. Bacteriol. , vol.47 , pp. 590-592
    • Euzéby, J.P.1
  • 11
    • 0026547619 scopus 로고
    • Separation of Mycobacterium bovis BCG from Mycobacterium tuberculosis and Mycobacterium bovis by using high-performance liquid chromatography of mycolic acids
    • Floyd M.M., Silcox V.A., Jones W.D., Butler W.R., Kilburn J.O. Separation of Mycobacterium bovis BCG from Mycobacterium tuberculosis and Mycobacterium bovis by using high-performance liquid chromatography of mycolic acids. J. Clin. Microbiol. 1992, 30:1327-1330.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 1327-1330
    • Floyd, M.M.1    Silcox, V.A.2    Jones, W.D.3    Butler, W.R.4    Kilburn, J.O.5
  • 12
    • 0028084729 scopus 로고
    • Rapid identification of mycolic acid patterns of mycobacteria by high-performance liquid chromatography using pattern recognition software and a Mycobacterium library
    • Glickman S.E., Kilburn J.O., Butler W.R., Ramos L.S. Rapid identification of mycolic acid patterns of mycobacteria by high-performance liquid chromatography using pattern recognition software and a Mycobacterium library. J. Clin. Microbiol. 1994, 32:740-745.
    • (1994) J. Clin. Microbiol. , vol.32 , pp. 740-745
    • Glickman, S.E.1    Kilburn, J.O.2    Butler, W.R.3    Ramos, L.S.4
  • 15
    • 0027300451 scopus 로고
    • Clinical features of pulmonary disease caused by rapidly growing mycobacteria: analysis of 154 patients
    • Griffith D.E., Girard W.M., Wallace R.J. Clinical features of pulmonary disease caused by rapidly growing mycobacteria: analysis of 154 patients. Am. Rev. Respir. Dis. 1993, 147:1271.
    • (1993) Am. Rev. Respir. Dis. , vol.147 , pp. 1271
    • Griffith, D.E.1    Girard, W.M.2    Wallace, R.J.3
  • 17
    • 77951051763 scopus 로고    scopus 로고
    • Ancient origin and gene mosaicism of the progenitor of Mycobacterium tuberculosis
    • Accessed April 20, 2010
    • Gutierrez M.C., Brisse S., Brosch R., Fabre M., Omais B., Marmiesse M., Supply P., Vincent V. Ancient origin and gene mosaicism of the progenitor of Mycobacterium tuberculosis. PlOS Pathogens 2005, 1:55-61. Accessed April 20, 2010. http://www.plospathogens.org.
    • (2005) PlOS Pathogens , vol.1 , pp. 55-61
    • Gutierrez, M.C.1    Brisse, S.2    Brosch, R.3    Fabre, M.4    Omais, B.5    Marmiesse, M.6    Supply, P.7    Vincent, V.8
  • 18
    • 0036084147 scopus 로고    scopus 로고
    • RIDOM: ribosomal differentiation of medical micro-organisms database
    • Harmsen D., Rothgänger J., Frosch M., Albert J. RIDOM: ribosomal differentiation of medical micro-organisms database. Nucleic Acids Res. 2002, 30:416-417.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 416-417
    • Harmsen, D.1    Rothgänger, J.2    Frosch, M.3    Albert, J.4
  • 19
    • 2442679157 scopus 로고    scopus 로고
    • RIDOM: comprehensive and public sequence database for identification of Mycobacterium species
    • Accessed April 20, 2010
    • Harmsen D., Dostal S., Roth A., Niemann S., Rothgänger J., Sammeth M., Albert J., Frosch M., Richter E. RIDOM: comprehensive and public sequence database for identification of Mycobacterium species. BMC Inf. Dis. 2003, 3:26. Accessed April 20, 2010. http://www.biomedcentral.com/1471-2334/3/26.
    • (2003) BMC Inf. Dis. , vol.3 , pp. 26
    • Harmsen, D.1    Dostal, S.2    Roth, A.3    Niemann, S.4    Rothgänger, J.5    Sammeth, M.6    Albert, J.7    Frosch, M.8    Richter, E.9
  • 22
  • 23
    • 33751302297 scopus 로고    scopus 로고
    • Mycobacterium kumamotonense sp. nov. Recovered from clinical specimen and the first isolation report of Mycobacterium arupense in Japan: novel slowly growing, nonchromogenic clinical isolates related to Mycobacterium terrae complex
    • Masaki T., Ohkusu K., Hata H., Fujiwara N., Lihara H., Yamada-Noda M., Nhung P.H., Hayashi M., Asano Y., Kawamura Y., Ezaki T. Mycobacterium kumamotonense sp. nov. Recovered from clinical specimen and the first isolation report of Mycobacterium arupense in Japan: novel slowly growing, nonchromogenic clinical isolates related to Mycobacterium terrae complex. Microbiol. Immunol. 2006, 50:889-897.
    • (2006) Microbiol. Immunol. , vol.50 , pp. 889-897
    • Masaki, T.1    Ohkusu, K.2    Hata, H.3    Fujiwara, N.4    Lihara, H.5    Yamada-Noda, M.6    Nhung, P.H.7    Hayashi, M.8    Asano, Y.9    Kawamura, Y.10    Ezaki, T.11
  • 24
    • 3142774875 scopus 로고    scopus 로고
    • Assessment of partial sequencing of the 65-kilodalton heat shock protein gene (hsp65) for routine identification of Mycobacterium species isolated from clinical sources
    • McNabb A., Eisler D., Adie K., Amos M., Rodrigues M., Stephens G., Black G.W.A., Isaac-Renton J. Assessment of partial sequencing of the 65-kilodalton heat shock protein gene (hsp65) for routine identification of Mycobacterium species isolated from clinical sources. J. Clin. Microbiol. 2004, 42:3000-3011.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 3000-3011
    • McNabb, A.1    Eisler, D.2    Adie, K.3    Amos, M.4    Rodrigues, M.5    Stephens, G.6    Black, G.W.A.7    Isaac-Renton, J.8
  • 25
    • 9744235803 scopus 로고    scopus 로고
    • Mycobacterium nebraskense sp. nov., a novel slowly growing scotochromogenic species
    • Mohamed A.M., Iwen P.C., Tarantolo S., Hinrichs S.H. Mycobacterium nebraskense sp. nov., a novel slowly growing scotochromogenic species. Int. J. Syst. Evol. Microbiol 2004, 54:2057-2060.
    • (2004) Int. J. Syst. Evol. Microbiol , vol.54 , pp. 2057-2060
    • Mohamed, A.M.1    Iwen, P.C.2    Tarantolo, S.3    Hinrichs, S.H.4
  • 26
    • 45149086948 scopus 로고    scopus 로고
    • Strategy for the detection and differentiation of Mycobacterium avium species in isolates and heavily infected tissues
    • Moravkova M., Hlozek P., Beran V., Pavlik I., Preziuso S., Cuteri V., Bartos M. Strategy for the detection and differentiation of Mycobacterium avium species in isolates and heavily infected tissues. Research in Veterinary Science 2008, 85:257-264.
    • (2008) Research in Veterinary Science , vol.85 , pp. 257-264
    • Moravkova, M.1    Hlozek, P.2    Beran, V.3    Pavlik, I.4    Preziuso, S.5    Cuteri, V.6    Bartos, M.7
  • 28
    • 33749026348 scopus 로고    scopus 로고
    • Mycobacterium colombiense sp. nov., a novel member of the Mycobacterium avium complex and description of MAC-X as a new ITS genetic variant
    • Murcia M.I., Tortoli E., Menendez M.C., Palenque E., Garcia M.J. Mycobacterium colombiense sp. nov., a novel member of the Mycobacterium avium complex and description of MAC-X as a new ITS genetic variant. Int. J. Syst. Evol. Microbiol 2006, 56:2049-2054.
    • (2006) Int. J. Syst. Evol. Microbiol , vol.56 , pp. 2049-2054
    • Murcia, M.I.1    Tortoli, E.2    Menendez, M.C.3    Palenque, E.4    Garcia, M.J.5
  • 29
    • 0025950825 scopus 로고
    • Chronic tenosynovitis of the hand due to Mycobacterium nonchromogenicum: use of high performance liquid chromatography for identification of isolates
    • Ridderhof J.C., Wallace R.J., Kilburn J.O., Butler W.R., Warren N.G., Tsukamura M., Steele L.C., Wong E.S. Chronic tenosynovitis of the hand due to Mycobacterium nonchromogenicum: use of high performance liquid chromatography for identification of isolates. Rev. Infect. Dis. 1991, 13:857-864.
    • (1991) Rev. Infect. Dis. , vol.13 , pp. 857-864
    • Ridderhof, J.C.1    Wallace, R.J.2    Kilburn, J.O.3    Butler, W.R.4    Warren, N.G.5    Tsukamura, M.6    Steele, L.C.7    Wong, E.S.8
  • 30
    • 0025005094 scopus 로고
    • Differentiation of mycobacterial species by direct sequencing of amplified RNA
    • Rogall T., Flohr T., Böttger E.C. Differentiation of mycobacterial species by direct sequencing of amplified RNA. J. Gen. Microbiol. 1990, 136:1915-1920.
    • (1990) J. Gen. Microbiol. , vol.136 , pp. 1915-1920
    • Rogall, T.1    Flohr, T.2    Böttger, E.C.3
  • 33
    • 33645946043 scopus 로고    scopus 로고
    • Occurrence of overlooked zoonotic tuberculosis: detection of Mycobacterium bovis in human cerebrospinal fluid
    • Shah N.P., Singhal A., Jain A., Kumar P., Uppal S.S., Srivatsava M.V.P., Prasad H.K. Occurrence of overlooked zoonotic tuberculosis: detection of Mycobacterium bovis in human cerebrospinal fluid. J. Clin. Microbiol. 2006, 44:1352-1358.
    • (2006) J. Clin. Microbiol. , vol.44 , pp. 1352-1358
    • Shah, N.P.1    Singhal, A.2    Jain, A.3    Kumar, P.4    Uppal, S.S.5    Srivatsava, M.V.P.6    Prasad, H.K.7
  • 34
    • 0028916737 scopus 로고
    • Phylogeny of the Mycobacterium chelonae-like organism based on partial sequencing of the 16S rRNA gene and proposal of Mycobacterium mucogenicum sp. nov
    • Springer B., Bottger E.C., Kirschner P., Wallace R.J. Phylogeny of the Mycobacterium chelonae-like organism based on partial sequencing of the 16S rRNA gene and proposal of Mycobacterium mucogenicum sp. nov. Int. J. Syst. Bacteriol. 1995, 45:262-267.
    • (1995) Int. J. Syst. Bacteriol. , vol.45 , pp. 262-267
    • Springer, B.1    Bottger, E.C.2    Kirschner, P.3    Wallace, R.J.4
  • 37
    • 33751258603 scopus 로고    scopus 로고
    • The bacterial species dilemma and the genomic-phylogenetic species concept
    • Staley J.T. The bacterial species dilemma and the genomic-phylogenetic species concept. Phil. Trans. R. Soc. B. 2006, 361:1899-1909.
    • (2006) Phil. Trans. R. Soc. B. , vol.361 , pp. 1899-1909
    • Staley, J.T.1
  • 38
    • 33846054258 scopus 로고    scopus 로고
    • Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer
    • Stinear T.P., Seemann T., Pidot S., Frigui W., Reysset G., Garnier T., Meurice G., Simon D., Bouchier C., et al. Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer. Genome Res 2007, 17:192-200.
    • (2007) Genome Res , vol.17 , pp. 192-200
    • Stinear, T.P.1    Seemann, T.2    Pidot, S.3    Frigui, W.4    Reysset, G.5    Garnier, T.6    Meurice, G.7    Simon, D.8    Bouchier, C.9
  • 39
    • 0025324055 scopus 로고
    • Numerical taxonomy of mycobactin-dependent mycobacteria, emended description of Mycobacterium avium, and description of Mycobacterium avium subsp. avium subsp. nov., Mycobacterium avium subsp. paratuberculosis subsp. nov., and Mycobacterium avium subsp. silvaticum subsp. nov
    • Thorel M.F., Krichevsky M., Lévy-Frébault V.V. Numerical taxonomy of mycobactin-dependent mycobacteria, emended description of Mycobacterium avium, and description of Mycobacterium avium subsp. avium subsp. nov., Mycobacterium avium subsp. paratuberculosis subsp. nov., and Mycobacterium avium subsp. silvaticum subsp. nov. Int. J. Syst. Bacteriol. 1990, 40:254-260.
    • (1990) Int. J. Syst. Bacteriol. , vol.40 , pp. 254-260
    • Thorel, M.F.1    Krichevsky, M.2    Lévy-Frébault, V.V.3
  • 43
    • 0034798093 scopus 로고    scopus 로고
    • Necessity of quality controlled 16S rRNA gene sequence databases: identifying nontuberculous Mycobacterium species
    • Turenne C.Y., Tschetter L., Wolfe J., Kabani A. Necessity of quality controlled 16S rRNA gene sequence databases: identifying nontuberculous Mycobacterium species. J. Clin. Microbiol. 2001, 39:3637-3648.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 3637-3648
    • Turenne, C.Y.1    Tschetter, L.2    Wolfe, J.3    Kabani, A.4
  • 44
    • 5444227022 scopus 로고    scopus 로고
    • Mycobacterium parascrofulaceum sp. nov., novel slowly growing scotochromogenic clinical isolates related to Mycobacterium simiae
    • Turenne C.Y., Cook V.J., Burdz T.V., Pauls R.J., Thibert L., Wolfe J.N., Kabani A. Mycobacterium parascrofulaceum sp. nov., novel slowly growing scotochromogenic clinical isolates related to Mycobacterium simiae. Int. J. Syst. Evol. Microbiol 2004, 54:1543-1551.
    • (2004) Int. J. Syst. Evol. Microbiol , vol.54 , pp. 1543-1551
    • Turenne, C.Y.1    Cook, V.J.2    Burdz, T.V.3    Pauls, R.J.4    Thibert, L.5    Wolfe, J.N.6    Kabani, A.7
  • 48
    • 0027362899 scopus 로고
    • Clinical significance, biochemical features, and susceptibility patterns of sporadic isolates of the Mycobacterium chelonae-like organism
    • Wallace R.J., Silcox V.A., Tsukamura M., Brown B.A., Kilburn J.O., Butler W.R., Onyi G.r.a.c.e. Clinical significance, biochemical features, and susceptibility patterns of sporadic isolates of the Mycobacterium chelonae-like organism. J. Clin. Microbiol. 1993, 31:3231-3239.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 3231-3239
    • Wallace, R.J.1    Silcox, V.A.2    Tsukamura, M.3    Brown, B.A.4    Kilburn, J.O.5    Butler, W.R.6    Onyi, G.7
  • 50
    • 0026527471 scopus 로고
    • Agents of newly recognized or infrequently encountered mycobacterial diseases
    • Wayne L.G., Sramek H.A. Agents of newly recognized or infrequently encountered mycobacterial diseases. Clin. Microbiol. Rev 1992, 5:1-25.
    • (1992) Clin. Microbiol. Rev , vol.5 , pp. 1-25
    • Wayne, L.G.1    Sramek, H.A.2
  • 53
    • 0034802312 scopus 로고    scopus 로고
    • Mycobacterium immunogenum sp. nov., a novel species related to Mycobacterium abscessus and associated with clinical disease, pseudo-outbreaks and contaminated metal working fluids: an international cooperative study on mycobacterial taxonomy
    • Wilson R.W., Steingrube V.A., Bottger E.C., Springer B., Brown-Elliott B.A., Vincent V., Jost K.C., Zhang Y., Garcia M.J., Chiu S.H., Wallace R.J. Mycobacterium immunogenum sp. nov., a novel species related to Mycobacterium abscessus and associated with clinical disease, pseudo-outbreaks and contaminated metal working fluids: an international cooperative study on mycobacterial taxonomy. Int. J. Syst. Evol. Microbiol 2001, 51:1751-1764.
    • (2001) Int. J. Syst. Evol. Microbiol , vol.51 , pp. 1751-1764
    • Wilson, R.W.1    Steingrube, V.A.2    Bottger, E.C.3    Springer, B.4    Brown-Elliott, B.A.5    Vincent, V.6    Jost, K.C.7    Zhang, Y.8    Garcia, M.J.9    Chiu, S.H.10    Wallace, R.J.11


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